CV090863 | GDV

EST Overview


Name	CV090863
Unique Name	CV090863
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	629

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090863 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s14630.1 ()

HSP 1 Score: 102.064 bits (253), Expect = 2.982e-22
Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKR 409
            MA TSAV  A+PLT A+QKR     A F PL  RPSKA+ ASK++G+F VKASL+EK            SM++P+VAEAAG+G +PSLKNF                      NFDPVKR
Sbjct:    1 MASTSAVSMALPLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASMVIPDVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

[Close]

BLAST of CV090863 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s07160.1 ()

HSP 1 Score: 96.6709 bits (239), Expect = 1.253e-20
Identity = 57/122 (46.72%), Postives = 69/122 (56.56%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVA-SKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSAV  AMPLT A++K   T  A F PL VRPSKA+ A S+  G+F VKASL+EK            SM++PEVAEAAG G++PSL NF                      NFDPV+R+
Sbjct:    1 MASTSAVSMAMPLTHASRKAAPTSEAFFKPLPVRPSKAIAAASRCNGRFQVKASLKEKVVTGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLVAIAGAVVGVSNFDPVRRS 122

[Close]

BLAST of CV090863 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s14630.2 ()

HSP 1 Score: 76.2554 bits (186), Expect = 1.752e-14
Identity = 49/120 (40.83%), Postives = 59/120 (49.17%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKR 409
            MA TSAV  A+PLT A+QKR     A F PL  RPSKA+ ASK++                        SM++P+VAEAAG+G +PSLKNF                      NFDPVKR
Sbjct:    1 MASTSAVSMALPLTYASQKRVPASEAFFKPLPARPSKAMSASKSSA-----------------------SMVIPDVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 97

[Close]

BLAST of CV090863 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s23890.1 ()

HSP 1 Score: 75.0998 bits (183), Expect = 3.904e-14
Identity = 49/123 (39.84%), Postives = 62/123 (50.41%), Query Frame = 2

Query:   62 SAVMAAMPLTSATQKRFL---TCSAAFNPLSVRPSKAV---VASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            ++V  AMPL SA+QKR        +   PL +RPS  V     SK+  +  V+ASL+EK            SM++PEVAEAAG GI+PSLKNF                      NFDPVKR+
Sbjct:    2 ASVSMAMPLASASQKRLEQPPNSQSFLKPLPIRPSMEVGLSTKSKSRARLEVQASLKEKAVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGVVAVAIIGAVLGVSNFDPVKRS 124

[Close]

BLAST of CV090863 vs. P. persica 1.0 peptide
Match: ppa013406m ()

HSP 1 Score: 81.2629 bits (199), Expect = 3.901e-16
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAF-NPLSVRPSKAVV---ASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKR 409
            MA T+AV  AMPL +A++KR  +    F  PL +RPS+A+    AS+++G+  V+ASL+EK            SM++PEVAEAA SG++PSLKNF                      NFDPVKR
Sbjct:    1 MASTTAVTMAMPLPNASRKRIQSSPETFFKPLPLRPSRALTPAAASRSSGRLEVRASLKEKAVTGLTAAALTASMVIPEVAEAA-SGVSPSLKNFLLSIAAGGVVLVVLVGAVIGVSNFDPVKR 123

[Close]

BLAST of CV090863 vs. P. persica 1.0 peptide
Match: ppb011302m ()

HSP 1 Score: 67.781 bits (164), Expect = 4.463e-12
Identity = 47/101 (46.53%), Postives = 58/101 (57.43%), Query Frame = -3

Query:   43 MLSKKFLREGVIPDPAASATSGTIMDXXXXXXXXXXXAFSLSEALTTNFPVVFDATTA--LEGLTDNGLK--AALQVRNLFWVAEVNGIAAITAEVQAILF 333
            MLSKK LREGV P+PAASATSG  M+           AFSL +A T + P+ F  T A   +GLT   L   A L   + FWVA+++GIA    E +AI F
Sbjct:   11 MLSKKLLREGVRPEPAASATSGITMEAVNAAAVKPVTAFSLKDASTLSMPLDFGFTKAAFFDGLTGTDLNSDAELDWFSPFWVADISGIA---IEAEAISF 108

[Close]

BLAST of CV090863 vs. TrEMBL
Match: B9RK19|B9RK19_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1045940 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.883e-22
Identity = 61/121 (50.41%), Postives = 74/121 (61.16%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSAV  AMP+TSA+QK+  +  A F PL +R SKAV+ASK+ GKF VKASL+EK            SM++PEVAEAAGSG++PSLKNF                      NFDPVKR+
Sbjct:    1 MASTSAVSMAMPITSASQKKVPSSEAFFKPLPLRQSKAVMASKSNGKFQVKASLKEKAITGLTAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDPVKRS 121

[Close]

BLAST of CV090863 vs. TrEMBL
Match: A9PJ86|A9PJ86_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.631e-20
Identity = 59/120 (49.17%), Postives = 70/120 (58.33%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKR 409
            MA TSAV  A+PLT A+QKR     A F PL  RPSKA+ ASK++G+F VKASL+EK            SM++PEVAEAAG+G +PSLKNF                      NFDPVKR
Sbjct:    1 MASTSAVSMALPLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASMVIPEVAEAAGAGTSPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

[Close]

BLAST of CV090863 vs. TrEMBL
Match: A9PE66|A9PE66_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.631e-20
Identity = 59/120 (49.17%), Postives = 70/120 (58.33%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKR 409
            MA TSAV  A+PLT A+QKR     A F PL  RPSKA+ ASK++G+F VKASL+EK            SM++PEVAEAAG+G +PSLKNF                      NFDPVKR
Sbjct:    1 MASTSAVSMALPLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASMVIPEVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

[Close]

BLAST of CV090863 vs. TrEMBL
Match: B9MSX5|B9MSX5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_739111 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.783e-20
Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKR 409
            MA TSAV  A+PLT A+QKR     A F PL  RPSKA+ ASK++G+F VKASL+EK            SM++P+VAEAAG+G +PSLKNF                      NFDPVKR
Sbjct:    1 MASTSAVSMALPLTYASQKRIPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASMVIPDVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

[Close]

BLAST of CV090863 vs. TrEMBL
Match: B9N5E4|B9N5E4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_745105 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.527e-18
Identity = 57/122 (46.72%), Postives = 69/122 (56.56%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVA-SKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSAV  AMPLT A++K   T  A F PL VRPSKA+ A S+  G+F VKASL+EK            SM++PEVAEAAG G++PSL NF                      NFDPV+R+
Sbjct:    1 MASTSAVSMAMPLTHASRKAAPTSEAFFKPLPVRPSKAIAAASRCNGRFQVKASLKEKVVTGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLAAIAGAVVGVSNFDPVRRS 122

[Close]

BLAST of CV090863 vs. TrEMBL
Match: A9PIY2|A9PIY2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.443e-18
Identity = 57/122 (46.72%), Postives = 68/122 (55.74%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVA-SKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSAV  AMPLT A++K   T  A F PL VRPSKA+ A S+  G F VKASL+EK            SM++PEVAEAAG G++PSL NF                      NFDPV+R+
Sbjct:    1 MASTSAVSMAMPLTHASRKAAPTSEAFFKPLPVRPSKAIAAASRCNGGFQVKASLKEKVVTGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLAAIAGAVVGVSNFDPVRRS 122

[Close]

BLAST of CV090863 vs. TrEMBL
Match: A9PJ43|A9PJ43_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.880e-17
Identity = 55/122 (45.08%), Postives = 67/122 (54.92%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVA-SKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSAV  AMPLT A++K   T  A F PL  RPSKA+ A S+   +F VKASL+EK            SM++PEVAEAAG G++PSL NF                      NFDPV+R+
Sbjct:    1 MASTSAVSMAMPLTHASRKAAPTSEAFFKPLPARPSKAIAAASRCNDRFQVKASLKEKVVTGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLVAIAGAVVGVSNFDPVRRS 122

[Close]

BLAST of CV090863 vs. TrEMBL
Match: C6SYT2|C6SYT2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.867e-16
Identity = 57/122 (46.72%), Postives = 68/122 (55.74%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAF-NPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSAV   MP+T A+QKR +  S AF  PL +R SKAV ASK  G+F V+AS++EK            SMMVP+VAEAA   +TPSLKNF                      NFDPVKR+
Sbjct:    1 MASTSAVSMVMPVTYASQKRVVPSSDAFFKPLPLRSSKAVTASKLNGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAA---VTPSLKNFLLSIAAGGVVVVAIIGAVIGVSNFDPVKRS 119

[Close]

BLAST of CV090863 vs. TrEMBL
Match: C1K5D2|C1K5D2_9FABA (Chloroplast photosystem II subunit X OS=Vigna radiata GN=MLT55 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.005e-15
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFL-TCSAAFNPLSVRPSKAVVASKTTGKFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSA+  AMP+T A+ K+ + T  A F PL +R SKA+ AS T G+F V+AS++EK            SMM P+VAEAA   ++PSLKNF                      NFDPVKR+
Sbjct:    1 MASTSALSMAMPVTCASHKKVVPTSDAFFKPLPLRSSKALTASNTNGRFQVRASMKEKVVTGLTAAALTASMMAPDVAEAA--SVSPSLKNFLLSIAAGGVVVVAIIGVVIGVANFDPVKRS 120

[Close]

BLAST of CV090863 vs. TrEMBL
Match: D7STV7|D7STV7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035449001 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.789e-12
Identity = 53/123 (43.09%), Postives = 63/123 (51.22%), Query Frame = 2

Query:   62 SAVMAAMPLTSATQKRFL---TCSAAFNPLSVRPSKAVVASKTTGK---FVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            ++V  AM LTSA+Q R L   T  A F PL V+PSK  VA K   +     VKASL+EK            SM++PE AEAA SG++PSLKNF                      NFDPVKRT
Sbjct:    2 ASVSMAMRLTSASQNRLLQRPTSEAFFQPLQVKPSKKAVAVKPKSRGSRLEVKASLKEKAITGLTAAALTASMVLPEAAEAA-SGVSPSLKNFLLSIVAGGVVLGAIVGAVIGVANFDPVKRT 123

[Close]

BLAST of CV090863 vs. Vitis vinifera peptide
Match: GSVIVT01035449001 (assembled CDS)

HSP 1 Score: 75.8702 bits (185), Expect = 1.402e-14
Identity = 53/123 (43.09%), Postives = 63/123 (51.22%), Query Frame = 2

Query:   62 SAVMAAMPLTSATQKRFL---TCSAAFNPLSVRPSKAVVASKTTGK---FVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            ++V  AM LTSA+Q R L   T  A F PL V+PSK  VA K   +     VKASL+EK            SM++PE AEAA SG++PSLKNF                      NFDPVKRT
Sbjct:    2 ASVSMAMRLTSASQNRLLQRPTSEAFFQPLQVKPSKKAVAVKPKSRGSRLEVKASLKEKAITGLTAAALTASMVLPEAAEAA-SGVSPSLKNFLLSIVAGGVVLGAIVGAVIGVANFDPVKRT 123

[Close]

BLAST of CV090863 vs. TAIR peptide
Match: AT2G06520.1 (| Symbols: PSBX | photosystem II subunit X | chr2:2587868-2588218 REVERSE LENGTH=116)

HSP 1 Score: 69.707 bits (169), Expect = 1.444e-12
Identity = 47/122 (38.52%), Postives = 58/122 (47.54%), Query Frame = 2

Query:   50 MACTSAVMAAMPLTSATQKRFLTCSAAFNPLSVRPSKAVVASKTTG-KFVVKASLREKXXXXXXXXXXXXSMMVPEVAEAAGSGITPSLKNFXXXXXXXXXXXXXXXXXXXXXXNFDPVKRT 412
            MA TSA+    PL       FL       PL ++PSKA+VA+     +  VKA   +K            SM++PE+AEAAGSGI+PSLKNF                      NFDPVKRT
Sbjct:    1 MASTSAMSLVTPLNQTRSSPFL------KPLPLKPSKALVATGGRAQRLQVKALKMDKALTGISAAALTASMVIPEIAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNFDPVKRT 116

The following BLAST results are available for this feature:

BLAST of CV090863 vs. Populus trichocarpa peptide v2.0
BLAST of CV090863 vs. P. persica 1.0 peptide
BLAST of CV090863 vs. TrEMBL
BLAST of CV090863 vs. Vitis vinifera peptide
BLAST of CV090863 vs. TAIR peptide

BLAST of CV090863 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0006s14630.1	2.982e-22	48.33	[more]
POPTR_0018s07160.1	1.253e-20	46.72	[more]
POPTR_0006s14630.2	1.752e-14	40.83	[more]
POPTR_0006s23890.1	3.904e-14	39.84	[more]

BLAST of CV090863 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa013406m	3.901e-16	41.94		[more]
ppb011302m	4.463e-12	46.53		[more]

BLAST of CV090863 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9RK19\|B9RK19_RICCO	3.883e-22	50.41	Putative uncharacterized protein OS=Ricinus commun...	[more]
A9PJ86\|A9PJ86_9ROSI	1.631e-20	49.17	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PE66\|A9PE66_POPTR	1.631e-20	49.17	Putative uncharacterized protein OS=Populus tricho...	[more]
B9MSX5\|B9MSX5_POPTR	2.783e-20	48.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9N5E4\|B9N5E4_POPTR	1.527e-18	46.72	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PIY2\|A9PIY2_9ROSI	4.443e-18	46.72	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PJ43\|A9PJ43_9ROSI	2.880e-17	45.08	Putative uncharacterized protein OS=Populus tricho...	[more]
C6SYT2\|C6SYT2_SOYBN	1.867e-16	46.72	Putative uncharacterized protein OS=Glycine max PE...	[more]
C1K5D2\|C1K5D2_9FABA	6.005e-15	42.62	Chloroplast photosystem II subunit X OS=Vigna radi...	[more]
D7STV7\|D7STV7_VITVI	2.789e-12	43.09	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of CV090863 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01035449001	1.402e-14	43.09	assembled CDS	[more]

BLAST of CV090863 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G06520.1	1.444e-12	38.52	\| Symbols: PSBX \| photosystem II subunit X \| chr2:...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 75..93 score
None	No IPR available	SEG	seg	seg	coord: 74..85 score: NAcoord: 108..129 score
None	No IPR available	SEG	seg	seg	coord: 74..91 score: NAcoord: 118..129 score
None	No IPR available	SEG	seg	seg	coord: 67..77 score
IPR009518	Photosystem II PsbX	PFAM	PF06596	PsbX	coord: 100..137 score: 4.1

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090863 ID=CV090863; Name=CV090863; organism=Vaccinium corymbosum; type=EST; length=629bp
CAAAATTCCAACAAAAGCATCTTCTCTGGTGAAGAAAGAGAAAAACAAAA
TGGCCTGTACTTCAGCAGTTATGGCAGCAATGCCATTAACTTCAGCCACC
CAAAAGAGGTTCCTGACCTGCAGTGCCGCCTTCAACCCATTGTCAGTCAG
GCCTTCCAAGGCGGTGGTGGCATCAAAAACCACCGGGAAGTTTGTAGTCA
AGGCCTCACTAAGAGAGAAAGCGGTAACGGGATTGACGGCGGCGGCGTTG
ACGGTGTCCATGATGGTCCCCGAGGTGGCTGAGGCGGCGGGATCCGGTAT
CACACCTTCCCTCAAGAACTTCTTGCTCAGCATCGGAGCCGGCGGCATTG
TGTTGGTCGTGATCGTTGGTGCTGTGGTAGGAGTTGCCAACTTCGACCCT
GTTAAGAGAACTTGAGGGACTGCTCTGGCATACTTTTGATGTATCTCTCT
TTTATGTGTGATGTAATGATCTGTACTAAGATTTGTGAGTATGTAATGGA
TGACTCCATTGGCTTTTGATTCTGCCAAAACCATGCAAATCTCATAATCT
AAAACTTCTACTTTCGTTTGNTCTATTTTTTCCGATAACCGGATGCTCGG
GCTAGCTTACATGCACCTCGACTAATCCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009523	photosystem II
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR009518	PSII_PsbX