CV091019 | GDV

EST Overview


Name	CV091019
Unique Name	CV091019
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	733

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana GN=VPS24-1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.011e-39
Identity = 87/124 (70.16%), Postives = 97/124 (78.23%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            Q  LR+EC                VQKAIK+AAKRNDM SAKALAKEIV SRRTVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAP++A TMQ FSKEM K  ++  F
Sbjct:   22 QRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEF 145

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana GN=VPS24-2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.121e-32
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            V KAIKD+ KRND+ +AKALA+EIV SRRTV RL+ENKAQ+NSISMHLGES+A A TVG+LSKS EVMKLV+ LMKAPEIAVTMQ FSKEM K  ++  F
Sbjct:   17 VHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEF 116

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_PONAB (Charged multivesicular body protein 3 OS=Pongo abelii GN=VPS24 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.268e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V++++KDAAK+        LAKE++RSR+ V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK +  L+K PEI  TM+  SKEM+K  ++
Sbjct:   44 VKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_MACFA (Charged multivesicular body protein 3 OS=Macaca fascicularis GN=VPS24 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.268e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V++++KDAAK+        LAKE++RSR+ V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK +  L+K PEI  TM+  SKEM+K  ++
Sbjct:   44 VKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIRATMRELSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_BOVIN (Charged multivesicular body protein 3 OS=Bos taurus GN=VPS24 PE=2 SV=4)

HSP 1 Score: 89.3521 bits (220), Expect = 2.268e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V++++KDAAK+        LAKE++RSR+ V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK +  L+K PEI  TM+  SKEM+K  ++
Sbjct:   44 VKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_RAT (Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Vps24 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.962e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V++++KDAAK+        LAKE++RSR+ V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK +  L+K PEI  TM+  SKEM+K  ++
Sbjct:   44 VKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_MOUSE (Charged multivesicular body protein 3 OS=Mus musculus GN=Vps24 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.962e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V++++KDAAK+        LAKE++RSR+ V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK +  L+K PEI  TM+  SKEM+K  ++
Sbjct:   44 VKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_HUMAN (Charged multivesicular body protein 3 OS=Homo sapiens GN=VPS24 PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.962e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V++++KDAAK+        LAKE++RSR+ V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK +  L+K PEI  TM+  SKEM+K  ++
Sbjct:   44 VKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_DANRE (Charged multivesicular body protein 3 OS=Danio rerio GN=vps24 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.962e-17
Identity = 41/97 (42.27%), Postives = 67/97 (69.07%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V+++IKDAAK+        LAKE+++S+R +N+L+ +KAQ+NS+ + +   +++ R  G L KS EVMK +  L+K PEI  TM++ SKEM+K  ++
Sbjct:   44 VKRSIKDAAKKGQKDVCIILAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMRDLSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. DB:swissprot:display
Match: CHMP3_XENTR (Charged multivesicular body protein 3 OS=Xenopus tropicalis GN=vps24 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 5.053e-17
Identity = 41/97 (42.27%), Postives = 68/97 (70.10%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V+++IK++AK+ +  +   LAKE+V S++ VN+L+ +KA +NS+ M +   +A+ R  G L KS EVMK + +L+K PEI  TM++ SKEM+K  ++
Sbjct:   44 VKRSIKESAKKGNREACVILAKEVVHSKKAVNKLYASKAHMNSVLMSMKNQLAVLRVSGSLQKSTEVMKAMQNLVKIPEIQATMRDLSKEMMKAGII 140

[Close]

BLAST of CV091019 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s22530.1 ()

HSP 1 Score: 165.622 bits (418), Expect = 2.823e-41
Identity = 89/124 (71.77%), Postives = 98/124 (79.03%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            Q  LR+EC                VQKAI+DAAKRNDM SAKALAKEIV SRRTVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV+DLMKAP++AVTMQ FSKEM K  ++  F
Sbjct:   22 QRRLRQECRNIERQIRDIQREEKTVQKAIRDAAKRNDMVSAKALAKEIVMSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLMKAPDVAVTMQEFSKEMTKAGVIEEF 145

[Close]

BLAST of CV091019 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s03470.1 ()

HSP 1 Score: 159.458 bits (402), Expect = 2.023e-39
Identity = 85/121 (70.25%), Postives = 95/121 (78.51%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+EC                V KAIK+AAKRNDMGSAKALAKEIV SR+ VNRL+ENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAPE+A TMQ FS+EM K  ++
Sbjct:   22 QRKLRQECRNIERQIRDVQREEKSVHKAIKEAAKRNDMGSAKALAKEIVMSRKAVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAATMQEFSREMTKAGVI 142

[Close]

BLAST of CV091019 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s22530.2 ()

HSP 1 Score: 137.887 bits (346), Expect = 6.303e-33
Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 1

Query:  115 MGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            M SAKALAKEIV SRRTVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV+DLMKAP++AVTMQ FSKEM K  ++  F
Sbjct:    1 MVSAKALAKEIVMSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLMKAPDVAVTMQEFSKEMTKAGVIEEF 87

[Close]

BLAST of CV091019 vs. P. persica 1.0 peptide
Match: ppa010967m ()

HSP 1 Score: 171.785 bits (434), Expect = 2.806e-43
Identity = 91/121 (75.21%), Postives = 99/121 (81.82%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+EC                VQKAIKDAAKRNDMGSAK+LAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKS+EVMKLV++LMKAPE+AVTMQ FSKEM K  ++
Sbjct:   22 QRKLRQECRNIERQIRDIQREEKSVQKAIKDAAKRNDMGSAKSLAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSSEVMKLVNNLMKAPEVAVTMQEFSKEMTKAGVI 142

[Close]

BLAST of CV091019 vs. P. persica 1.0 peptide
Match: ppa010938m ()

HSP 1 Score: 155.606 bits (392), Expect = 2.081e-38
Identity = 81/124 (65.32%), Postives = 96/124 (77.42%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            Q  LR+EC                V K+I++AAKRNDMG+AKALAKEI+ SR+ VNRLHENKAQLNSISMHLGESVA+ARTVGHLSKSAEVMKLV++LMKAPE+A TMQ F+KE+ K  ++  F
Sbjct:   22 QRRLRQECRNLERQIRDIQKEEKAVHKSIREAAKRNDMGTAKALAKEILMSRKAVNRLHENKAQLNSISMHLGESVALARTVGHLSKSAEVMKLVNNLMKAPEMAATMQEFTKEITKAGVIEEF 145

[Close]

BLAST of CV091019 vs. TrEMBL
Match: C6TGZ1|C6TGZ1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.886e-39
Identity = 87/121 (71.90%), Postives = 99/121 (81.82%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+EC                VQKAI++AAKRNDMGSAKALAKE+VRSR+TVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAPE+AVTMQ FSKEM K  ++
Sbjct:   22 QRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVI 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: D7SNC2|D7SNC2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031487001 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.097e-38
Identity = 88/121 (72.73%), Postives = 96/121 (79.34%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+EC                VQKAI++AAKRNDM SAK LA EIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAPE+AVTMQ FSKEM K  ++
Sbjct:   53 QRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMVSAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEVAVTMQEFSKEMTKAGVI 173

[Close]

BLAST of CV091019 vs. TrEMBL
Match: C6TD23|C6TD23_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.443e-38
Identity = 85/121 (70.25%), Postives = 98/121 (80.99%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+ C                VQKAI++AAKRNDMGSAKALAKE+VRSR+TVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV++L+KAPE+AVTMQ FSKEM K  ++
Sbjct:   22 QRRLRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLIKAPEMAVTMQEFSKEMTKAGVI 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: D7M1L2|D7M1L2_ARALY (SNF7 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489150 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.213e-37
Identity = 87/124 (70.16%), Postives = 97/124 (78.23%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            Q  LR+EC                VQKAIK+AAKRNDM SAKALAKEIV SRRTVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAP++A TMQ FSKEM K  ++  F
Sbjct:   22 QRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEF 145

[Close]

BLAST of CV091019 vs. TrEMBL
Match: B9HLG6|B9HLG6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_720579 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.701e-37
Identity = 85/121 (70.25%), Postives = 95/121 (78.51%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+EC                V KAIK+AAKRNDMGSAKALAKEIV SR+ VNRL+ENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAPE+A TMQ FS+EM K  ++
Sbjct:   22 QRKLRQECRNIERQIRDVQREEKSVHKAIKEAAKRNDMGSAKALAKEIVMSRKAVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAATMQEFSREMTKAGVI 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: C5X8I7|C5X8I7_SORBI (Putative uncharacterized protein Sb02g033180 OS=Sorghum bicolor GN=Sb02g033180 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.026e-36
Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR EC                V+KAI++AAKRNDMGSAKALAKE+VRSRR VNRL+ENKAQLNS+SMHLGE VA ARTVGHLSKS EVMK+V++LMKAPE+A+TMQ FSKEM K  ++
Sbjct:   22 QRRLRNECRVLDRQIRDVQREEKNVEKAIREAAKRNDMGSAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSTEVMKIVNNLMKAPELAITMQEFSKEMTKAGVM 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: B6TK13|B6TK13_MAIZE (Charged multivesicular body protein 3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.287e-36
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR EC                V+KAI++AAKRNDMGSAKALAKE+VRSRR VNRL+ENKAQLNS+SMHLGE VA ARTVGHLSKS EVMK+V++LMKAPE+A TMQ FSKEM K  ++
Sbjct:   22 QRRLRNECRVLDRQIRDVQREEKNVEKAIREAAKRNDMGSAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSTEVMKIVNNLMKAPELATTMQEFSKEMTKAGVM 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: B4FP46|B4FP46_MAIZE (Charged multivesicular body protein 3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.287e-36
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR EC                V+KAI++AAKRNDMGSAKALAKE+VRSRR VNRL+ENKAQLNS+SMHLGE VA ARTVGHLSKS EVMK+V++LMKAPE+A TMQ FSKEM K  ++
Sbjct:   22 QRRLRNECRVLDRQIRDVQREEKNVEKAIREAAKRNDMGSAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSTEVMKIVNNLMKAPELATTMQEFSKEMTKAGVM 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: Q8GVS9|Q8GVS9_ORYSJ (Putative endosomal Vps protein complex subunit OS=Oryza sativa subsp. japonica GN=P0434A03.111-1 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.653e-36
Identity = 80/121 (66.12%), Postives = 94/121 (77.69%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR EC                V+K+I++AAKRND+GSAKALAKE+VRSRR VNRL+ENKAQLNS+SMHLGE VA ARTVGHLSKSAEVMK+V++LMKAPE+A TMQ FSKEM K  ++
Sbjct:   22 QRKLRNECRVLDRQIRDVQREEKNVEKSIREAAKRNDIGSAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSAEVMKIVNNLMKAPELAATMQEFSKEMTKAGVM 142

[Close]

BLAST of CV091019 vs. TrEMBL
Match: B6SM72|B6SM72_MAIZE (Charged multivesicular body protein 3 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.302e-35
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            V+KAI++AAKRNDMGSAKALAKE+VRSR+ VNRL+ENKAQLNSISMHLGE VA ARTVGHLSKS EVMKLV+ LMKAPE+A TMQ FSKEM K  ++
Sbjct:   46 VEKAIREAAKRNDMGSAKALAKEVVRSRKAVNRLYENKAQLNSISMHLGEIVATARTVGHLSKSTEVMKLVNSLMKAPEVAATMQEFSKEMTKAGVM 142

[Close]

BLAST of CV091019 vs. Vitis vinifera peptide
Match: GSVIVT01031487001 (assembled CDS)

HSP 1 Score: 164.081 bits (414), Expect = 4.992e-41
Identity = 88/121 (72.73%), Postives = 96/121 (79.34%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLL 366
            Q  LR+EC                VQKAI++AAKRNDM SAK LA EIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAPE+AVTMQ FSKEM K  ++
Sbjct:   53 QRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMVSAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEVAVTMQEFSKEMTKAGVI 173

[Close]

BLAST of CV091019 vs. TAIR peptide
Match: AT5G22950.1 (| Symbols: VPS24.1 | SNF7 family protein | chr5:7681380-7682720 FORWARD LENGTH=229)

HSP 1 Score: 160.614 bits (405), Expect = 7.988e-40
Identity = 87/124 (70.16%), Postives = 97/124 (78.23%), Query Frame = 1

Query:    4 QSHLRKECXXXXXXXXXXXXXXXXVQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            Q  LR+EC                VQKAIK+AAKRNDM SAKALAKEIV SRRTVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLV++LMKAP++A TMQ FSKEM K  ++  F
Sbjct:   22 QRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEF 145

[Close]

BLAST of CV091019 vs. TAIR peptide
Match: AT3G45000.1 (| Symbols: VPS24.2, VPS24 | SNF7 family protein | chr3:16460348-16461407 FORWARD LENGTH=200)

HSP 1 Score: 140.198 bits (352), Expect = 1.117e-33
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 1

Query:   76 VQKAIKDAAKRNDMGSAKALAKEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            V KAIKD+ KRND+ +AKALA+EIV SRRTV RL+ENKAQ+NSISMHLGES+A A TVG+LSKS EVMKLV+ LMKAPEIAVTMQ FSKEM K  ++  F
Sbjct:   17 VHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEF 116

[Close]

BLAST of CV091019 vs. TAIR peptide
Match: AT3G45000.2 (| Symbols: VPS24.2, VPS24 | SNF7 family protein | chr3:16460707-16461407 FORWARD LENGTH=139)

HSP 1 Score: 77.0258 bits (188), Expect = 1.162e-14
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1

Query:  211 MHLGESVAIARTVGHLSKSAEVMKLVSDLMKAPEIAVTMQNFSKEMIKVSLLLVF 375
            MHLGES+A A TVG+LSKS EVMKLV+ LMKAPEIAVTMQ FSKEM K  ++  F
Sbjct:    1 MHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEF 55

The following BLAST results are available for this feature:

BLAST of CV091019 vs. DB:swissprot:display
BLAST of CV091019 vs. Populus trichocarpa peptide v2.0
BLAST of CV091019 vs. P. persica 1.0 peptide
BLAST of CV091019 vs. TrEMBL
BLAST of CV091019 vs. Vitis vinifera peptide
BLAST of CV091019 vs. TAIR peptide

BLAST of CV091019 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
VP241_ARATH	8.011e-39	70.16	Vacuolar protein sorting-associated protein 24 hom...	[more]
VP242_ARATH	1.121e-32	74.00	Putative vacuolar protein sorting-associated prote...	[more]
CHMP3_PONAB	2.268e-17	43.30	Charged multivesicular body protein 3 OS=Pongo abe...	[more]
CHMP3_MACFA	2.268e-17	43.30	Charged multivesicular body protein 3 OS=Macaca fa...	[more]
CHMP3_BOVIN	2.268e-17	43.30	Charged multivesicular body protein 3 OS=Bos tauru...	[more]
CHMP3_RAT	2.962e-17	43.30	Charged multivesicular body protein 3 OS=Rattus no...	[more]
CHMP3_MOUSE	2.962e-17	43.30	Charged multivesicular body protein 3 OS=Mus muscu...	[more]
CHMP3_HUMAN	2.962e-17	43.30	Charged multivesicular body protein 3 OS=Homo sapi...	[more]
CHMP3_DANRE	2.962e-17	42.27	Charged multivesicular body protein 3 OS=Danio rer...	[more]
CHMP3_XENTR	5.053e-17	42.27	Charged multivesicular body protein 3 OS=Xenopus t...	[more]

BLAST of CV091019 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0004s22530.1	2.823e-41	71.77	[more]
POPTR_0008s03470.1	2.023e-39	70.25	[more]
POPTR_0004s22530.2	6.303e-33	82.76	[more]

BLAST of CV091019 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa010967m	2.806e-43	75.21		[more]
ppa010938m	2.081e-38	65.32		[more]

BLAST of CV091019 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
C6TGZ1\|C6TGZ1_SOYBN	2.886e-39	71.90	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7SNC2\|D7SNC2_VITVI	1.097e-38	72.73	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6TD23\|C6TD23_SOYBN	5.443e-38	70.25	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7M1L2\|D7M1L2_ARALY	1.213e-37	70.16	SNF7 family protein OS=Arabidopsis lyrata subsp. l...	[more]
B9HLG6\|B9HLG6_POPTR	2.701e-37	70.25	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C5X8I7\|C5X8I7_SORBI	1.026e-36	66.94	Putative uncharacterized protein Sb02g033180 OS=So...	[more]
B6TK13\|B6TK13_MAIZE	2.287e-36	66.94	Charged multivesicular body protein 3 OS=Zea mays ...	[more]
B4FP46\|B4FP46_MAIZE	2.287e-36	66.94	Charged multivesicular body protein 3 OS=Zea mays ...	[more]
Q8GVS9\|Q8GVS9_ORYSJ	6.653e-36	66.12	Putative endosomal Vps protein complex subunit OS=...	[more]
B6SM72\|B6SM72_MAIZE	3.302e-35	79.38	Charged multivesicular body protein 3 OS=Zea mays ...	[more]

BLAST of CV091019 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01031487001	4.992e-41	72.73	assembled CDS	[more]

BLAST of CV091019 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G22950.1	7.988e-40	70.16	\| Symbols: VPS24.1 \| SNF7 family protein \| chr5:76...	[more]
AT3G45000.1	1.117e-33	74.00	\| Symbols: VPS24.2, VPS24 \| SNF7 family protein \| ...	[more]
AT3G45000.2	1.162e-14	72.73	\| Symbols: VPS24.2, VPS24 \| SNF7 family protein \| ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7	PFAM	PF03357	Snf7	coord: 3..117 score: 3.1
None	No IPR available	PANTHER	PTHR10476	SNF7-RELATED	coord: 2..118 score: 4.6
None	No IPR available	PANTHER	PTHR10476:SF1	NEUROENDOCRINE DIFFERENTIATION FACTOR	coord: 2..118 score: 4.6
None	No IPR available	SEG	seg	seg	coord: 10..25 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091019 ID=CV091019; Name=CV091019; organism=Vaccinium corymbosum; type=EST; length=733bp
GGGCAAAGTCATCTCCGCAAAGAATGCCGCAACATCGAACGTCAAATCAT
AGATATACAGAGAGAAGAAAAACGTGTACAGAAAGCAATTAAAGATGCTG
CTAAGAGAAATGATATGGGCTCCGCGAAGGCACTTGCTAAGGAGATTGTG
AGGTCAAGGCGAACTGTTAACCGTCTCCATGAAAACAAGGCACAACTAAA
TTCGATATCAATGCACCTTGGGGAGAGTGTCGCAATTGCCCGGACAGTGG
GACATTTGTCCAAGAGTGCCGAGGTCATGAAGCTTGTCAGTGACCTCATG
AAGGCCCCAGAAATCGCGGTCACAATGCAAAATTTCAGCAAGGAAATGAT
TAAGGTGTCTTTACTTCTAGTGTTTCGCGACTGAAGTTATCAAAGATATT
TTGATTGCAAGAATGGAGTTTTTGTTATGTTGCATCTTCTTATTGAAATG
CACACTTGCAGTTCTTTTCAATGCGAGTACCCCATAATTGAAGTTTTCAT
GTGTATATTTTTCTGCAACCATCACCAATTCGTTGGCCCTTTTTAAATGC
CTATTCTTTCAGTGGATACCAAATTGTCATTTACAACCTGCGGGGATTGA
ATGATATTTGATTGTAGTTCCCATTGAAAAACGACTCTAGTAGTTTATCA
TGAATGAAGTTGTTTTTGAAAACCAGTAATACTTGAAACTGCAGTTAATC
TACGAAAGAAGTGAGGATCAATATTAGCCCCGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K12193	VPS24, CHMP3; charged multivesicular body protein 3

Vocabulary: **KEGG PATHWAY**
Term	Definition
ko04144	Endocytosis

Vocabulary: **INTERPRO**
Term	Definition
IPR005024	Snf7_fam
noIPR	unintegrated