CV091060 | GDV

EST Overview


Name	CV091060
Unique Name	CV091060
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	520

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_TRIEI (Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpA PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 5.671e-9
Identity = 33/69 (47.83%), Postives = 38/69 (55.07%), Query Frame = 1

Query:  250 NQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            N    A IP + AG PD  TT   L VLD  G+  +ELGVPYSDP  DG   P+I A  T +  R T L
Sbjct:   14 NSSQCALIPFITAGDPDLETTAKALEVLDRSGANMIELGVPYSDPLADG---PVIQAAATRSLNRGTTL 79

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_GLOVI (Tryptophan synthase alpha chain OS=Gloeobacter violaceus GN=trpA PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 9.673e-9
Identity = 33/63 (52.38%), Postives = 37/63 (58.73%), Query Frame = 1

Query:  262 VAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXT 450
            VAFIP + AG PD  TT   L  LD  G+  +ELG+PYSDP  DG   P I A  T A AR T
Sbjct:   23 VAFIPFITAGDPDLETTAEALLTLDRNGADLLELGLPYSDPLADG---PTIQAAATRALARGT 82

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 9.673e-9
Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 1

Query:  265 AFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            A IP + AG PD  TT   L +LDA G+  +ELGVPYSDP  DG   P+I A  T A  R   L
Sbjct:   18 ALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADG---PVIQAAATRALGRGVKL 78

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 9.673e-9
Identity = 33/64 (51.56%), Postives = 38/64 (59.38%), Query Frame = 1

Query:  265 AFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            A IP + AG PD +TT   L  LDA G+  +ELGVPYSDP  DG   P+I A  T A  R T L
Sbjct:   18 ALIPFLTAGDPDLATTASALRQLDASGADLIELGVPYSDPLADG---PVIQAAATRALQRGTRL 78

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_SYNP2 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=trpA PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.263e-8
Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 1

Query:  265 AFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            A IP + AG PD  TT   L +LDA G+  +ELGVPYSDP  DG   P I A  T A +R   L
Sbjct:   18 ALIPFITAGDPDLETTEQALKILDAAGADFIELGVPYSDPLADG---PTIQAAATRALSRGVTL 78

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_MICAN (Tryptophan synthase alpha chain OS=Microcystis aeruginosa (strain NIES-843) GN=trpA PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.263e-8
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 1

Query:  250 NQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            +Q   A IP + AG PD STT   L +LD  G+  +ELGVPYSDP  DG   P+I +  T A  R   L
Sbjct:   13 SQGNCALIPFITAGDPDLSTTAQALRILDRAGADLIELGVPYSDPLADG---PVIQSAATRALNRGVKL 78

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_ANAVT (Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpA PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.155e-8
Identity = 30/64 (46.88%), Postives = 37/64 (57.81%), Query Frame = 1

Query:  265 AFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            A IP + AG PD  TT   L +LD+ G+  +ELG+PYSDP  DG   P+I A  T A    T L
Sbjct:   18 ALIPFITAGDPDLETTAAALKILDSNGADIIELGIPYSDPLADG---PVIQAAATRALQNGTKL 78

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_THEEB (Tryptophan synthase alpha chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpA PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.676e-8
Identity = 31/64 (48.44%), Postives = 37/64 (57.81%), Query Frame = 1

Query:  265 AFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            A IP + AG PD  TT   L +LD  G+  +ELG+PYSDP  DG   P+I A  T A  R T L
Sbjct:   20 ALIPFLTAGDPDLETTVAALKILDDHGADLIELGMPYSDPLADG---PVIQAAATRALQRGTRL 80

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_CYAA5 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain ATCC 51142) GN=trpA PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.801e-8
Identity = 31/62 (50.00%), Postives = 36/62 (58.06%), Query Frame = 1

Query:  271 IPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            IP + AG PD  TT   L VLDA G+  +ELGVPYSDP  DG   P+I A  + A  R   L
Sbjct:   20 IPFITAGDPDLETTAKALRVLDASGADLIELGVPYSDPLADG---PVIQAAASRALRRGVKL 78

[Close]

BLAST of CV091060 vs. DB:swissprot:display
Match: TRPA_SYNP6 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpA PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 6.270e-8
Identity = 32/69 (46.38%), Postives = 37/69 (53.62%), Query Frame = 1

Query:  250 NQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            +Q   A IP + AG PD  TT   L  LD  G+  +ELGVPYSDP  DG   P+I A  T A    T L
Sbjct:   13 SQGRCALIPFLTAGDPDLETTRQALLALDREGADLIELGVPYSDPLADG---PVIQAAATRALQAGTRL 78

[Close]

BLAST of CV091060 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s23920.1 ()

HSP 1 Score: 69.3218 bits (168), Expect = 1.527e-12
Identity = 42/83 (50.60%), Postives = 47/83 (56.63%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            Q  VA IP + AG PD STT   L +LDA G   +ELGVPYSDP  DG   P+I A  T + AR TN         KEVVP V
Sbjct:   59 QGKVALIPYITAGDPDLSTTAEALKLLDACGCDIIELGVPYSDPLADG---PVIQAAATRSLARGTNFEA-ITSMLKEVVPQV 137

[Close]

BLAST of CV091060 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s04640.2 ()

HSP 1 Score: 67.781 bits (164), Expect = 4.444e-12
Identity = 41/83 (49.40%), Postives = 46/83 (55.42%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            Q  VA IP + AG PD  TT   L VLDA G   +ELGVPYSDP  DG   P+I A  T + AR TN         +EVVP V
Sbjct:   59 QGKVALIPYITAGDPDLKTTAEALKVLDACGCDIIELGVPYSDPLADG---PVIQAAATRSLARGTNFEA-ITSMLREVVPQV 137

[Close]

BLAST of CV091060 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s04640.1 ()

HSP 1 Score: 67.781 bits (164), Expect = 4.444e-12
Identity = 41/83 (49.40%), Postives = 46/83 (55.42%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            Q  VA IP + AG PD  TT   L VLDA G   +ELGVPYSDP  DG   P+I A  T + AR TN         +EVVP V
Sbjct:   59 QGKVALIPYITAGDPDLKTTAEALKVLDACGCDIIELGVPYSDPLADG---PVIQAAATRSLARGTNFEA-ITSMLREVVPQV 137

[Close]

BLAST of CV091060 vs. P. persica 1.0 peptide
Match: ppa008891m ()

HSP 1 Score: 70.8626 bits (172), Expect = 3.738e-13
Identity = 42/88 (47.73%), Postives = 50/88 (56.82%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            T   NQ  VAFIP + AG PD STT   L VLD+ G+  +ELGVP+SDP  DG   P+I A  T + AR TN         K VVP +
Sbjct:   58 TKLKNQRKVAFIPYITAGDPDLSTTAQALKVLDSSGADVIELGVPHSDPILDG---PVIQASVTRSLARGTNF-NSIMSMLKNVVPQL 141

[Close]

BLAST of CV091060 vs. P. persica 1.0 peptide
Match: ppa020184m ()

HSP 1 Score: 70.0922 bits (170), Expect = 6.376e-13
Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTN 453
            T   NQ  VAFIP + AG PD STT   L VLD+ G+  +ELGVP+SDP  DG   P+I A  T + AR TN
Sbjct:   59 TKLKNQRKVAFIPYITAGDPDLSTTAQALKVLDSSGADVIELGVPHSDPILDG---PVIQASVTRSLARGTN 127

[Close]

BLAST of CV091060 vs. P. persica 1.0 peptide
Match: ppa008948m ()

HSP 1 Score: 67.3958 bits (163), Expect = 4.133e-12
Identity = 40/88 (45.45%), Postives = 49/88 (55.68%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            T    Q  VA IP + AG PD S T   L VLD+ GS  +ELGVPYSDP  DG   P+I A  T + ++ TNL        KEV+P +
Sbjct:   57 TKLKEQGKVALIPYITAGDPDLSITAEALKVLDSCGSDIIELGVPYSDPLADG---PVIQAATTRSLSKGTNL-NSIVSMLKEVIPQL 140

[Close]

BLAST of CV091060 vs. P. persica 1.0 peptide
Match: ppa019700m ()

HSP 1 Score: 66.6254 bits (161), Expect = 7.049e-12
Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            T   NQ  VAFIP + AG P  STT   L VL++ G+  +ELGVP+SDP  DG   P+I A  T + AR TN         K+V+P +
Sbjct:   57 TKLKNQRKVAFIPYITAGDPHLSTTAQALKVLNSSGADVIELGVPHSDPILDG---PVIQASATRSLARGTNF-NSIMSMLKDVIPQL 140

[Close]

BLAST of CV091060 vs. P. persica 1.0 peptide
Match: ppa024401m ()

HSP 1 Score: 58.5362 bits (140), Expect = 1.920e-9
Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPII 414
            T   NQ  VAFIP + AG P  STT   L VLD+ G+  +ELGVP+SDP  D    PI+
Sbjct:   57 TKLKNQREVAFIPYITAGDPGLSTTAQALKVLDSSGADMIELGVPHSDPILDVISFPIV 115

[Close]

BLAST of CV091060 vs. TrEMBL
Match: C6TKV4|C6TKV4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.422e-11
Identity = 44/88 (50.00%), Postives = 51/88 (57.95%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            T    +  VAFIP V AG PD STT   L VLD+ GS  +ELGVPYSDP  DG   P+I A  T + A+ TNL        KEVVP +
Sbjct:   55 TRLKKEGKVAFIPYVTAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADG---PVIQAAATRSLAKGTNL-NAIIDMLKEVVPQL 138

[Close]

BLAST of CV091060 vs. TrEMBL
Match: B6SCD1|B6SCD1_LAMGA (Indole-3-glycerol phosphate lyase IGL1 (Fragment) OS=Lamium galeobdolon PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.422e-11
Identity = 43/83 (51.81%), Postives = 49/83 (59.04%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            Q  VAFIP + AG PD STT   L VLD+ GS  +ELGVPYSDP  DG   P+I A  + A AR TN         KEVVP +
Sbjct:   62 QGKVAFIPYITAGDPDLSTTAEVLKVLDSCGSDIIELGVPYSDPLADG---PVIQAAASRALARGTNF-DKIIAMLKEVVPQL 140

[Close]

BLAST of CV091060 vs. TrEMBL
Match: Q06H27|Q06H27_ARAHY (Tryptophan synthase alpha chain (Fragment) OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.857e-11
Identity = 43/88 (48.86%), Postives = 50/88 (56.82%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            T    Q  VAFIP + AG PD STT   L VLD+ GS  +ELGVPYSDP  DG   P+I A  T + A+ TN         KEVVP +
Sbjct:   55 TRLKKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADG---PVIQAAATRSLAKGTNF-DAIISMLKEVVPQL 138

[Close]

BLAST of CV091060 vs. TrEMBL
Match: Q8LA83|Q8LA83_ARATH (Tryptophan synthase alpha chain OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.167e-11
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            T    Q  VAFIP + AG PD STT   L VLDA GS  +ELGVPYSDP  DG   P+I A  T +  R TNL
Sbjct:   56 TQLKKQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADG---PVIQAAATRSLERGTNL 125

[Close]

BLAST of CV091060 vs. TrEMBL
Match: Q42529|Q42529_ARATH (At3g54640 OS=Arabidopsis thaliana GN=TSA1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.167e-11
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            T    Q  VAFIP + AG PD STT   L VLDA GS  +ELGVPYSDP  DG   P+I A  T +  R TNL
Sbjct:   56 TQLKKQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADG---PVIQAAATRSLERGTNL 125

[Close]

BLAST of CV091060 vs. TrEMBL
Match: D7LUW2|D7LUW2_ARALY (Alpha subunit of tryptophan synthase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485868 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.167e-11
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            T    Q  VAFIP + AG PD STT   L VLDA GS  +ELGVPYSDP  DG   P+I A  T +  R TNL
Sbjct:   57 TQLKKQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADG---PVIQAAATRSLERGTNL 126

[Close]

BLAST of CV091060 vs. TrEMBL
Match: B6SCC9|B6SCC9_9MAGN (Indole-3-glycerol phosphate lyase IGL1vs1 OS=Consolida orientalis PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.167e-11
Identity = 39/67 (58.21%), Postives = 43/67 (64.18%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTN 453
            Q  VAFIP + AG PD STT   L VLD+ GS  +ELGVPYSDP  DG   P+I A  T A AR TN
Sbjct:   68 QGRVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADG---PVIQAAATRALARGTN 131

[Close]

BLAST of CV091060 vs. TrEMBL
Match: D7SQJ6|D7SQJ6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_141.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000716001 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.403e-11
Identity = 42/83 (50.60%), Postives = 49/83 (59.04%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            Q  VA IP + AG PD STT   L VLD+ GS  +ELG+PYSDP  DG   P+I A  T + AR TNL        KEVVP +
Sbjct:   22 QGQVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADG---PVIQAAATRSLARGTNL-NAVISMLKEVVPQL 100

[Close]

BLAST of CV091060 vs. TrEMBL
Match: B9S4R8|B9S4R8_RICCO (Trytophan synthase alpha subunit, putative OS=Ricinus communis GN=RCOM_0991580 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.215e-11
Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 1

Query:  262 VAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            VAFIP + AG PD STT   L +LD+ GS  +ELGVPYSDP  DG   P+I A  T + AR TN         KEVVP +
Sbjct:   65 VAFIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADG---PVIQAAATRSLARGTNF-DAITSMLKEVVPQL 140

[Close]

BLAST of CV091060 vs. TrEMBL
Match: B6SCD0|B6SCD0_9MAGN (Indole-3-glycerol phosphate lyase IGL1vs2 OS=Consolida orientalis PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.215e-11
Identity = 38/67 (56.72%), Postives = 42/67 (62.69%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTN 453
            Q  VAFIP + AG PD STT   L VLD+ GS  +ELGVPYSDP  DG   P+I A  T   AR TN
Sbjct:   68 QGRVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADG---PVIQAAATRVLARGTN 131

[Close]

BLAST of CV091060 vs. Vitis vinifera peptide
Match: GSVIVT01000716001 (assembled CDS)

HSP 1 Score: 70.8626 bits (172), Expect = 3.210e-13
Identity = 42/83 (50.60%), Postives = 49/83 (59.04%), Query Frame = 1

Query:  253 QXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            Q  VA IP + AG PD STT   L VLD+ GS  +ELG+PYSDP  DG   P+I A  T + AR TNL        KEVVP +
Sbjct:   22 QGQVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADG---PVIQAAATRSLARGTNL-NAVISMLKEVVPQL 100

[Close]

BLAST of CV091060 vs. TAIR peptide
Match: AT3G54640.1 (| Symbols: TSA1, TRP3 | tryptophan synthase alpha chain | chr3:20223331-20225303 REVERSE LENGTH=312)

HSP 1 Score: 71.633 bits (174), Expect = 2.717e-13
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 1

Query:  238 TGXXNQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL 456
            T    Q  VAFIP + AG PD STT   L VLDA GS  +ELGVPYSDP  DG   P+I A  T +  R TNL
Sbjct:   56 TQLKKQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADG---PVIQAAATRSLERGTNL 125

[Close]

BLAST of CV091060 vs. TAIR peptide
Match: AT4G02610.1 (| Symbols: | Aldolase-type TIM barrel family protein | chr4:1147662-1149217 FORWARD LENGTH=275)

HSP 1 Score: 63.929 bits (154), Expect = 5.665e-11
Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 1

Query:  250 NQXXVAFIPXVXAGXPDXSTTXXXLXVLDAXGSYXVELGVPYSDPXXDGPXIPIIPAXXTXAXARXTNL*CXFFRCXKEVVPHV 501
            +Q  VA IP + AG PD STT   L VLD+ GS  +ELGVPYSDP  DG   P I A    +  + TN         KEV+P +
Sbjct:   22 SQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSDPLADG---PAIQAAARRSLLKGTNF-NSIISMLKEVIPQL 101

The following BLAST results are available for this feature:

BLAST of CV091060 vs. DB:swissprot:display
BLAST of CV091060 vs. Populus trichocarpa peptide v2.0
BLAST of CV091060 vs. P. persica 1.0 peptide
BLAST of CV091060 vs. TrEMBL
BLAST of CV091060 vs. Vitis vinifera peptide
BLAST of CV091060 vs. TAIR peptide

BLAST of CV091060 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
TRPA_TRIEI	5.671e-9	47.83	Tryptophan synthase alpha chain OS=Trichodesmium e...	[more]
TRPA_GLOVI	9.673e-9	52.38	Tryptophan synthase alpha chain OS=Gloeobacter vio...	[more]
TRPA_CYAP8	9.673e-9	50.00	Tryptophan synthase alpha chain OS=Cyanothece sp. ...	[more]
TRPA_ACAM1	9.673e-9	51.56	Tryptophan synthase alpha chain OS=Acaryochloris m...	[more]
TRPA_SYNP2	1.263e-8	50.00	Tryptophan synthase alpha chain OS=Synechococcus s...	[more]
TRPA_MICAN	1.263e-8	46.38	Tryptophan synthase alpha chain OS=Microcystis aer...	[more]
TRPA_ANAVT	2.155e-8	46.88	Tryptophan synthase alpha chain OS=Anabaena variab...	[more]
TRPA_THEEB	3.676e-8	48.44	Tryptophan synthase alpha chain OS=Thermosynechoco...	[more]
TRPA_CYAA5	4.801e-8	50.00	Tryptophan synthase alpha chain OS=Cyanothece sp. ...	[more]
TRPA_SYNP6	6.270e-8	46.38	Tryptophan synthase alpha chain OS=Synechococcus s...	[more]

BLAST of CV091060 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0005s23920.1	1.527e-12	50.60	[more]
POPTR_0002s04640.2	4.444e-12	49.40	[more]
POPTR_0002s04640.1	4.444e-12	49.40	[more]

BLAST of CV091060 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 5


Match Name	E-value	Identity
ppa008891m	3.738e-13	47.73	[more]
ppa020184m	6.376e-13	52.78	[more]
ppa008948m	4.133e-12	45.45	[more]
ppa019700m	7.049e-12	44.32	[more]
ppa024401m	1.920e-9	50.85	[more]

BLAST of CV091060 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
C6TKV4\|C6TKV4_SOYBN	1.422e-11	50.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
B6SCD1\|B6SCD1_LAMGA	1.422e-11	51.81	Indole-3-glycerol phosphate lyase IGL1 (Fragment) ...	[more]
Q06H27\|Q06H27_ARAHY	1.857e-11	48.86	Tryptophan synthase alpha chain (Fragment) OS=Arac...	[more]
Q8LA83\|Q8LA83_ARATH	3.167e-11	54.79	Tryptophan synthase alpha chain OS=Arabidopsis tha...	[more]
Q42529\|Q42529_ARATH	3.167e-11	54.79	At3g54640 OS=Arabidopsis thaliana GN=TSA1 PE=2 SV=...	[more]
D7LUW2\|D7LUW2_ARALY	3.167e-11	54.79	Alpha subunit of tryptophan synthase OS=Arabidopsi...	[more]
B6SCC9\|B6SCC9_9MAGN	3.167e-11	58.21	Indole-3-glycerol phosphate lyase IGL1vs1 OS=Conso...	[more]
D7SQJ6\|D7SQJ6_VITVI	5.403e-11	50.60	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9S4R8\|B9S4R8_RICCO	9.215e-11	51.25	Trytophan synthase alpha subunit, putative OS=Rici...	[more]
B6SCD0\|B6SCD0_9MAGN	9.215e-11	56.72	Indole-3-glycerol phosphate lyase IGL1vs2 OS=Conso...	[more]

BLAST of CV091060 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01000716001	3.210e-13	50.60	assembled CDS	[more]

BLAST of CV091060 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G54640.1	2.717e-13	54.79	\| Symbols: TSA1, TRP3 \| tryptophan synthase alpha ...	[more]
AT4G02610.1	5.665e-11	45.24	\| Symbols: \| Aldolase-type TIM barrel family prot...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002028	Tryptophan synthase, alpha chain	PFAM	PF00290	Trp_syntA	coord: 62..112 score: 1.7
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 49..112 score: 7.4
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	no description	coord: 60..112 score: 2.2
None	No IPR available	SEG	seg	seg	coord: 5..11 score: NAcoord: 15..56 score: NAcoord: 110..124 score
None	No IPR available	SEG	seg	seg	coord: 8..14 score: NAcoord: 26..37 score: NAcoord: 60..74 score: NAcoord: 76..86 score
None	No IPR available	SEG	seg	seg	coord: 12..22 score: NAcoord: 35..57 score
None	No IPR available	SEG	seg	seg	coord: 24..34 score: NAcoord: 37..51 score
None	No IPR available	SEG	seg	seg	coord: 7..16 score: NAcoord: 39..49 score
None	No IPR available	SEG	seg	seg	coord: 6..20 score: NAcoord: 44..50 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091060 ID=CV091060; Name=CV091060; organism=Vaccinium corymbosum; type=EST; length=520bp
GCCCAANCAAAATCCTCTTCTCAANTAANANACATTTGACTGCTCTGATG
GCCNTTGCCCTGANANCNCCTAGNTTCTTGCANGTGNNCAANGACACNTA
CCTCCCACCACTNGCNTCTTCTCANTCAAGGCCTCCTNNTTCCCGAGAGC
TNCCCTTCTCTNNCNNCNCATTCANNACCTACANNGCTCTGCTCTCCGTT
GTCTTCNCCCNNCAGGTTGGNCTCTCAGAGGCTTTGCACCGGANTGNAAA
ATCAANGCNNAGTGGCTTTTATCCCATANGTCNCNGCTGGCGANCCTGAC
NTTTCGACGACGGNCNAANCNCTTANGGTTCTTGATGCTTGNGGNTCATA
CATNGTTGAACTGGGTGTACCATATTCTGATCCTTNGGNNGATGGGCCAG
NTATACCGATAATTCCGGCTGNTGNCACGNGTGCCNTAGCAAGAGNGACT
AATCTTTAATGCGNATTCTTTCGNTGTTANAAGGAGGTAGTACCTCATGT
TATCTTGCTGCGGTTGCGTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004834	tryptophan synthase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006568	tryptophan metabolic process
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR002028	Trp_synthase_suA
IPR011060	RibuloseP-bd_barrel
IPR013785	Aldolase_TIM
noIPR	unintegrated