CV090575 | GDV

EST Overview


Name	CV090575
Unique Name	CV090575
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	641

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090575 vs. DB:swissprot:display
Match: PSD13_RAT (26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.748e-10
Identity = 40/138 (28.99%), Postives = 66/138 (47.83%), Query Frame = 3

Query:   84 PXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDI 497
            P  A  +  L +LY K+LWHQLTL +           GD LI+ Y NFI++F+ ++N L L      V RQ ++   A+T LE    K+ +      +E ++  K  I    +  G  +  K  ++D +  L+ +  +
Sbjct:   16 PGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGV 148

[Close]

BLAST of CV090575 vs. DB:swissprot:display
Match: PSD13_MOUSE (26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus GN=Psmd13 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.748e-10
Identity = 40/138 (28.99%), Postives = 66/138 (47.83%), Query Frame = 3

Query:   84 PXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDI 497
            P  A  +  L +LY K+LWHQLTL +           GD LI+ Y NFI++F+ ++N L L      V RQ ++   A+T LE    K+ +      +E ++  K  I    +  G  +  K  ++D +  L+ +  +
Sbjct:   16 PGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGV 148

[Close]

BLAST of CV090575 vs. DB:swissprot:display
Match: PSD13_HUMAN (26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.122e-10
Identity = 40/135 (29.63%), Postives = 66/135 (48.89%), Query Frame = 3

Query:   93 AEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDI 497
            A W+  L +LY K+LWHQLTL +           GD LI+ Y NFI++F+ ++N L L      V RQ ++   A+T LE    K+ +      +E ++  K  I    +  G  +  K  ++D +  L+ +  +
Sbjct:   20 AVWHR-LEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGV 148

[Close]

BLAST of CV090575 vs. DB:swissprot:display
Match: PSD13_CHICK (26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.122e-10
Identity = 39/138 (28.26%), Postives = 67/138 (48.55%), Query Frame = 3

Query:   84 PXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDI 497
            P  A  +  L +LY+K+LWHQLTL +           GD LI+ Y NFI++F+ ++N L L      V RQ ++   A+T LE    K+ +      +E ++  K  I    +  G  +  K  +++ +  L+ +  +
Sbjct:   16 PGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEEVEEMLNNLPGV 148

[Close]

BLAST of CV090575 vs. DB:swissprot:display
Match: PSD13_BOVIN (26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus GN=PSMD13 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.364e-9
Identity = 39/138 (28.26%), Postives = 65/138 (47.10%), Query Frame = 3

Query:   84 PXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDI 497
            P  A  +  L +LY K+LWHQLTL +           GD LI+ Y NFI++F+ ++N L L      V RQ ++   A++ LE    K+ +      +E ++  K  I    +  G  +  K  ++D +  L  +  +
Sbjct:   16 PGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSNLPGV 148

[Close]

BLAST of CV090575 vs. DB:swissprot:display
Match: PSD13_DICDI (26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 7.719e-9
Identity = 38/142 (26.76%), Postives = 59/142 (41.55%), Query Frame = 3

Query:   84 PXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXP---KECKILLDDGKSTLDXMTDID 500
            P L++    + D Y  +LWHQLT  +E             L   Y NFI DF+ K+  L L      V+RQ    E+    +E +  K+      + +   +     IA  N+  G     ++CK  L+  K  L  +T +D
Sbjct:   18 PDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIRDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKV-----KKDKSAYILTLSYIANMNLRSGVAEQLQDCKKTLELAKEELQGVTGLD 153

HSP 2 Score: 28.4906 bits (62), Expect = 7.719e-9
Identity = 10/27 (37.04%), Postives = 19/27 (70.37%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLS 624
            H ++ + +E Y  AL+YL+Y  +E++S
Sbjct:  168 HMAKSQASEFYKNALMYLSYCKLETIS 194

[Close]

BLAST of CV090575 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s01760.1 ()

HSP 1 Score: 196.052 bits (497), Expect = 5.517e-58
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ +E +AAI+ LE VI KL A  E RIEEP+LYIKM IA+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELDEWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYTEKDAAISYLEGVIEKLRATREQRIEEPVLYIKMQIAIFKLEQGDQKECKRLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 46.595 bits (109), Expect = 5.517e-58
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            +K RQE +E Y  ALLYLAY SVESLSDSF+L
Sbjct:  168 YKHRQEFSEFYKSALLYLAYTSVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s09720.1 ()

HSP 1 Score: 195.667 bits (496), Expect = 1.594e-57
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSR+ +E EAAI+ LE VI KL A  E RIEEP+LYIKM IA+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELDEWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVIVSRRYAEKEAAISYLEGVIEKLRATREQRIEEPVLYIKMQIAIFKLEQGDQKECKKLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 45.4394 bits (106), Expect = 1.594e-57
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            +K RQE A+ Y  ALLYLAY +VESLSDSF+L
Sbjct:  168 YKHRQEFADFYKSALLYLAYTAVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. P. persica 1.0 peptide
Match: ppa007016m ()

HSP 1 Score: 193.356 bits (490), Expect = 8.644e-58
Identity = 99/141 (70.21%), Postives = 109/141 (77.30%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L++WY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ  E EAAI  LE VI KL A  E RIEEPILYIKM IA+  +E+   KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKEAAINYLEGVIEKLQATREQRIEEPILYIKMQIAIFKLEQEDQKECKKLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 48.1358 bits (113), Expect = 8.644e-58
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE AE Y  ALLYLAY SVESLS+SF+L
Sbjct:  168 HKFRQEFAEFYKSALLYLAYTSVESLSESFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: B9RZ27|B9RZ27_RICCO (26S proteasome subunit, putative OS=Ricinus communis GN=RCOM_1316800 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.369e-56
Identity = 98/141 (69.50%), Postives = 112/141 (79.43%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP LAEWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFI+DF+ KINLLKLAHFA IVSRQ  E EAAI+ L+ VI KL A  E+RI+EPILYIKM +A+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELAEWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFISDFETKINLLKLAHFAVIVSRQYKEKEAAISYLQGVIEKLIATRELRIDEPILYIKMQLAILKLEQGDQKECKKLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 48.521 bits (114), Expect = 2.369e-56
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE AE Y  +LLYLAY SVESLSDSF+L
Sbjct:  168 HKYRQEFAEFYKSSLLYLAYTSVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: B9MU88|B9MU88_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826642 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 6.847e-56
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ +E +AAI+ LE VI KL A  E RIEEP+LYIKM IA+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELDEWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYTEKDAAISYLEGVIEKLRATREQRIEEPVLYIKMQIAIFKLEQGDQKECKRLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 46.595 bits (109), Expect = 6.847e-56
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            +K RQE +E Y  ALLYLAY SVESLSDSF+L
Sbjct:  168 YKHRQEFSEFYKSALLYLAYTSVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: B9GZK9|B9GZK9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646311 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.978e-55
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSR+ +E EAAI+ LE VI KL A  E RIEEP+LYIKM IA+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELDEWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVIVSRRYAEKEAAISYLEGVIEKLRATREQRIEEPVLYIKMQIAIFKLEQGDQKECKKLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 45.4394 bits (106), Expect = 1.978e-55
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            +K RQE A+ Y  ALLYLAY +VESLSDSF+L
Sbjct:  168 YKHRQEFADFYKSALLYLAYTAVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: C6TJL2|C6TJL2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.383e-55
Identity = 98/141 (69.50%), Postives = 109/141 (77.30%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L++WY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ SE EAA+  L  VI KL    E RIEEPILYIKM IA+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYSEKEAAVGYLGGVIQKLQDTREQRIEEPILYIKMQIAIFKLEQGDQKECKKLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 47.7506 bits (112), Expect = 4.383e-55
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK+ QE AE Y  ALLYLAY SVESLSDSF+L
Sbjct:  168 HKTCQEFAEFYKSALLYLAYTSVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: C6THL8|C6THL8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.383e-55
Identity = 96/141 (68.09%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L++WY +L+DLY  +LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ +E EAA+  L  VI KL    E RIEEPILYIKM IA+  +E+G  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELSDWYNSLADLYQNKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYAEKEAAVGYLGGVIQKLQDTREQRIEEPILYIKMQIAILKLEQGDQKECKKLLEDGKSTLDSMTDIDP 154

HSP 2 Score: 50.8322 bits (120), Expect = 4.383e-55
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK+RQE AE Y  ALLYLAY SVESLSDSF+L
Sbjct:  168 HKTRQEFAEFYKSALLYLAYTSVESLSDSFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: D7TTN2|D7TTN2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013003001 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.738e-55
Identity = 100/141 (70.92%), Postives = 110/141 (78.01%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP LAEWY +L+DLY ++LWHQLTL LEQ   L    AGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ +E EAA+  LE VI KL    E+RIEEPILYIKM IAV N+EKG  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELAEWYNSLADLYQRKLWHQLTLKLEQFVALA---AGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYTEKEAAVRYLEGVIEKLRGTRELRIEEPILYIKMQIAVFNLEKGDQKECKKLLEDGKSTLDSMTDIDP 151

HSP 2 Score: 46.9802 bits (110), Expect = 5.738e-55
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            +KSRQE AE Y  ALLYLAY SVESLS++F+L
Sbjct:  165 YKSRQEFAEFYKSALLYLAYTSVESLSETFKL 196

[Close]

BLAST of CV090575 vs. TrEMBL
Match: D7MTD6|D7MTD6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494422 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.050e-53
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA +VSRQ SE EAA++ LE VI KL A  E RI EPI+YI+   A+  +E+G  KECK +LDDGKS+LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIETQKALFKLEQGDQKECKKILDDGKSSLDSMTDIDP 154

HSP 2 Score: 46.595 bits (109), Expect = 3.050e-53
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HKSRQE ++ Y  ALLYLAY SVE LS+SF+L
Sbjct:  168 HKSRQEFSDFYKSALLYLAYTSVEDLSESFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: Q8RWF0|Q8RWF0_ARATH (26S proteasome subunit RPN9a OS=Arabidopsis thaliana GN=RPN9a PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.148e-52
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA +VSRQ SE EAA++ LE VI KL A  E RI EPI+YI+   A+  +E+G  KECK +LDDGKS+LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIETQKALFKLEQGDQKECKKILDDGKSSLDSMTDIDP 154

HSP 2 Score: 44.669 bits (104), Expect = 1.148e-52
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE ++ Y  ALLYLAY SVE LS+SF+L
Sbjct:  168 HKCRQEFSDFYKSALLYLAYTSVEDLSESFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: D7MGW6|D7MGW6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914767 PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.148e-52
Identity = 93/141 (65.96%), Postives = 106/141 (75.18%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ +INLLKLAHFA +VSRQ  E EAA++ LE VI KL A  E RI EPI YI+  IA+  +E+G  KECK +LDDGKS LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYNNFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIETQIALFKLEQGDQKECKKILDDGKSLLDSMTDIDP 154

HSP 2 Score: 46.9802 bits (110), Expect = 1.148e-52
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE +E Y  ALLYLAY SVESLS+SF+L
Sbjct:  168 HKFRQEFSEFYKNALLYLAYTSVESLSESFKL 199

[Close]

BLAST of CV090575 vs. TrEMBL
Match: Q9FK79|Q9FK79_ARATH (26S proteasome subunit-like protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.149e-52
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA +VSRQ SE EAA++ LE VI KL A  E RI EPI+YI+   A+  +E+G  KECK +LDDGKS+LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIETQKALFKLEQGDQKECKKILDDGKSSLDSMTDIDP 154

HSP 2 Score: 44.669 bits (104), Expect = 1.149e-52
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE ++ Y  ALLYLAY SVE LS+SF+L
Sbjct:  168 HKCRQEFSDFYKSALLYLAYTSVEDLSESFKL 199

[Close]

BLAST of CV090575 vs. Vitis vinifera peptide
Match: GSVIVT01013003001 (assembled CDS)

HSP 1 Score: 192.586 bits (488), Expect = 2.825e-57
Identity = 100/141 (70.92%), Postives = 110/141 (78.01%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP LAEWY +L+DLY ++LWHQLTL LEQ   L    AGDALIQ Y NFITDF+ KINLLKLAHFA IVSRQ +E EAA+  LE VI KL    E+RIEEPILYIKM IAV N+EKG  KECK LL+DGKSTLD MTDIDP
Sbjct:   14 HPELAEWYNSLADLYQRKLWHQLTLKLEQFVALA---AGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYTEKEAAVRYLEGVIEKLRGTRELRIEEPILYIKMQIAVFNLEKGDQKECKKLLEDGKSTLDSMTDIDP 151

HSP 2 Score: 46.9802 bits (110), Expect = 2.825e-57
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            +KSRQE AE Y  ALLYLAY SVESLS++F+L
Sbjct:  165 YKSRQEFAEFYKSALLYLAYTSVESLSETFKL 196

[Close]

BLAST of CV090575 vs. TAIR peptide
Match: AT5G45620.1 (| Symbols: | Proteasome component (PCI) domain protein | chr5:18501590-18503868 FORWARD LENGTH=386)

HSP 1 Score: 187.193 bits (474), Expect = 8.144e-55
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA +VSRQ SE EAA++ LE VI KL A  E RI EPI+YI+   A+  +E+G  KECK +LDDGKS+LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIETQKALFKLEQGDQKECKKILDDGKSSLDSMTDIDP 154

HSP 2 Score: 44.669 bits (104), Expect = 8.144e-55
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE ++ Y  ALLYLAY SVE LS+SF+L
Sbjct:  168 HKCRQEFSDFYKSALLYLAYTSVEDLSESFKL 199

[Close]

BLAST of CV090575 vs. TAIR peptide
Match: AT5G45620.2 (| Symbols: | Proteasome component (PCI) domain protein | chr5:18501590-18503422 FORWARD LENGTH=350)

HSP 1 Score: 187.193 bits (474), Expect = 8.152e-55
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ KINLLKLAHFA +VSRQ SE EAA++ LE VI KL A  E RI EPI+YI+   A+  +E+G  KECK +LDDGKS+LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIETQKALFKLEQGDQKECKKILDDGKSSLDSMTDIDP 154

HSP 2 Score: 44.669 bits (104), Expect = 8.152e-55
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE ++ Y  ALLYLAY SVE LS+SF+L
Sbjct:  168 HKCRQEFSDFYKSALLYLAYTSVEDLSESFKL 199

[Close]

BLAST of CV090575 vs. TAIR peptide
Match: AT4G19006.1 (| Symbols: | Proteasome component (PCI) domain protein | chr4:10409349-10411347 REVERSE LENGTH=386)

HSP 1 Score: 184.882 bits (468), Expect = 1.804e-54
Identity = 93/141 (65.96%), Postives = 106/141 (75.18%), Query Frame = 3

Query:   81 HPXLAEWYXTLSDLYHKELWHQLTLXLEQXXXLXVXQAGDALIQXYXNFITDFQXKINLLKLAHFAXIVSRQXSEXEAAITNLEDVIXKLXAXXEMRIEEPILYIKMXIAVXNIEKGXPKECKILLDDGKSTLDXMTDIDP 503
            HP L EWY +L+DLY K+LWHQLTL LEQ   L V QAGDALIQ Y NFITDF+ +INLLKLAHFA +VSRQ  E EAA++ LE VI KL A  E RI EPI YI+  IA+  +E+G  KECK +LDDGKS LD MTDIDP
Sbjct:   14 HPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYNNFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIETQIALFKLEQGDQKECKKILDDGKSLLDSMTDIDP 154

HSP 2 Score: 45.8246 bits (107), Expect = 1.804e-54
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1

Query:  544 HKSRQEXAEXYXXALLYLAYXSVESLSDSFEL 639
            HK RQE +E Y  ALLYLAY SV+SLS+SF+L
Sbjct:  168 HKVRQEFSEFYKNALLYLAYTSVDSLSESFKL 199

The following BLAST results are available for this feature:

BLAST of CV090575 vs. DB:swissprot:display
BLAST of CV090575 vs. Populus trichocarpa peptide v2.0
BLAST of CV090575 vs. P. persica 1.0 peptide
BLAST of CV090575 vs. TrEMBL
BLAST of CV090575 vs. Vitis vinifera peptide
BLAST of CV090575 vs. TAIR peptide

BLAST of CV090575 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
PSD13_RAT	2.748e-10	28.99	26S proteasome non-ATPase regulatory subunit 13 OS...	[more]
PSD13_MOUSE	2.748e-10	28.99	26S proteasome non-ATPase regulatory subunit 13 OS...	[more]
PSD13_HUMAN	6.122e-10	29.63	26S proteasome non-ATPase regulatory subunit 13 OS...	[more]
PSD13_CHICK	6.122e-10	28.26	26S proteasome non-ATPase regulatory subunit 13 OS...	[more]
PSD13_BOVIN	1.364e-9	28.26	26S proteasome non-ATPase regulatory subunit 13 OS...	[more]
PSD13_DICDI	7.719e-9	26.76	26S proteasome non-ATPase regulatory subunit 13 OS...	[more]

BLAST of CV090575 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0001s01760.1	5.517e-58	70.21		[more]
POPTR_0003s09720.1	1.594e-57	70.21		[more]

BLAST of CV090575 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa007016m	8.644e-58	70.21		[more]

BLAST of CV090575 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9RZ27\|B9RZ27_RICCO	2.369e-56	69.50	26S proteasome subunit, putative OS=Ricinus commun...	[more]
B9MU88\|B9MU88_POPTR	6.847e-56	70.21	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GZK9\|B9GZK9_POPTR	1.978e-55	70.21	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6TJL2\|C6TJL2_SOYBN	4.383e-55	69.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6THL8\|C6THL8_SOYBN	4.383e-55	68.09	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TTN2\|D7TTN2_VITVI	5.738e-55	70.92	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7MTD6\|D7MTD6_ARALY	3.050e-53	66.67	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q8RWF0\|Q8RWF0_ARATH	1.148e-52	66.67	26S proteasome subunit RPN9a OS=Arabidopsis thalia...	[more]
D7MGW6\|D7MGW6_ARALY	1.148e-52	65.96	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9FK79\|Q9FK79_ARATH	1.149e-52	66.67	26S proteasome subunit-like protein OS=Arabidopsis...	[more]

BLAST of CV090575 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01013003001	2.825e-57	70.92	assembled CDS	[more]

BLAST of CV090575 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G45620.1	8.144e-55	66.67	\| Symbols: \| Proteasome component (PCI) domain pr...	[more]
AT5G45620.2	8.152e-55	66.67	\| Symbols: \| Proteasome component (PCI) domain pr...	[more]
AT4G19006.1	1.804e-54	65.96	\| Symbols: \| Proteasome component (PCI) domain pr...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 14..38 score: NAcoord: 42..62 score
None	No IPR available	SEG	seg	seg	coord: 24..45 score
None	No IPR available	SEG	seg	seg	coord: 45..64 score
None	No IPR available	PANTHER	PTHR10539	26S PROTEASOME SUBUNIT	coord: 14..168 score: 3
None	No IPR available	SEG	seg	seg	coord: 38..53 score: NAcoord: 158..170 score
None	No IPR available	SEG	seg	seg	coord: 4..21 score
None	No IPR available	SEG	seg	seg	coord: 36..56 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090575 ID=CV090575; Name=CV090575; organism=Vaccinium corymbosum; type=EST; length=641bp
GAAATCTNCTCTCCCNCCTCGCTCTCAAGTAGAGCCATGGNGAGTCTATT
GCANTACACTCGATTCTCTGCGCAACACGCCATCCANAGCTAGCCGAATG
GTACANCACCCTCTCAGATCTGTACCACAAGGAGCTCTGGCATCAGCTCA
CTCTCANGCTCGAACAGNTCGNCNCTCTCGNCGTGNTTCAAGCTGGTGAT
GCTCTCATACAGNTGTATCANAACTTCATCACTGATTTCCAGANCAAGAT
CAATCTTCTCAAGCTTGCNCATTTTGCTGNTATAGTNTCTCGGCAGTANT
CAGAGAANGAAGCTGCCATTACTAACCTGGAAGATGTTATTGANAAGCTT
CNTGCTNCTANAGAGATGCGCATTGAGGAACCNATTCTTTATATAAAGAT
GCANATTGCTGTCTNCAATATTGAGAAAGGCNNNCCAAAAGAGTGCAAGA
TACTTCTTGACGACGGNAAGAGTACACTTGACNCTATGACTGACATTGAT
CCATCTGTGTATGCCAGCTATTATTGGGTTTCATCTCANANACCATAAAT
CTCGNCAGGAGNTTGCTGAGNTTTACANAANNGCTCTTCTNTATCTAGCA
TATNCCTCAGTGGAGTCNCTATCGGACTCATTTGAGCTGGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated