CV190183

EST Overview
NameCV190183
Unique NameCV190183
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length588
Libraries
Library NameType
LIBEST_016374 Vco01cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV190183 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s17120.1 ()

HSP 1 Score: 70.8626 bits (172), Expect = 6.531e-13
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 2
Query:   71 ESMLSFNLDAAQEHRALSLLSTDSWA---PANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSA--NENTHFQEFQLFK 349
            E+   F+    + HRALSLLSTDSW    P +I  +Q  +H N  +  Q ++H VPQ  PLAS EYW++++ ++   +HT S+  + + + QEFQL +
Sbjct:  376 EATPEFHRATPEFHRALSLLSTDSWGSCEPQSISFEQP-MHANHTSMPQSVLHTVPQSSPLASSEYWRTEQQSNDPQVHTLSSRTDGSNYLQEFQLLR 472          
BLAST of CV190183 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s14680.3 ()

HSP 1 Score: 66.2402 bits (160), Expect = 1.609e-11
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2
Query:   44 PEVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAP---ANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSA--NENTHFQEFQLFKAPY 358
            P+VF+QG + S L+ N++ A +  RALSLLST SW      +  LDQ  +  N  + TQP+++   Q  P+AS E  + ++ +    +H+     N N   QEFQL KAPY
Sbjct:  352 PQVFSQGFEGSALTSNIEVAPDLRRALSLLSTTSWGSNEHGSTSLDQLML-ANQTSMTQPMINAELQNCPVASSENARMEQASLESRVHSLDLHDNGNVQLQEFQLLKAPY 461          
BLAST of CV190183 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s14680.2 ()

HSP 1 Score: 66.2402 bits (160), Expect = 1.609e-11
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2
Query:   44 PEVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAP---ANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSA--NENTHFQEFQLFKAPY 358
            P+VF+QG + S L+ N++ A +  RALSLLST SW      +  LDQ  +  N  + TQP+++   Q  P+AS E  + ++ +    +H+     N N   QEFQL KAPY
Sbjct:  352 PQVFSQGFEGSALTSNIEVAPDLRRALSLLSTTSWGSNEHGSTSLDQLML-ANQTSMTQPMINAELQNCPVASSENARMEQASLESRVHSLDLHDNGNVQLQEFQLLKAPY 461          
BLAST of CV190183 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s14680.1 ()

HSP 1 Score: 66.2402 bits (160), Expect = 1.609e-11
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2
Query:   44 PEVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAP---ANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSA--NENTHFQEFQLFKAPY 358
            P+VF+QG + S L+ N++ A +  RALSLLST SW      +  LDQ  +  N  + TQP+++   Q  P+AS E  + ++ +    +H+     N N   QEFQL KAPY
Sbjct:  352 PQVFSQGFEGSALTSNIEVAPDLRRALSLLSTTSWGSNEHGSTSLDQLML-ANQTSMTQPMINAELQNCPVASSENARMEQASLESRVHSLDLHDNGNVQLQEFQLLKAPY 461          
BLAST of CV190183 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s13890.1 ()

HSP 1 Score: 63.5438 bits (153), Expect = 1.043e-10
Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 2
Query:   56 TQGSKESMLSFNLDAAQE-HRALSLLSTDSWA---PANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSAN 313
            ++G +E ++    +AA E HRALSLLS +SW    P +I  +Q  +H N  +TTQ ++  +PQ  PLAS EYW++++P+    +HT +++
Sbjct:  349 SKGLEEYIIPSKAEAAPESHRALSLLSNNSWGSREPQSISFEQP-VHTN--HTTQSVLQVIPQNSPLASSEYWRTEQPSTDSQVHTLTSH 435          
BLAST of CV190183 vs. P. persica 1.0 peptide
Match: ppa005013m ()

HSP 1 Score: 81.2629 bits (199), Expect = 3.471e-16
Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 2
Query:   26 PSKHDKPEVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAPAN---IPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQ----RPTDSRLMHTFSANENTHFQEFQLFKAPYE 361
            PSK    EV  +G++ESM+SFNL A Q+ HRALSLLST SW       + LD  +      N  QP M  + QGLP++S  YWQ+Q       ++ + H+ S   N   Q+   FK PYE
Sbjct:  354 PSKGTAAEVLNRGAEESMISFNLGATQDFHRALSLLSTSSWVSGEAKPVALDNNTNQNYQNNIPQPGMQAMTQGLPVSS-GYWQTQHLSLNTQEAHVSHSHSNGSNHFHQDLHQFKGPYE 472          
BLAST of CV190183 vs. TrEMBL
Match: D7TAZ1|D7TAZ1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010496001 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.115e-17
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 2
Query:   29 SKHDKPEVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAPAN---IPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRP-TDSRLMHTFSANE-NTHFQEFQLFKAPYE 361
            SK    EV  QG  +SM+S NLD +Q+  RALSLLST+SW       IP D   +HVN  +  Q +MH V QG+  ++ E+W+++ P TDSR+    S  + NTHFQEF+LFKAPYE
Sbjct:  294 SKGAIAEVLNQGLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHP-MHVNQTSMPQSIMHAVSQGMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYE 409          
BLAST of CV190183 vs. TrEMBL
Match: B9RMD6|B9RMD6_RICCO (LIGULELESS1 protein, putative OS=Ricinus communis GN=RCOM_1079880 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.564e-16
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   20 VFPSKHDKP--EVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAPANIPLDQQSIHVNLANTTQP--LMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSA--NENTHFQEFQLFKAPYE 361
            + PSK   P  EV  Q  +ES++S N+DA Q+ HRALSLLST+SW               L++T  P  ++H VPQGLPL S +YW++++   +  +HT ++  + +++FQEFQL +APY+
Sbjct:  354 LLPSKAKVPIAEVLNQDLEESIISSNVDATQDLHRALSLLSTNSWGSCEPKSFSHERPAQLSHTGMPQSVLHAVPQGLPLTSSDYWRAEQHITNSRVHTLTSQNDSSSYFQEFQLLRAPYD 474          
BLAST of CV190183 vs. TrEMBL
Match: A5AK13|A5AK13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026287 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.200e-8
Identity = 43/102 (42.16%), Postives = 54/102 (52.94%), Query Frame = 2
Query:   74 SMLSFNLDAAQE-HRALSLLSTDSWA---PANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSANEN--THFQEFQLFKAPYE 361
            S ++ N + A +  RALSLLST+SW    P    LDQ  +HVN  +  QP  H  P    LAS E    Q+       H+   + N  + FQEFQLFKAPYE
Sbjct:  938 SAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQL-MHVNQXSMAQPTXHAEPHNWALASSENMHVQQTPSETRGHSLDLHNNGSSMFQEFQLFKAPYE 1038          
BLAST of CV190183 vs. TrEMBL
Match: B9GMK3|B9GMK3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640027 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.047e-8
Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 2
Query:   62 GSKESMLSFNLDAAQE-HRALSLLSTDSWA---PANIPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRPTDSRLMHTFSAN 313
            G +E ++    +AA E HRALSLLS +SW    P +I  +Q  +H N  +TTQ ++  +PQ  PLAS EYW++++P+    +HT +++
Sbjct:   12 GLEEYIIPSKAEAAPESHRALSLLSNNSWGSREPQSISFEQP-VHTN--HTTQSVLQVIPQNSPLASSEYWRTEQPSTDSQVHTLTSH 96          
BLAST of CV190183 vs. Vitis vinifera peptide
Match: GSVIVT01010496001 (assembled CDS)

HSP 1 Score: 91.6633 bits (226), Expect = 2.200e-19
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 2
Query:   29 SKHDKPEVFTQGSKESMLSFNLDAAQE-HRALSLLSTDSWAPAN---IPLDQQSIHVNLANTTQPLMHGVPQGLPLASPEYWQSQRP-TDSRLMHTFSANE-NTHFQEFQLFKAPYE 361
            SK    EV  QG  +SM+S NLD +Q+  RALSLLST+SW       IP D   +HVN  +  Q +MH V QG+  ++ E+W+++ P TDSR+    S  + NTHFQEF+LFKAPYE
Sbjct:  294 SKGAIAEVLNQGLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHP-MHVNQTSMPQSIMHAVSQGMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYE 409          
The following BLAST results are available for this feature:
BLAST of CV190183 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
POPTR_0003s17120.16.531e-1339.80[more]
POPTR_0018s14680.31.609e-1138.74[more]
POPTR_0018s14680.21.609e-1138.74[more]
POPTR_0018s14680.11.609e-1138.74[more]
POPTR_0001s13890.11.043e-1038.89[more]
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BLAST of CV190183 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa005013m3.471e-1641.67[more]
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BLAST of CV190183 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
D7TAZ1|D7TAZ1_VITVI4.115e-1748.72Whole genome shotgun sequence of line PN40024, sca... [more]
B9RMD6|B9RMD6_RICCO1.564e-1641.32LIGULELESS1 protein, putative OS=Ricinus communis ... [more]
A5AK13|A5AK13_VITVI1.200e-842.16Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GMK3|B9GMK3_POPTR2.047e-839.77Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of CV190183 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010104960012.200e-1948.72assembled CDS[more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV190183 ID=CV190183; Name=CV190183; organism=Vaccinium corymbosum; type=EST; length=588bp
CGGCCAGAATACCAANTAAGTTTTTCCATCCAAGCACGACAAGCCCGAGG
TTTTCACTCAAGGTTCGAAGGAGTCCATGCTCTCTTTTAACTTGGATGCA
GCACAAGAACACCGTGCTCTCTCTCTTCTGTCAACTGATTCTTGGGCCCC
AGCAAACATTCCACTGGACCAACAATCCATTCATGTAAACCTTGCCAACA
CGACTCAGCCTCTGATGCATGGAGTGCCCCAAGGTTTGCCACTAGCTTCA
CCAGAGTACTGGCAGTCTCAACGCCCGACTGATTCTCGCTTGATGCACAC
CTTTTCTGCAAATGAAAACACCCATTTCCAGGAATTCCAGCTCTTCAAAG
CACCCTATGAGAACGGCCTTTACAACAACCTATTGAATTAAAAACTGGAA
ATCCGTCTTGTGGTTTCCCGTTTTTTAATGAGGTAAGGTTCTAAGATCTG
TGGTTAGGTTTAAGGGTTCTCTTACGATGTTACGGAAACCGGTCACGAAC
CGGTCAATCCAACCATTTCTATATCCGACTAGTTATTTTTGCTTTAAGAT
TTTTCTAGTCATCGATCATTTGGGTGGGATGAAGCTTT
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