CV090773

EST Overview
NameCV090773
Unique NameCV090773
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length720
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CV090773 vs. DB:swissprot:display
Match: RQSIM_ARATH (ATP-dependent DNA helicase Q-like SIM OS=Arabidopsis thaliana GN=RECQSIM PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.745e-34
Identity = 91/213 (42.72%), Postives = 122/213 (57.28%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVG-PSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTS-CSSHRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S DQ++ +++ MGFE  D  EAVKAVG  S + AVEYIL G+ R                 +LGKR + +S  SS   RQS++ +H +S  + K+ K D    V +  SQL  E + E  E      +   +    F +  L     +    WE +V  +L   FG SSL+SFQ++A++ W+A +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    4 SSDQLVMKIVEMGFEKLDALEAVKAVGGKSCDDAVEYILKGNHRTGGFKPASLLCSSGSNKILGKRAMPSSFSSSESKRQSSLLDHFRSVNQNKK-KGDTFGTVEVD-SQL--ETVSEHSEEVRKSLAPVFMESSCFPEGQLLNGCSEASSSWEKRVNSILRNRFGISSLRSFQREALSTWVAHKDCLVLAATGSGKSLCFQIPALLTGKVVV 212
[Close]
BLAST of CV090773 vs. DB:swissprot:display
Match: RECQ_ECOLI (ATP-dependent DNA helicase recQ OS=Escherichia coli (strain K12) GN=recQ PE=1 SV=5)

HSP 1 Score: 56.6102 bits (135), Expect = 1.567e-7
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 2 
Query:  539 ELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            E   K++L + FGY   +  Q++ +   L+ RDCLV+  TG GKSLC+QIPALL   + V
Sbjct:   10 ESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTV 69
[Close]
BLAST of CV090773 vs. DB:swissprot:display
Match: RQL3_ARATH (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.558e-7
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            KLL  HFG++  +  Q +A+ A ++ RDC  L  TG GKS+C+QIPAL    +V+
Sbjct:   26 KLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVL 80
[Close]
BLAST of CV090773 vs. DB:swissprot:display
Match: RECQ_SALTY (ATP-dependent DNA helicase recQ OS=Salmonella typhimurium GN=recQ PE=3 SV=3)

HSP 1 Score: 54.6842 bits (130), Expect = 5.953e-7
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 2 
Query:  539 ELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            E   K++L + FGY   +  Q+  +   L+ RDCLV+  TG GKSLC+QIPALL   + V
Sbjct:   10 ESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTV 69
[Close]
BLAST of CV090773 vs. DB:swissprot:display
Match: RECQ_PASMU (ATP-dependent DNA helicase recQ OS=Pasteurella multocida GN=recQ PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 5.953e-7
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 2 
Query:  557 LLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPAL 697
            +LH  FGY S +  Q++ + A L  +D LV+ ATG+GKSLC+QIPAL
Sbjct:   29 VLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPAL 75
[Close]
BLAST of CV090773 vs. DB:swissprot:display
Match: BLM_CHICK (Bloom syndrome protein homolog (Fragment) OS=Gallus gallus GN=BLM PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 7.775e-7
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            K+ H+ FG  S ++ Q +A+ A L   DC +L  TG GKSLC+Q+PA ++  V V
Sbjct:  387 KIFHRKFGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTV 441
[Close]
BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s02650.1 ()

HSP 1 Score: 162.155 bits (409), Expect = 3.046e-40
Identity = 98/212 (46.23%), Postives = 127/212 (59.91%), Query Frame = 2 
Query:   92 DQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGS--RRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSK-TDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            D  + +LI MGFE     +AVK VGPS++ AV+Y+LNGS  R                    GKR LS S  S R RQS+I EH +     KR   + +V DV +SGS++LP  +   +E   +V+   K+           +E++  G DWE +  ++L + FGYSSLK FQK+A+AAW A +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    8 DGTVEKLIEMGFESCAAEQAVKEVGPSLDKAVDYLLNGSSSRNCEGSGAMTSSSECFTSSKSGKRMLSGSAYSGRKRQSSILEHFRLPRSVKRGMLSSDVSDVLVSGSKVLPLSVNGCEESCVSVDCG-KVENAVDGLPVWCKEEMSFGLDWEERANRVLQERFGYSSLKGFQKEALAAWAAHQDCLVLAATGSGKSLCFQIPALLTGKVVV 218
[Close]
BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s15710.1 ()

HSP 1 Score: 61.2326 bits (147), Expect = 7.317e-10
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 2 
Query:  560 LHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            L ++FGY++ +++QK+ +   L +RDCL + ATGSGKSLC+Q+P LL  K  V
Sbjct:    5 LKQYFGYANFRAYQKEVIDQILDKRDCLAVMATGSGKSLCYQVPPLLLEKTAV 57
[Close]
BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s10920.3 ()

HSP 1 Score: 57.7658 bits (138), Expect = 8.090e-9
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            KLL  HFGY   +  Q +A+ A L+ RDC  L  TG GKS+C+QIPAL    +V+
Sbjct:   27 KLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKRGIVL 81
[Close]
BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s10920.1 ()

HSP 1 Score: 57.7658 bits (138), Expect = 8.090e-9
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            KLL  HFGY   +  Q +A+ A L+ RDC  L  TG GKS+C+QIPAL    +V+
Sbjct:   27 KLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKRGIVL 81
[Close]
BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s10340.1 ()

HSP 1 Score: 53.9138 bits (128), Expect = 1.168e-7
Identity = 34/110 (30.91%), Postives = 50/110 (45.45%), Query Frame = 2 
Query:  425 LRESDEPFHAVESNWKINKETFM------------QRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            L E  E  H  +S  K   E +              RS   ED     +W+ +   +    FG  S +  QK+ + A ++ RD LV+ A G GKSLC+Q+PA+L   V +
Sbjct:   28 LLERQEKLHERQSELKFLLEAYKASGTGNSANENASRSSSLEDWSGSFEWDSQADDVRLNIFGIPSYRQNQKEIINAIMSGRDVLVIMAAGGGKSLCYQLPAILRDGVAL 137
[Close]
BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s01970.1 ()

HSP 1 Score: 52.7582 bits (125), Expect = 2.603e-7
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 2 
Query:  497 RSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            RSL  E+L    D+EL    +    FG  + +  Q  A  A +A++DC VL  TG GKSLC+Q+PA L   V V
Sbjct:  161 RSLNYEELQALDDFELANVVI----FGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQLPATLKPGVTV 230
[Close]
BLAST of CV090773 vs. P. persica 1.0 peptide
Match: ppa000740m ()

HSP 1 Score: 191.045 bits (484), Expect = 4.319e-49
Identity = 108/214 (50.47%), Postives = 139/214 (64.95%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNG---SRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S D+VIA+L+ MGFE S V +AVK VGPS + A++YILNG   + R                   GKR L  S  S ++RQS+I EH QS  RPKRSKTD V DV++SGS+++  P+ +  +P   V  + ++  +T        + L+N  DW+ K   LL KHFGYSSLK+FQK+ +AAW+A +D LVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    7 SADEVIAKLLEMGFENSTVKKAVKEVGPSFDDALDYILNGCCSTNRRATRASSTSSSSMRNVKAPGKRPLPASFPSAQIRQSSILEHFQSNSRPKRSKTDGVPDVSVSGSEIVRGPIEQCLKPPSGVNCSVEVLSDTSPL-----DCLENQSDWQKKANSLLQKHFGYSSLKNFQKEVLAAWMAHQDSLVLAATGSGKSLCFQIPALLTGKVVV 215
[Close]
BLAST of CV090773 vs. P. persica 1.0 peptide
Match: ppa002026m ()

HSP 1 Score: 57.3806 bits (137), Expect = 7.453e-9
Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALL--TGKVVV 718
            KLL  HFG+   +  Q DA+ A L+ RDC  L  TG GKS+C+QIPAL   TG V+V
Sbjct:   27 KLLRWHFGHPEFRGKQLDAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKKTGIVLV 83
[Close]
BLAST of CV090773 vs. P. persica 1.0 peptide
Match: ppa001081m ()

HSP 1 Score: 56.6102 bits (135), Expect = 1.271e-8
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 2 
Query:  566 KHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            ++FG+SS + +QKD +   +   D L++ ATGSGKSLC+Q+P L+ GK  V
Sbjct:   10 QYFGFSSFRPYQKDVIDKIIEGNDSLIVMATGSGKSLCYQVPPLVVGKTGV 60
[Close]
BLAST of CV090773 vs. TrEMBL
Match: D7U9T8|D7U9T8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_60.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031124001 PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.780e-45
Identity = 109/210 (51.90%), Postives = 133/210 (63.33%), Query Frame = 2 
Query:   92 DQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSKTDNVCD-VAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            DQVIAELI MGFEFS V EA++ VGPS++ A+E+ILNG  R                  L K  L +S S  +MRQS+I EHLQ  GR KR +T++V + V+  GS++LPE    S  P                     Q++L+ G DW  +V  LLHKHFG  SLKSFQK+A++AWLA +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    9 DQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRSSRGASSNSKCPTSTGKALDKTALISSHSLDQMRQSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLPEL---SALPVCC------------------QQELEIGKDWVQRVNSLLHKHFGILSLKSFQKEALSAWLAHQDCLVLAATGSGKSLCFQIPALLTGKVVV 197
[Close]
BLAST of CV090773 vs. TrEMBL
Match: B9N4H6|B9N4H6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_784763 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.788e-38
Identity = 98/212 (46.23%), Postives = 127/212 (59.91%), Query Frame = 2 
Query:   92 DQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGS--RRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSK-TDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            D  + +LI MGFE     +AVK VGPS++ AV+Y+LNGS  R                    GKR LS S  S R RQS+I EH +     KR   + +V DV +SGS++LP  +   +E   +V+   K+           +E++  G DWE +  ++L + FGYSSLK FQK+A+AAW A +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    8 DGTVEKLIEMGFESCAAEQAVKEVGPSLDKAVDYLLNGSSSRNCEGSGAMTSSSECFTSSKSGKRMLSGSAYSGRKRQSSILEHFRLPRSVKRGMLSSDVSDVLVSGSKVLPLSVNGCEESCVSVDCG-KVENAVDGLPVWCKEEVGFGLDWEERANRVLRERFGYSSLKGFQKEALAAWAAHQDCLVLAATGSGKSLCFQIPALLTGKVVV 218
[Close]
BLAST of CV090773 vs. TrEMBL
Match: D7M5J3|D7M5J3_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489560 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.587e-33
Identity = 89/212 (41.98%), Postives = 119/212 (56.13%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVG-PSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S D V+ +L+ MGFE  D  +AVKAVG  S + AVEYIL G  R                 +LGKR + +S SS   RQS++ +H +S  + K  K  N   +A   SQL  E + ++ +      +   +    F +  L     +    WE +V  +L   FG SSL+SFQ++A++ W+A  DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    4 SSDHVVMKLVEMGFEKLDALDAVKAVGGKSCDDAVEYILKGHDRTGGSAPASSLCSIGSNKILGKRAMPSSFSSGSKRQSSLLDHFRSVDQNK--KKGNTFGIAEVNSQL--ETVSDTSKEQIKSLAPVFLESSCFPETELSNGCSEASSTWETRVNSILQNRFGISSLRSFQREALSTWVAHEDCLVLAATGSGKSLCFQIPALLTGKVVV 211
[Close]
BLAST of CV090773 vs. TrEMBL
Match: Q6Y5A7|Q6Y5A7_BRANA (Putative DNA helicase RecQsim OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.989e-30
Identity = 87/211 (41.23%), Postives = 113/211 (53.55%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S D+V+ +L+ MGF   D  EAVKAVG S   AVEY+L  +                    LGKR L +S SS  MRQS++ +H +S  R K+ K D+     +S      E +R+S        S       T                WE+ V  +L   FG SSL+SFQ++A++ W+A +DCLVLAATGSGKSLCFQ+PALLTGKVVV
Sbjct:    7 SSDEVVMKLVEMGFAKLDALEAVKAVGKSCGDAVEYLLKRTG-GFSSASSLCSAKNNSNKTLGKRALPSSFSSGSMRQSSLFDHFRSVDRNKK-KGDSFGTAVVSDPS---EEMRKSPPLVFTESSGCSEGSST----------------WEISVNSILRNRFGISSLRSFQREALSTWVAHKDCLVLAATGSGKSLCFQLPALLTGKVVV 196
[Close]
BLAST of CV090773 vs. TrEMBL
Match: B9RFA0|B9RFA0_RICCO (DNA helicase, putative OS=Ricinus communis GN=RCOM_1433100 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.420e-27
Identity = 71/134 (52.99%), Postives = 89/134 (66.42%), Query Frame = 2 
Query:  320 STIREHLQSAGRPKRSKTDN-VCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S+  + +   GRPKR ++DN V +V IS S + P  + E +E                   ++ +E+LD G DWE +   LLHKHFGY SLKSFQK+A+AAW+A +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    8 SSAIQAVNKVGRPKRIRSDNNVPEVPISKSGVSPNHVDEVNE-----------------YSTVPKEELDVGLDWESRANGLLHKHFGYLSLKSFQKEALAAWVAHQDCLVLAATGSGKSLCFQIPALLTGKVVV 124
[Close]
BLAST of CV090773 vs. TrEMBL
Match: C0P9E3|C0P9E3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.961e-26
Identity = 87/228 (38.16%), Postives = 118/228 (51.75%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLST------------SCSSHRMRQSTIREHLQSA--GRPKRSKTDNV---CDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S D +IAEL+ MGFEF  ++ AV AVGP     +E +L GS                   V G+  LST            S    R+RQS+I +H+ SA  G  +  +  N+   C  A  G +++P  +    EP    +S         ++ S  + D  +      ++  +L KHFG+S LK+FQK+ + AW A RDC+VLAATGSGKSLCFQIPALLT KVVV
Sbjct:   11 SADGLIAELLDMGFEFDAISAAVGAVGPRRAEVLEVLLGGS-------DARAGQARRGGGVPGRPALSTAQPRPAGRGMKLSNPRGRLRQSSITDHVASATGGGKESGREANISFPCSSAPGGPRVMPVAVDFCSEPGPQSQS--------LVENSTVESDQMD------RISAVLQKHFGFSCLKAFQKEVLDAWSAHRDCIVLAATGSGKSLCFQIPALLTTKVVV 217
[Close]
BLAST of CV090773 vs. TrEMBL
Match: Q6Y5A8|Q6Y5A8_ORYSJ (Putative DNA helicase RecQsim OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.607e-25
Identity = 87/235 (37.02%), Postives = 114/235 (48.51%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSS------------------HRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVE------SNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S D+VIAEL+ MGFEF +++ A+ AVG      +E++L GS                      + T S SC S                   R++QS+I +HL S    +R      C    S S      L  SD+P   V       S  K   +  +  S  + DL +      K+  +L KHFG+S +K FQK+A+ AW A +D LVLAATGSGKSLCFQIPALLT KVVV
Sbjct:   11 SADRVIAELLDMGFEFDEISRAIGAVGTRCADVLEFMLGGSGNGKMKK-------------ASRETRSRSCVSSNAEARPSDDGNKLVNPRKRLKQSSITDHLASNTGCRRGS----CGEKASTSY---PCLAASDDPRAPVAVSADVCSALKPESQFLLANSRSESDLGH------KISAVLRKHFGFSCVKGFQKEALDAWFAHKDSLVLAATGSGKSLCFQIPALLTAKVVV 219
[Close]
BLAST of CV090773 vs. TrEMBL
Match: Q5WN04|Q5WN04_ORYSJ (Os05g0150600 protein OS=Oryza sativa subsp. japonica GN=P0001A07.5 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.607e-25
Identity = 87/235 (37.02%), Postives = 114/235 (48.51%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSS------------------HRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVE------SNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S D+VIAEL+ MGFEF +++ A+ AVG      +E++L GS                      + T S SC S                   R++QS+I +HL S    +R      C    S S      L  SD+P   V       S  K   +  +  S  + DL +      K+  +L KHFG+S +K FQK+A+ AW A +D LVLAATGSGKSLCFQIPALLT KVVV
Sbjct:   11 SADRVIAELLDMGFEFDEISRAIGAVGTRCADVLEFMLGGSGNGKMKK-------------ASRETRSRSCVSSNAEARPSDDGNKLVNPRKRLKQSSITDHLASNTGCRRGS----CGEKASTSY---PCLAASDDPRAPVAVSADVCSALKPESQFLLANSRSESDLGH------KISAVLRKHFGFSCVKGFQKEALDAWFAHKDSLVLAATGSGKSLCFQIPALLTAKVVV 219
[Close]
BLAST of CV090773 vs. TrEMBL
Match: A9TFU5|A9TFU5_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_92210 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.278e-16
Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 2 
Query:  533 DWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            +WE      L K+FG+  LKSFQ++AV AW   RDC VLAATGSGKSLCFQ+PAL+TGKVVV
Sbjct:  216 EWEKAAITALQKYFGHQQLKSFQREAVEAWAENRDCFVLAATGSGKSLCFQLPALMTGKVVV 277
[Close]
BLAST of CV090773 vs. TrEMBL
Match: B9FMH6|B9FMH6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_17142 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.303e-16
Identity = 71/219 (32.42%), Postives = 99/219 (45.21%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSS------------------HRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVE------SNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGK 670
            S D+VIAEL+ MGFEF +++ A+ AVG      +E++L GS                      + T S SC S                   R++QS+I +HL S    +R      C    S S      L  SD+P   V       S  K   +  +  S  + DL +      K+  +L KHFG+S +K FQK+A+ AW A +D LVLAATGSG+
Sbjct:   11 SADRVIAELLDMGFEFDEISRAIGAVGTRCADVLEFMLGGSGNGKMKK-------------ASRETRSRSCVSSNAEARPSDDGNKLVNPRKRLKQSSITDHLASNTGCRRGS----CGEKASTSY---PCLAASDDPRAPVAVSADVCSALKPESQFLLANSRSESDLGH------KISAVLRKHFGFSCVKGFQKEALDAWFAHKDSLVLAATGSGQ 203
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BLAST of CV090773 vs. Vitis vinifera peptide
Match: GSVIVT01031124001 (assembled CDS)

HSP 1 Score: 184.111 bits (466), Expect = 4.505e-47
Identity = 109/210 (51.90%), Postives = 133/210 (63.33%), Query Frame = 2 
Query:   92 DQVIAELIGMGFEFSDVAEAVKAVGPSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTSCSSHRMRQSTIREHLQSAGRPKRSKTDNVCD-VAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            DQVIAELI MGFEFS V EA++ VGPS++ A+E+ILNG  R                  L K  L +S S  +MRQS+I EHLQ  GR KR +T++V + V+  GS++LPE    S  P                     Q++L+ G DW  +V  LLHKHFG  SLKSFQK+A++AWLA +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    9 DQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRSSRGASSNSKCPTSTGKALDKTALISSHSLDQMRQSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLPEL---SALPVCC------------------QQELEIGKDWVQRVNSLLHKHFGILSLKSFQKEALSAWLAHQDCLVLAATGSGKSLCFQIPALLTGKVVV 197
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BLAST of CV090773 vs. Vitis vinifera peptide
Match: GSVIVT01024519001 (assembled CDS)

HSP 1 Score: 63.929 bits (154), Expect = 6.794e-11
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:  557 LLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            L+ ++FGYS  + +QKD +   L +RD LV+ ATGSGKSLC+Q+P L+ GK  +
Sbjct:    4 LVQRYFGYSGFRPYQKDIIQKILERRDSLVIMATGSGKSLCYQLPPLILGKTAI 57
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BLAST of CV090773 vs. Vitis vinifera peptide
Match: GSVIVT01015057001 (assembled CDS)

HSP 1 Score: 56.225 bits (134), Expect = 1.417e-8
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            KLL  HFG++  +  Q +A+ A L+ RDC  L  TG GKS+C+QIPAL    +V+
Sbjct:   26 KLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKPGIVL 80
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BLAST of CV090773 vs. Vitis vinifera peptide
Match: GSVIVT01036944001 (assembled CDS)

HSP 1 Score: 52.7582 bits (125), Expect = 1.566e-7
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 2 
Query:  524 NGP-DWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            +GP DW+ +   +    FG S+ ++ Q++ + A ++ RD LV+ A G GKSLC+Q+PA+L   V +
Sbjct:   68 SGPFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRDGVAL 133
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BLAST of CV090773 vs. TAIR peptide
Match: AT5G27680.1 (| Symbols: RECQSIM | RECQ helicase SIM | chr5:9794244-9798637 REVERSE LENGTH=858)

HSP 1 Score: 143.665 bits (361), Expect = 9.860e-35
Identity = 91/213 (42.72%), Postives = 122/213 (57.28%), Query Frame = 2 
Query:   86 SPDQVIAELIGMGFEFSDVAEAVKAVG-PSVETAVEYILNGSRRXXXXXXXXXXXXXXXXXVLGKRTLSTS-CSSHRMRQSTIREHLQSAGRPKRSKTDNVCDVAISGSQLLPEPLRESDEPFHAVESNWKINKETFMQRSLGQEDLDNGPDWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            S DQ++ +++ MGFE  D  EAVKAVG  S + AVEYIL G+ R                 +LGKR + +S  SS   RQS++ +H +S  + K+ K D    V +  SQL  E + E  E      +   +    F +  L     +    WE +V  +L   FG SSL+SFQ++A++ W+A +DCLVLAATGSGKSLCFQIPALLTGKVVV
Sbjct:    4 SSDQLVMKIVEMGFEKLDALEAVKAVGGKSCDDAVEYILKGNHRTGGFKPASLLCSSGSNKILGKRAMPSSFSSSESKRQSSLLDHFRSVNQNKK-KGDTFGTVEVD-SQL--ETVSEHSEEVRKSLAPVFMESSCFPEGQLLNGCSEASSSWEKRVNSILRNRFGISSLRSFQREALSTWVAHKDCLVLAATGSGKSLCFQIPALLTGKVVV 212
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BLAST of CV090773 vs. TAIR peptide
Match: AT4G35740.1 (| Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase family protein | chr4:16936233-16940172 FORWARD LENGTH=713)

HSP 1 Score: 55.0694 bits (131), Expect = 4.612e-8
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 2 
Query:  554 KLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTGKVVV 718
            KLL  HFG++  +  Q +A+ A ++ RDC  L  TG GKS+C+QIPAL    +V+
Sbjct:   26 KLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVL 80
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BLAST of CV090773 vs. TAIR peptide
Match: AT1G31360.1 (| Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 | chr1:11232422-11237412 FORWARD LENGTH=705)

HSP 1 Score: 52.373 bits (124), Expect = 2.989e-7
Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 2 
Query:  533 DWELKVKKLLHKHFGYSSLKSFQKDAVAAWLAQRDCLVLAATGSGKSLCFQIPALLTG 706
            +W+ +   +    FG S  ++ QK+ + A +  RD LV+ A G GKSLC+Q+PA+L G
Sbjct:   72 EWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRG 129
The following BLAST results are available for this feature:
BLAST of CV090773 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
RQSIM_ARATH9.745e-3442.72ATP-dependent DNA helicase Q-like SIM OS=Arabidops... [more]
RECQ_ECOLI1.567e-745.00ATP-dependent DNA helicase recQ OS=Escherichia col... [more]
RQL3_ARATH4.558e-745.45ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... [more]
RECQ_SALTY5.953e-745.00ATP-dependent DNA helicase recQ OS=Salmonella typh... [more]
RECQ_PASMU5.953e-753.19ATP-dependent DNA helicase recQ OS=Pasteurella mul... [more]
BLM_CHICK7.775e-743.64Bloom syndrome protein homolog (Fragment) OS=Gallu... [more]
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BLAST of CV090773 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
POPTR_0005s02650.13.046e-4046.23[more]
POPTR_0013s15710.17.317e-1049.06[more]
POPTR_0005s10920.38.090e-949.09[more]
POPTR_0005s10920.18.090e-949.09[more]
POPTR_0003s10340.11.168e-730.91[more]
POPTR_0005s01970.12.603e-741.89[more]
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BLAST of CV090773 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
ppa000740m4.319e-4950.47[more]
ppa002026m7.453e-952.63[more]
ppa001081m1.271e-847.06[more]
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BLAST of CV090773 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7U9T8|D7U9T8_VITVI9.780e-4551.90Whole genome shotgun sequence of line PN40024, sca... [more]
B9N4H6|B9N4H6_POPTR6.788e-3846.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7M5J3|D7M5J3_ARALY8.587e-3341.98Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q6Y5A7|Q6Y5A7_BRANA3.989e-3041.23Putative DNA helicase RecQsim OS=Brassica napus PE... [more]
B9RFA0|B9RFA0_RICCO2.420e-2752.99DNA helicase, putative OS=Ricinus communis GN=RCOM... [more]
C0P9E3|C0P9E3_MAIZE5.961e-2638.16Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q6Y5A8|Q6Y5A8_ORYSJ8.607e-2537.02Putative DNA helicase RecQsim OS=Oryza sativa subs... [more]
Q5WN04|Q5WN04_ORYSJ8.607e-2537.02Os05g0150600 protein OS=Oryza sativa subsp. japoni... [more]
A9TFU5|A9TFU5_PHYPA3.278e-1666.13Predicted protein OS=Physcomitrella patens subsp. ... [more]
B9FMH6|B9FMH6_ORYSJ7.303e-1632.42Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of CV090773 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 4
Match NameE-valueIdentityDescription
GSVIVT010311240014.505e-4751.90assembled CDS[more]
GSVIVT010245190016.794e-1150.00assembled CDS[more]
GSVIVT010150570011.417e-847.27assembled CDS[more]
GSVIVT010369440011.566e-737.88assembled CDS[more]
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BLAST of CV090773 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G27680.19.860e-3542.72| Symbols: RECQSIM | RECQ helicase SIM | chr5:9794... [more]
AT4G35740.14.612e-845.45| Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA hel... [more]
AT1G31360.12.989e-739.66| Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase ... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 14..29
score
NoneNo IPR availableGENE3D1.10.8.10no descriptioncoord: 29..67
score: 7.8
NoneNo IPR availableGENE3D3.40.50.300no descriptioncoord: 188..232
score: 9.3
NoneNo IPR availablePANTHERPTHR13710:SF15DNA HELICASEcoord: 178..238
score: 1.7
NoneNo IPR availableSEGsegsegcoord: 71..87
score
NoneNo IPR availableSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 166..238
score: 5.5
IPR004589DNA helicase, ATP-dependent, RecQ typePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 178..238
score: 1.7
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 11..73
score: 8.8
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminalPFAMPF00270DEADcoord: 198..231
score: 3.4
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryoteSMARTSM00165no descriptioncoord: 29..66
score: 0.
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryotePROFILEPS50030UBAcoord: 27..67
score: 12

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090773 ID=CV090773; Name=CV090773; organism=Vaccinium corymbosum; type=EST; length=720bp
TCNTAGGGTTTCCAAATCGTTCTGTTCACTGCGGTATCGCTATTCGTTTT
GTGCAGTTTACACACCATGGAAGCAAGCTGCGNTCTCTCCTGACCAGGTT
ATAGCCGAATTGATTGGAATGGGATTTGAGTTCTCTGATGTTGCAGAAGC
TGTAAAAGCTGTGGGGCCATCAGTGGAAACTGCTGTTGAATATATTTTGA
ATGGGTCTCGTCGAAATAGTACCATTGCATCAACTAGTTCTAAATCGTCC
ATAAGCAATACCAAAGTCCTGGGTAAACGAACATTGTCAACCTCCTGTTC
TTCTCATCGAATGCGACAGTCGACTATAAGGGAACATCTCCAATCAGCAG
GTAGACCCAAAAGAAGCAAAACTGATAATGTATGTGATGTAGCAATCTCT
GGGTCACAGCTATTGCCTGAACCTTTGAGAGAATCAGATGAGCCTTTTCA
TGCAGTGGAGTCCAATTGGAAAATCAATAAGGAGACATTTATGCAGCGAT
CTCTAGGCCAAGAAGATCTGGATAATGGACCTGATTGGGAGCTGAAAGTC
AAGAAATTGTTGCACAAGCATTTTGGATATTCATCCTTGAAGAGTTTCCA
AAAGGATGCTGTGGCTGCTTGGTTAGCCCAGCGAGACTGCCTTGTTCTCG
CAGCCACAGGATCTGGGAAATCCTTGTGTTTTCAGATTCCAGCATTATTA
ACGGGGAAAGTTGTGGTCGT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0008026ATP-dependent helicase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR004589DNA_helicase_ATP-dep_RecQ
IPR009060UBA-like_sf
IPR011545DEAD/DEAH_box_helicase_dom
IPR015940UBA
noIPRunintegrated