CV091248 | GDV

EST Overview


Name	CV091248
Unique Name	CV091248
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	473

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV091248 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s16630.1 ()

HSP 1 Score: 80.1073 bits (196), Expect = 7.034e-16
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG TA D++AYERQLA+S+              ALM PQ Q          GAAGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  349 LPPPAAAPLPGLTATDILAYERQLAISK---------MGGIHALMHPQGQHPLKQATMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 426

[Close]

BLAST of CV091248 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s06680.1 ()

HSP 1 Score: 70.8626 bits (172), Expect = 4.268e-13
Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A D++AYERQLALS+               L   QA     AGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  345 LPPPAAAPLPGISATDILAYERQLALSKMGGVHAFMPPHGQLPL--KQAAMGMGAGASQAIYDGGFQNVAAAQQLMYYQ 421

[Close]

BLAST of CV091248 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s14150.1 ()

HSP 1 Score: 63.929 bits (154), Expect = 5.217e-11
Identity = 39/88 (44.32%), Postives = 47/88 (53.41%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLV--AYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYY 235
            LPPP A  MP  +AA+L   AYE+Q+ALS+            A ALM PQ            G  G+SQAIYDGG+   A+TQ  MYY
Sbjct:  334 LPPPAAGHMPSLSAAELAVAAYEQQMALSKYG----------APALMHPQGHHALKQAVMGMGTVGSSQAIYDGGFQNAATTQQLMYY 411

[Close]

BLAST of CV091248 vs. P. persica 1.0 peptide
Match: ppa006419m ()

HSP 1 Score: 86.2705 bits (212), Expect = 7.157e-18
Identity = 49/85 (57.65%), Postives = 55/85 (64.71%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRF------GAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AAQMPGF+AADL AYERQ+ALS+            AQALM PQ Q          AGASQAIYDGG+  +A+TQ  MYYQ
Sbjct:  338 LPPPAAAQMPGFSAADLAAYERQMALSK---------MGGAQALMLPQGQHALKAAMGMGAGASQAIYDGGFQNVATTQQLMYYQ 413

[Close]

BLAST of CV091248 vs. P. persica 1.0 peptide
Match: ppa006170m ()

HSP 1 Score: 73.559 bits (179), Expect = 4.800e-14
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 2

Query:    5 PPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            PP  AA +PG +A DL+AYERQLA+S+              ALM PQ Q          G AGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  348 PPAAAAPLPGLSATDLLAYERQLAMSKMGG---------VHALMHPQGQHPLKQAAMGMGTAGASQAIYDGGFQNVAAAQQLMYYQ 424

[Close]

BLAST of CV091248 vs. TrEMBL
Match: Q9M427|Q9M427_NICPL (Oligouridylate binding protein OS=Nicotiana plumbaginifolia GN=ubp1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.188e-15
Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYY 235
            LPPP   Q+PG +A DL AY+RQLAL++            AQA MQPQ QR GA G  Q IYDGGY GIASTQP MY+
Sbjct:  340 LPPPAIGQIPGLSAMDLAAYQRQLALAK---------MAGAQAFMQPQGQRIGAPG--QGIYDGGYGGIASTQPPMYF 406

[Close]

BLAST of CV091248 vs. TrEMBL
Match: B9N7F5|B9N7F5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_673211 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.898e-14
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG TA D++AYERQLA+S+              ALM PQ Q          GAAGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  349 LPPPAAAPLPGLTATDILAYERQLAISK---------MGGIHALMHPQGQHPLKQATMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 426

[Close]

BLAST of CV091248 vs. TrEMBL
Match: D7TZP5|D7TZP5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016720001 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.032e-13
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A DL+AYERQLA+S+              ALM PQ Q          GAAGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  332 LPPPAAAPLPGLSATDLLAYERQLAMSK-----------MGHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 407

[Close]

BLAST of CV091248 vs. TrEMBL
Match: A5AXF7|A5AXF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027348 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.032e-13
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A DL+AYERQLA+S+              ALM PQ Q          GAAGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  345 LPPPAAAPLPGLSATDLLAYERQLAMSK-----------MGHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 420

[Close]

BLAST of CV091248 vs. TrEMBL
Match: B7FLK8|B7FLK8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.120e-13
Identity = 42/82 (51.22%), Postives = 52/82 (63.41%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQ---RFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A D++AYERQLA+S+              ALM PQAQ   +  A GASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  334 LPPPAAAPLPGLSATDILAYERQLAMSKMGGVH--------AALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMMYYQ 407

[Close]

BLAST of CV091248 vs. TrEMBL
Match: B9ST80|B9ST80_RICCO (Nucleolysin tia-1, putative OS=Ricinus communis GN=RCOM_0684960 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.733e-13
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A DL+ YERQLA+ +              ALM PQ Q          GAAGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  345 LPPPAAAPLPGLSATDLLTYERQLAMGKMGG---------VHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 422

[Close]

BLAST of CV091248 vs. TrEMBL
Match: D7L2C5|D7L2C5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478823 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.261e-11
Identity = 41/87 (47.13%), Postives = 50/87 (57.47%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP  A +PG +AADL+AYERQLALS+              ALM PQ Q           AAGA+ A+YDGG+  +A+ Q  MYYQ
Sbjct:  353 LPPPAPAPVPGLSAADLLAYERQLALSK---------MASVNALMHPQGQHPLRQGAHGINAAGATAAMYDGGFQNVAAAQQLMYYQ 430

[Close]

BLAST of CV091248 vs. TrEMBL
Match: Q8LAP3|Q8LAP3_ARATH (Oligouridylate binding protein, putative OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.792e-11
Identity = 40/86 (46.51%), Postives = 49/86 (56.98%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR-------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP  A +PG +AADL+ YERQLALS+              ALM PQ Q          AAGA+ A+YDGG+  +A+ Q  MYYQ
Sbjct:  351 LPPPAPAPVPGLSAADLLNYERQLALSK---------MASVNALMHPQGQHPLRQAHGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of CV091248 vs. TrEMBL
Match: B9GVQ6|B9GVQ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645804 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.792e-11
Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A D++AYERQLALS+               L   QA     AGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  345 LPPPAAAPLPGISATDILAYERQLALSKMGGVHAFMPPHGQLPL--KQAAMGMGAGASQAIYDGGFQNVAAAQQLMYYQ 421

[Close]

BLAST of CV091248 vs. TrEMBL
Match: Q9LJH8|Q9LJH8_ARATH (AT3g14100/MAG2_5 OS=Arabidopsis thaliana GN=At3g14100 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.378e-10
Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP  A +PG +AADL+ YERQLALS+               L   QA    AAGA+ A+YDGG+  +A+ Q  MYYQ
Sbjct:  351 LPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHQQGQHPLR--QAHGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of CV091248 vs. Vitis vinifera peptide
Match: GSVIVT01016720001 (assembled CDS)

HSP 1 Score: 79.7221 bits (195), Expect = 5.770e-16
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP AA +PG +A DL+AYERQLA+S+              ALM PQ Q          GAAGASQAIYDGG+  +A+ Q  MYYQ
Sbjct:  332 LPPPAAAPLPGLSATDLLAYERQLAMSK-----------MGHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 407

[Close]

BLAST of CV091248 vs. TAIR peptide
Match: AT3G14100.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4673027-4675950 FORWARD LENGTH=427)

HSP 1 Score: 68.5514 bits (166), Expect = 1.875e-12
Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP  A +PG +AADL+ YERQLALS+               L   QA    AAGA+ A+YDGG+  +A+ Q  MYYQ
Sbjct:  351 LPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHQQGQHPLR--QAHGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of CV091248 vs. TAIR peptide
Match: AT1G17370.2 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=416)

HSP 1 Score: 66.6254 bits (161), Expect = 7.124e-12
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP  A +PGF+A+DL+AYERQLA+S+             Q   +  A   GA G++QAIYDGGY    + Q  MYYQ
Sbjct:  343 LPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAA--MGATGSNQAIYDGGY---QNAQQLMYYQ 416

[Close]

BLAST of CV091248 vs. TAIR peptide
Match: AT1G17370.1 (| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419)

HSP 1 Score: 66.6254 bits (161), Expect = 7.124e-12
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQRFGAAGASQAIYDGGYPGIASTQPSMYYQ 238
            LPPP  A +PGF+A+DL+AYERQLA+S+             Q   +  A   GA G++QAIYDGGY    + Q  MYYQ
Sbjct:  346 LPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAA--MGATGSNQAIYDGGY---QNAQQLMYYQ 419

[Close]

BLAST of CV091248 vs. TAIR peptide
Match: AT1G54080.1 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=426)

HSP 1 Score: 58.151 bits (139), Expect = 2.534e-9
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIAST-QPSMYYQ 238
            LPPP  A +P  +A DL+AYERQLAL++                M PQAQ            AG + A+YDGGY  +A+  Q  MYYQ
Sbjct:  355 LPPPAPASVPSLSAMDLLAYERQLALAK----------------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 426

[Close]

BLAST of CV091248 vs. TAIR peptide
Match: AT1G54080.2 (| Symbols: UBP1A | oligouridylate-binding protein 1A | chr1:20183923-20186824 REVERSE LENGTH=430)

HSP 1 Score: 58.151 bits (139), Expect = 2.534e-9
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 2

Query:    2 LPPPTAAQMPGFTAADLVAYERQLALSRXXXXXXXXXXXXAQALMQPQAQR--------FGAAGASQAIYDGGYPGIAST-QPSMYYQ 238
            LPPP  A +P  +A DL+AYERQLAL++                M PQAQ            AG + A+YDGGY  +A+  Q  MYYQ
Sbjct:  359 LPPPAPASVPSLSAMDLLAYERQLALAK----------------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 430

The following BLAST results are available for this feature:

BLAST of CV091248 vs. Populus trichocarpa peptide v2.0
BLAST of CV091248 vs. P. persica 1.0 peptide
BLAST of CV091248 vs. TrEMBL
BLAST of CV091248 vs. Vitis vinifera peptide
BLAST of CV091248 vs. TAIR peptide

BLAST of CV091248 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0001s16630.1	7.034e-16	50.57	[more]
POPTR_0003s06680.1	4.268e-13	49.37	[more]
POPTR_0006s14150.1	5.217e-11	44.32	[more]

BLAST of CV091248 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa006419m	7.157e-18	57.65		[more]
ppa006170m	4.800e-14	47.67		[more]

BLAST of CV091248 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q9M427\|Q9M427_NICPL	4.188e-15	57.69	Oligouridylate binding protein OS=Nicotiana plumba...	[more]
B9N7F5\|B9N7F5_POPTR	7.898e-14	50.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TZP5\|D7TZP5_VITVI	1.032e-13	50.57	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AXF7\|A5AXF7_VITVI	1.032e-13	50.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B7FLK8\|B7FLK8_MEDTR	5.120e-13	51.22	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9ST80\|B9ST80_RICCO	8.733e-13	48.28	Nucleolysin tia-1, putative OS=Ricinus communis GN...	[more]
D7L2C5\|D7L2C5_ARALY	1.261e-11	47.13	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q8LAP3\|Q8LAP3_ARATH	4.792e-11	46.51	Oligouridylate binding protein, putative OS=Arabid...	[more]
B9GVQ6\|B9GVQ6_POPTR	4.792e-11	49.37	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9LJH8\|Q9LJH8_ARATH	2.378e-10	46.84	AT3g14100/MAG2_5 OS=Arabidopsis thaliana GN=At3g14...	[more]

BLAST of CV091248 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01016720001	5.770e-16	50.57	assembled CDS	[more]

BLAST of CV091248 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G14100.1	1.875e-12	46.84	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]
AT1G17370.2	7.124e-12	46.84	\| Symbols: UBP1B \| oligouridylate binding protein ...	[more]
AT1G17370.1	7.124e-12	46.84	\| Symbols: UBP1B \| oligouridylate binding protein ...	[more]
AT1G54080.1	2.534e-9	40.91	\| Symbols: UBP1A \| oligouridylate-binding protein ...	[more]
AT1G54080.2	2.534e-9	40.91	\| Symbols: UBP1A \| oligouridylate-binding protein ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 29..40 score
None	No IPR available	SEG	seg	seg	coord: 64..77 score: NAcoord: 84..95 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091248 ID=CV091248; Name=CV091248; organism=Vaccinium corymbosum; type=EST; length=473bp
GCTTCCACCCCCAACTGCTGCACAGATGCCAGGTTTTACCGCCGCTGATC
TTGTAGCCTATGAGCGACAACTGGCATTGAGTAGAATGGGGATGGGAATG
GGCATGGGAATGGGAATGGGTGCACAAGCTCTGATGCAGCCACAAGCTCA
GCGATTTGGTGCTGCCGGAGCTAGTCAGGCAATCTACGATGGTGGGTATC
CAGGGATTGCCTCCACCCAGCCGTCCATGTATTACCAGTAATAAATAATT
ATGTAGGCCTTCTAGGAAGGAATCTATTACTTTAACTGGATGTAGAATGT
TTGGGCTTGCGTTTGGATTTTCTTTTCTTGTTTGTTCTCCTCCACAGTGG
TTAACGGGCTTTGTGCCCTACTCTAGACCAGCTGTGTATGGAGCATGTAT
TTTATACTGGGTGGAGACAATCTCATCTAAACTACAGTTTCCTTACGGAA
TGGATGAGCGTCTCGAGTTTTCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated