HO054805 | GDV

EST Overview


Name	HO054805
Unique Name	HO054805
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	500

Libraries


Library Name	Type
LIBEST_026368 Short-term aluminum-stress in root cv. Brigitta cDNA-AFLP	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.943e-40
Identity = 83/138 (60.14%), Postives = 91/138 (65.94%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVP TLK                                    DR+GYRG PRG  G++GG+KGGAPAE+Q
Sbjct:   19 GVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 8.163e-39
Identity = 82/138 (59.42%), Postives = 91/138 (65.94%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    DR+GYR  PR   GE+GG+KGGAPA+YQ
Sbjct:   19 GVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDRPRFG----DRDGYRAGPRA-GGEFGGEKGGAPADYQ 151

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.903e-36
Identity = 79/138 (57.25%), Postives = 88/138 (63.77%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    DR+GYRG PRG     G +KGGAPA++Q
Sbjct:   19 GVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDRPRFG----DRDGYRGGPRG-----GDEKGGAPADFQ 147

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.151e-35
Identity = 80/139 (57.55%), Postives = 90/139 (64.75%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVP TLK                                    DR+GYRG P+   GEY GDK GAPA+YQ
Sbjct:   19 GVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRGPPRGDGERRFG------DRDGYRGGPK-SGGEY-GDKAGAPADYQ 149

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.348e-24
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G M  KKDY+  KHPD++ +PNLQVIK MQS KS+ YV+E FAW H+YWYLTN+GIE+LR +L+LP EIVP TLK
Sbjct:   19 GVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLK 93

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.067e-22
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G +  KKD++L KH +IDVPNL VI+ MQS  S+ YV+E F W HYYWYL N+GI++LR +L+LP EIVP TLK
Sbjct:   19 GVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLK 92

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.184e-21
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G M  KKD ++ KHP++   +VPNL V+K MQS KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   19 GVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.184e-21
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G M  KKD ++ KHP++   +VPNL V+K MQS KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   19 GVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.184e-21
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G M  KKD ++ KHP++   +VPNL V+K MQS KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   19 GVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of HO054805 vs. DB:swissprot:display
Match: RS10_BOVIN (40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.184e-21
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G M  KKD ++ KHP++   +VPNL V+K MQS KS+ YV+E FAW H+YWYLTN+GI++LR YL+LP EIVP TL+
Sbjct:   19 GVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLR 95

[Close]

BLAST of HO054805 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s01150.1 ()

HSP 1 Score: 162.925 bits (411), Expect = 9.250e-41
Identity = 86/138 (62.32%), Postives = 91/138 (65.94%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG     GG+KGGAPA+YQ
Sbjct:   19 GVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGGRPFGGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRGVE---GGEKGGAPADYQ 150

[Close]

BLAST of HO054805 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s02900.1 ()

HSP 1 Score: 162.155 bits (409), Expect = 1.578e-40
Identity = 87/138 (63.04%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  GE GG+KGGAPA+YQ
Sbjct:   19 GVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGGRPFGGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRG--GE-GGEKGGAPADYQ 150

[Close]

BLAST of HO054805 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s07180.1 ()

HSP 1 Score: 162.155 bits (409), Expect = 1.578e-40
Identity = 87/138 (63.04%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  GE GG+KGGAPA+YQ
Sbjct:   19 GVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGGRPFGGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRG--GE-GGEKGGAPADYQ 150

[Close]

BLAST of HO054805 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s04190.1 ()

HSP 1 Score: 160.229 bits (404), Expect = 5.996e-40
Identity = 84/138 (60.87%), Postives = 91/138 (65.94%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWM+YYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  G+   +KGGAPA+YQ
Sbjct:   19 GVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQSKPAGDRPRFG-----------------------DRDGYRGGPRGGEGD---EKGGAPADYQ 130

[Close]

BLAST of HO054805 vs. P. persica 1.0 peptide
Match: ppa012085m ()

HSP 1 Score: 162.155 bits (409), Expect = 1.145e-40
Identity = 84/138 (60.87%), Postives = 90/138 (65.22%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK                                    DR+GYR  PR   G++ GDKGGAPA+Y+
Sbjct:   19 GVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLKKQAKPPGRPLGPSGDRPRGPPRFDGGERRFG-----DRDGYRSGPRAPGGDF-GDKGGAPADYR 150

[Close]

BLAST of HO054805 vs. P. persica 1.0 peptide
Match: ppa012109m ()

HSP 1 Score: 162.155 bits (409), Expect = 1.145e-40
Identity = 84/138 (60.87%), Postives = 90/138 (65.22%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK                                    DR+GYR  PR   G++ GDKGGAPA+Y+
Sbjct:   19 GVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLKKQAKPPGRPLGPSGDRPRGPPRFDGGERRFG-----DRDGYRSGPRAPGGDF-GDKGGAPADYR 150

[Close]

BLAST of HO054805 vs. P. persica 1.0 peptide
Match: ppa012124m ()

HSP 1 Score: 162.155 bits (409), Expect = 1.145e-40
Identity = 84/138 (60.87%), Postives = 90/138 (65.22%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK                                    DR+GYR  PR   G++ GDKGGAPA+Y+
Sbjct:   19 GVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLKKQAKPPGRPLGPSGDRPRGPPRFDGGERRFG-----DRDGYRSGPRAPGGDF-GDKGGAPADYR 150

[Close]

BLAST of HO054805 vs. P. persica 1.0 peptide
Match: ppa016316m ()

HSP 1 Score: 136.732 bits (343), Expect = 5.152e-33
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLK 222
            G    KKD NLAKHP+I+VPNLQVIKLMQSFKSKEY+RETFAWMHYYWYLTNDGIEFLR YLNLPSEIVP TLK
Sbjct:   38 GVCYAKKDDNLAKHPEINVPNLQVIKLMQSFKSKEYLRETFAWMHYYWYLTNDGIEFLRNYLNLPSEIVPATLK 111

[Close]

BLAST of HO054805 vs. TrEMBL
Match: Q2XPV4|Q2XPV4_SOLTU (40S ribosomal protein S10-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.329e-42
Identity = 88/138 (63.77%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYR  PRG  GE+GG+KGGAPA+YQ
Sbjct:   19 GVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDRPRFG----DRDGYRAGPRGPPGEFGGEKGGAPADYQ 152

[Close]

BLAST of HO054805 vs. TrEMBL
Match: D7TV58|D7TV58_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019409001 PE=4 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.187e-41
Identity = 90/138 (65.22%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  GE+ GDKGGAPA+YQ
Sbjct:   49 GVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVKPAGRPMGPPGDRPRGPPRFEGDRPRFG-----DRDGYRGGPRGPPGEF-GDKGGAPADYQ 180

[Close]

BLAST of HO054805 vs. TrEMBL
Match: Q2XTB2|Q2XTB2_SOLTU (40S ribosomal protein S10-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.025e-41
Identity = 88/138 (63.77%), Postives = 92/138 (66.67%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYR  PRG  GE+GG+KGGAPA+YQ
Sbjct:   19 GVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDRPRYG----DRDGYRAGPRGPPGEFGGEKGGAPADYQ 152

[Close]

BLAST of HO054805 vs. TrEMBL
Match: B9RIS9|B9RIS9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1582170 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.454e-41
Identity = 86/138 (62.32%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  G++GG+KGGAPA++Q
Sbjct:   19 GVCYAKKDFNLAKHPHIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSARPAGRPMGGPPGDRPRGPPRFDGDRPRFG----DRDGYRGGPRGGGGDFGGEKGGAPADFQ 152

[Close]

BLAST of HO054805 vs. TrEMBL
Match: C5YGH8|C5YGH8_SORBI (Putative uncharacterized protein Sb06g016800 OS=Sorghum bicolor GN=Sb06g016800 PE=4 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.714e-40
Identity = 84/138 (60.87%), Postives = 92/138 (66.67%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVP TLK                                +   DR+GYRG PRG  G++GGDKGGAPAE+Q
Sbjct:   19 GVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPPRGPGRFEGDRPRFG--DRDGYRGGPRGAPGDFGGDKGGAPAEFQ 154

[Close]

BLAST of HO054805 vs. TrEMBL
Match: Q94DM7|Q94DM7_ORYSJ (Os01g0962600 protein OS=Oryza sativa subsp. japonica GN=P0483G10.27 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.239e-40
Identity = 82/138 (59.42%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKDYNLAKHP +DVPNL+VIKLMQSFKSKEYVRETF+W HYYWYLTNDGIE LR+YLNLPSE+VPNTLK                                    DR+GYRG PRG  G++GG+KGGAPAE+Q
Sbjct:   19 GVLYAKKDYNLAKHPKVDVPNLEVIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153

[Close]

BLAST of HO054805 vs. TrEMBL
Match: A2WZD5|A2WZD5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05313 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.239e-40
Identity = 82/138 (59.42%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKDYNLAKHP +DVPNL+VIKLMQSFKSKEYVRETF+W HYYWYLTNDGIE LR+YLNLPSE+VPNTLK                                    DR+GYRG PRG  G++GG+KGGAPAE+Q
Sbjct:   19 GVLYAKKDYNLAKHPKVDVPNLEVIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153

[Close]

BLAST of HO054805 vs. TrEMBL
Match: A9NZ81|A9NZ81_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.514e-40
Identity = 87/139 (62.59%), Postives = 95/139 (68.35%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGN-PRGQSGEYGGDKGGAPAEYQ 414
            G +  KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRE+FAWMHYYWYLTNDGIE+LRTYLNLPSEIVP TLK                                +   DR+GYRG  PRG  G++ GDKGGAPAEYQ
Sbjct:   19 GVLYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRESFAWMHYYWYLTNDGIEYLRTYLNLPSEIVPATLKKSAKPLGRPMGGGPPGGDRPRGPPRFEGDRPRFG--DRDGYRGGPPRGAPGDF-GDKGGAPAEYQ 154

[Close]

BLAST of HO054805 vs. TrEMBL
Match: B9RCG9|B9RCG9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1688110 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.111e-39
Identity = 86/138 (62.32%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  GE+ GDKGGAPA+Y+
Sbjct:   19 GVCYAKKDFNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQSKPLGRPMGGPPGDRPRGPSRFDGERRFGG----DRDGYRGGPRGPPGEF-GDKGGAPADYR 151

[Close]

BLAST of HO054805 vs. TrEMBL
Match: Q6Z105|Q6Z105_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=OSJNBa0040I22.20 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.475e-39
Identity = 83/138 (60.14%), Postives = 91/138 (65.94%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVP TLK                                    DR+GYRG PRG  G++GG+KGGAPAE+Q
Sbjct:   19 GVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRF---GDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153

[Close]

BLAST of HO054805 vs. Vitis vinifera peptide
Match: GSVIVT01028854001 (assembled CDS)

HSP 1 Score: 176.407 bits (446), Expect = 5.045e-45
Identity = 89/138 (64.49%), Postives = 94/138 (68.12%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  GE+GGDKGGAPA++Q
Sbjct:   54 GVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVKPPGRPMGGPPGDRPRGPPRFDGDRPRFG----DRDGYRGGPRGPPGEFGGDKGGAPADFQ 187

[Close]

BLAST of HO054805 vs. Vitis vinifera peptide
Match: GSVIVT01019409001 (assembled CDS)

HSP 1 Score: 172.555 bits (436), Expect = 7.285e-44
Identity = 90/138 (65.22%), Postives = 93/138 (67.39%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP TLK                                    DR+GYRG PRG  GE+ GDKGGAPA+YQ
Sbjct:   49 GVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVKPAGRPMGPPGDRPRGPPRFEGDRPRFG-----DRDGYRGGPRGPPGEF-GDKGGAPADYQ 180

[Close]

BLAST of HO054805 vs. TAIR peptide
Match: AT5G52650.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:21355781-21357003 REVERSE LENGTH=179)

HSP 1 Score: 159.458 bits (402), Expect = 9.041e-40
Identity = 82/138 (59.42%), Postives = 91/138 (65.94%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    DR+GYR  PR   GE+GG+KGGAPA+YQ
Sbjct:   19 GVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDRPRFG----DRDGYRAGPRA-GGEFGGEKGGAPADYQ 151

[Close]

BLAST of HO054805 vs. TAIR peptide
Match: AT4G25740.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=177)

HSP 1 Score: 150.984 bits (380), Expect = 3.216e-37
Identity = 79/138 (57.25%), Postives = 88/138 (63.77%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                    DR+GYRG PRG     G +KGGAPA++Q
Sbjct:   19 GVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDRPRFG----DRDGYRGGPRG-----GDEKGGAPADFQ 147

[Close]

BLAST of HO054805 vs. TAIR peptide
Match: AT5G41520.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610583 REVERSE LENGTH=180)

HSP 1 Score: 146.362 bits (368), Expect = 7.920e-36
Identity = 80/139 (57.55%), Postives = 90/139 (64.75%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            G +  KKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVP TLK                                    DR+GYRG P+   GEY GDK GAPA+YQ
Sbjct:   19 GVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRGPPRGDGERRFG------DRDGYRGGPK-SGGEY-GDKAGAPADYQ 149

[Close]

BLAST of HO054805 vs. TAIR peptide
Match: AT4G25740.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=149)

HSP 1 Score: 137.502 bits (345), Expect = 3.679e-33
Identity = 76/140 (54.29%), Postives = 86/140 (61.43%), Query Frame = 1

Query:    1 GCMXCKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYR--GNPRGQSGEYGGDKGGAPAEYQ 414
            G    KKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VP TLK                                  +  + G R  G PRG     G +KGGAPA++Q
Sbjct:   19 GVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLK----------------------------------KSAKPGGRPFGGPRG-----GDEKGGAPADFQ 119

[Close]

BLAST of HO054805 vs. TAIR peptide
Match: AT5G41520.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610203 REVERSE LENGTH=134)

HSP 1 Score: 114.39 bits (285), Expect = 3.335e-26
Identity = 62/111 (55.86%), Postives = 68/111 (61.26%), Query Frame = 1

Query:   82 MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPNTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNERDREGYRGNPRGQSGEYGGDKGGAPAEYQ 414
            MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVP TLK                                    DR+GYRG P+   GEY GDK GAPA+YQ
Sbjct:    1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRGPPRGDGERRFG------DRDGYRGGPK-SGGEY-GDKAGAPADYQ 103

The following BLAST results are available for this feature:

BLAST of HO054805 vs. DB:swissprot:display
BLAST of HO054805 vs. Populus trichocarpa peptide v2.0
BLAST of HO054805 vs. P. persica 1.0 peptide
BLAST of HO054805 vs. TrEMBL
BLAST of HO054805 vs. Vitis vinifera peptide
BLAST of HO054805 vs. TAIR peptide

BLAST of HO054805 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS10_ORYSJ	1.943e-40	60.14	40S ribosomal protein S10 OS=Oryza sativa subsp. j...	[more]
RS103_ARATH	8.163e-39	59.42	40S ribosomal protein S10-3 OS=Arabidopsis thalian...	[more]
RS101_ARATH	2.903e-36	57.25	40S ribosomal protein S10-1 OS=Arabidopsis thalian...	[more]
RS102_ARATH	7.151e-35	57.55	40S ribosomal protein S10-2 OS=Arabidopsis thalian...	[more]
RS10_SPOFR	4.348e-24	66.67	40S ribosomal protein S10 OS=Spodoptera frugiperda...	[more]
RS10_LUMRU	9.067e-22	60.81	40S ribosomal protein S10 OS=Lumbricus rubellus GN...	[more]
RS10_RAT	1.184e-21	59.74	40S ribosomal protein S10 OS=Rattus norvegicus GN=...	[more]
RS10_MOUSE	1.184e-21	59.74	40S ribosomal protein S10 OS=Mus musculus GN=Rps10...	[more]
RS10_HUMAN	1.184e-21	59.74	40S ribosomal protein S10 OS=Homo sapiens GN=RPS10...	[more]
RS10_BOVIN	1.184e-21	59.74	40S ribosomal protein S10 OS=Bos taurus GN=RPS10 P...	[more]

BLAST of HO054805 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0017s01150.1	9.250e-41	62.32	[more]
POPTR_0013s02900.1	1.578e-40	63.04	[more]
POPTR_0004s07180.1	1.578e-40	63.04	[more]
POPTR_0005s04190.1	5.996e-40	60.87	[more]

BLAST of HO054805 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 4


Match Name	E-value	Identity
ppa012085m	1.145e-40	60.87	[more]
ppa012109m	1.145e-40	60.87	[more]
ppa012124m	1.145e-40	60.87	[more]
ppa016316m	5.152e-33	86.49	[more]

BLAST of HO054805 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q2XPV4\|Q2XPV4_SOLTU	5.329e-42	63.77	40S ribosomal protein S10-like protein OS=Solanum ...	[more]
D7TV58\|D7TV58_VITVI	1.187e-41	65.22	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q2XTB2\|Q2XTB2_SOLTU	2.025e-41	63.77	40S ribosomal protein S10-like OS=Solanum tuberosu...	[more]
B9RIS9\|B9RIS9_RICCO	3.454e-41	62.32	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
C5YGH8\|C5YGH8_SORBI	1.714e-40	60.87	Putative uncharacterized protein Sb06g016800 OS=So...	[more]
Q94DM7\|Q94DM7_ORYSJ	2.239e-40	59.42	Os01g0962600 protein OS=Oryza sativa subsp. japoni...	[more]
A2WZD5\|A2WZD5_ORYSI	2.239e-40	59.42	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A9NZ81\|A9NZ81_PICSI	6.514e-40	62.59	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9RCG9\|B9RCG9_RICCO	1.111e-39	62.32	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
Q6Z105\|Q6Z105_ORYSJ	2.475e-39	60.14	40S ribosomal protein S10 OS=Oryza sativa subsp. j...	[more]

BLAST of HO054805 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01028854001	5.045e-45	64.49	assembled CDS	[more]
GSVIVT01019409001	7.285e-44	65.22	assembled CDS	[more]

BLAST of HO054805 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G52650.1	9.041e-40	59.42	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.1	3.216e-37	57.25	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.1	7.920e-36	57.55	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.2	3.679e-33	54.29	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.2	3.335e-26	55.86	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 1..78 score: 1.2
None	No IPR available	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..161 score: 9.8
None	No IPR available	SEG	seg	seg	coord: 75..106 score: NAcoord: 139..162 score
None	No IPR available	SEG	seg	seg	coord: 68..91 score
None	No IPR available	SEG	seg	seg	coord: 12..40 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO054805 ID=HO054805; Name=HO054805; organism=Vaccinium corymbosum; type=EST; length=500bp
GGGTGTATGTNATGCAAGAAAGATTACAATCTTGCCAAGCACCCAGATAT
TGATGTCCCAAATCTGCAAGTTATCAAGCTGATGCAGAGCTTCAAATCGA
AAGAGTATGTGCGGGAGACATTTGCTTGGATGCACTACTATTGGTATTTG
ACAAATGATGGCATTGAATTTCTGAGGACATACCTCAACTTGCCATCTGA
GATCGTTCCCAACACGCTGAAAAGGGCAGCTCGCCCTATTCCTGCTGGTG
GTAGGCCTGGTGGACCCCCTGGTGATCGCCCACGTGGTCCTCCTAGATTT
GAAGGAGATAGGCCAAGGTATAACGAACGTGATCGTGAAGGCTACCGTGG
AAATCCAAGAGGTCAGTCTGGCGAGTATGGAGGTGACAAGGGAGGTGCCC
CTGCTGAATACCAACCTTCTTTCAGGAGGCCTGGATTCGGTCGCGGTGGT
GGCAGTTTTGGTGCAGGGCCTGCTGCTGGTGGAAGTTTCGAGTAAAGAAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K02947	RP-S10e, RPS10; small subunit ribosomal protein S10e

Vocabulary: **KEGG PATHWAY**
Term	Definition
ko03010	Ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR005326	Plectin_eS10_N
noIPR	unintegrated