CV091091
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV091091 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s04240.1 () HSP 1 Score: 70.4774 bits (171), Expect = 1.215e-12 Identity = 70/215 (32.56%), Postives = 90/215 (41.86%), Query Frame = 1 Query: 1 KKLISQGIDPRTHKPLIXXXXXXXXXXXXXXXXXXXXATNYHALXXXXXXXLVTTALED------QVLNKGNNGYY-------------------HGSVILQNSDVS-----------GIGNEEQDDDEINYCGTDDVFMSSFLNSLINEDGFNAQHQLHQMXXXXXXXXXXXXXXXXXXDPLMS-HPSTFAFGAGWENPIMSSGYNGFNQNESK 534 KKLISQGIDPRTHKPL A + A +V++ LE+ +++N+ N + HG L N D + GIG +QD + GTDDVF SFLNSLINE+ QHQ+ + DP +S +TF G GWE+ +MSS FNQNESK Sbjct: 127 KKLISQGIDPRTHKPL-------NPQSFDQSKPSLSKANLHQARLKEPIKNIVSSGLEEATSGSTRIINRENEYFQNNINAHLDDQYHADHFIASHGYTSLLNYDGTSGMDLKGDQSLGIGEADQDINS----GTDDVF--SFLNSLINEEALQ-QHQILNVPNVNCAPPSS--------DPFVSIAATTFGLGTGWESTLMSS---AFNQNESK 316
BLAST of CV091091 vs. P. persica 1.0 peptide
Match: ppa006730m () HSP 1 Score: 56.6102 bits (135), Expect = 1.280e-8 Identity = 49/131 (37.40%), Postives = 64/131 (48.85%), Query Frame = 1 Query: 184 LNKGNNGYYHGSVILQNSDVSGIGNEEQDDDEINYCGTDDVFMSSFLNSLINEDGFNAQHQLHQMXXXXXXXXXXXXXXXXXXD---PLMSH------PSTFAFGAGWENPIMSSGYNGFNQNESKKFSHD 549 L+ +NG +G +L GNEE DD++N C DDVF SSFLNSLINED F+ QH L Q D PL+S PSTF GWE+ ++ S + F QN+ + +D Sbjct: 281 LSLRSNGSNNGGALLG-------GNEE--DDDMNCCA-DDVF-SSFLNSLINEDPFSGQHHLQQQVLLQNGNNAHNAAAADGSDHHVPLVSSGAGATAPSTF----GWESAVLMS--SAFIQNDHHRVLND 394
BLAST of CV091091 vs. TrEMBL
Match: D7SLJ7|D7SLJ7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025452001 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.065e-14 Identity = 73/190 (38.42%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 1 KKLISQGIDPRTHKPLIXXXXXXXXXXXXXXXXXXXXATNYHALXXXXXXXLVTTALEDQVLNKGNNGYYHGSVILQNSDVSGIG---NEEQDDDEINYCGTDDVFMSSFLNSLINEDGFNAQHQLHQMXXXXXXXXXXXXXXXXXXDPLMSHPS--TFAFGAGWENPIMSSGYNGFNQ-NESKKFSHDP 552 KKLISQGIDPRTHKPL A N+ + + Q+ GN+G S +QNSD SG G + ++DD++N CGTDDVF SSFLNSLINED F QH L Q D L+S S +F FG WE M+S + F+Q + SK+F+ P Sbjct: 127 KKLISQGIDPRTHKPL---NPNSSVDVKASSSKAKAEAGNFKSDN------------QYQIGAAGNDG----SANIQNSDGSGTGLRSSNNEEDDDLN-CGTDDVF-SSFLNSLINEDLFPGQHHLQQQ--------HHGGLIAPGSDALISTSSVQSFGFGTSWEAAAMTS-TSAFSQIDHSKRFNDQP 286
BLAST of CV091091 vs. TrEMBL
Match: Q58QD0|Q58QD0_VITVI (MYB5b OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 9.012e-14 Identity = 69/195 (35.38%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 1 KKLISQGIDPRTHKPL------IXXXXXXXXXXXXXXXXXXXXATNYHALXXXXXXXLVTTALEDQVLNKGNNGYYHGSVILQNSDVSGIG---NEEQDDDEINYCGTDDVFMSSFLNSLINEDGFNAQHQLHQMXXXXXXXXXXXXXXXXXXDPLMSHPS--TFAFGAGWENPIMSSGYNGFNQNESKKFSHDP 552 KKLISQGIDPRTHKPL + + + + Q+ GN+G S +QNSD SG G + ++DD++N CGTDDVF SSFLNSLINED F QH L Q D L+S S +F FG WE M+S + SK+F+ P Sbjct: 127 KKLISQGIDPRTHKPLNPNSSSVDVKASSSKAKAVMNPNPNPNPSPSEKAAANKEAGNFKSDNQYQIGAAGNDG----SANIQNSDGSGTGLRSSNNEEDDDLN-CGTDDVF-SSFLNSLINEDVFPGQHHLQQQ--------HHGGLIAPGSDALISTSSVQSFGFGTSWEAAAMTSTSVFSQIDHSKRFNDQP 307
BLAST of CV091091 vs. TrEMBL
Match: Q2TCH0|Q2TCH0_PETHY (PH4 OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.808e-7 Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 1 Query: 1 KKLISQGIDPRTHKPLIXXXXXXXXXXXXXXXXXXXXATNYHALXXXXXXXLVTTALEDQVLNKGN----------NGYYHGSVILQNSDVSGIGNEEQDDDEINYCGTDDVFMSSFLNSLINEDGFNAQHQ 366 KKLIS GIDPRTHKPL ++ + L +++ ++ L K N + Y +++ + D I ++D E+N C TDDVF SSFLNSLINED F Q+Q Sbjct: 125 KKLISHGIDPRTHKPLKNSNSSSDDITNKLASSSPPSSSKANDLNPILSPTYISSFQMEEPLGKINTHPGEITSLDDQYQSNAILAEYGDDLNIAVTIEEDVEMNCC-TDDVF-SSFLNSLINEDMFACQNQ 254
BLAST of CV091091 vs. TrEMBL
Match: B9T1E5|B9T1E5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1360980 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 4.790e-7 Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 235 SDVSGIGNEEQDDDEINYCG----TDDVFMSSFLNSLINEDGFNA-QHQLHQMXXXXXXXXXXXXXXXXXXDPLMS-HPSTFAFGAGWENPIMSSGYNGFNQN 525 S++ G+ NEE D+D INYC TDDVF SSF++SLINE+ F + QHQ+ Q DPL+S + S GWE+ + S + FNQN Sbjct: 5 SNIQGLSNEEADED-INYCNNDYCTDDVF-SSFIDSLINEEAFTSQQHQMQQQ-------QQAIYGIVPSSDPLVSINASALGLATGWESAALMS--STFNQN 96
BLAST of CV091091 vs. Vitis vinifera peptide
Match: GSVIVT01025452001 (assembled CDS) HSP 1 Score: 84.3445 bits (207), Expect = 4.892e-17 Identity = 73/190 (38.42%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 1 KKLISQGIDPRTHKPLIXXXXXXXXXXXXXXXXXXXXATNYHALXXXXXXXLVTTALEDQVLNKGNNGYYHGSVILQNSDVSGIG---NEEQDDDEINYCGTDDVFMSSFLNSLINEDGFNAQHQLHQMXXXXXXXXXXXXXXXXXXDPLMSHPS--TFAFGAGWENPIMSSGYNGFNQ-NESKKFSHDP 552 KKLISQGIDPRTHKPL A N+ + + Q+ GN+G S +QNSD SG G + ++DD++N CGTDDVF SSFLNSLINED F QH L Q D L+S S +F FG WE M+S + F+Q + SK+F+ P Sbjct: 127 KKLISQGIDPRTHKPL---NPNSSVDVKASSSKAKAEAGNFKSDN------------QYQIGAAGNDG----SANIQNSDGSGTGLRSSNNEEDDDLN-CGTDDVF-SSFLNSLINEDLFPGQHHLQQQ--------HHGGLIAPGSDALISTSSVQSFGFGTSWEAAAMTS-TSAFSQIDHSKRFNDQP 286 The following BLAST results are available for this feature:
BLAST of CV091091 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV091091 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV091091 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 4
BLAST of CV091091 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV091091 ID=CV091091; Name=CV091091; organism=Vaccinium corymbosum; type=EST; length=720bpback to top |