CV190392 | GDV

EST Overview


Name	CV190392
Unique Name	CV190392
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	620

Libraries


Library Name	Type
LIBEST_016374 Vco01	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV190392 vs. DB:swissprot:display
Match: UBP2_ARATH (Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UBP2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.769e-19
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 3

Query:   21 EGEVSSSFV--GYEP-DACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E SSSFV   +EP ++ F  FG LF+EPE  EGP   P S        E +  GF+  + SESDP+E+D+SD PVS+E CL  FTK E+LSD++AW+CENCS
Sbjct:  640 ECEASSSFVTGDHEPQNSDFVDFGGLFDEPETTEGPVFGPPSKA------EASGVGFMAFS-SESDPEEIDDSDLPVSVERCLGHFTKHEILSDDNAWNCENCS 736

[Close]

BLAST of CV190392 vs. DB:swissprot:display
Match: UBP1_ARATH (Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana GN=UBP1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.190e-13
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPDACFDGF---GDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            +GE  SSF+  + +   D       +F++    E P   P S        +++E GF VA  S+SDP  +D SDSPVS++ CLA FTK E+LS+++AWHCENCS
Sbjct:  730 KGETFSSFMSGDNERNIDYVEFTNRIFDDRGTSERPVFGPPSKA------KVSEAGF-VAVSSDSDPAVLDESDSPVSVDRCLAQFTKHEILSEDNAWHCENCS 826

[Close]

BLAST of CV190392 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s32280.1 ()

HSP 1 Score: 117.087 bits (292), Expect = 8.718e-27
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPD-ACFDGFGDLFNEPEI----VEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E  SSFVG   D A FDG GDLFNEPE+    V GP+L          GNE+A   F+    SESDPDEVD+SDSPVS+ESCLALF KPELLS+++AW CENCS
Sbjct:  607 ESEAGSSFVGCGQDEAEFDGIGDLFNEPEVSAAPVAGPSL----------GNEVALPSFIAGISSESDPDEVDDSDSPVSLESCLALFIKPELLSNDNAWECENCS 702

[Close]

BLAST of CV190392 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s08270.1 ()

HSP 1 Score: 113.235 bits (282), Expect = 1.259e-25
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPD-ACFDGFGDLFNEPEI----VEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E SSSFVG E D A FDG GDLFNEPE+    V GP+L           NE+A   F+    SESDPDEVD++DSPVSIESCL+ F KPELLS+++AW CENCS
Sbjct:  577 EAEASSSFVGCEQDEAEFDGIGDLFNEPEVSAAPVAGPSLP----------NEVAGPVFIAGIGSESDPDEVDDTDSPVSIESCLSHFVKPELLSNDNAWECENCS 672

[Close]

BLAST of CV190392 vs. P. persica 1.0 peptide
Match: ppa000917m ()

HSP 1 Score: 119.783 bits (299), Expect = 9.639e-28
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 3

Query:   18 REGEVSSSFVGYEPDACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            RE E SSS VG   D  FDGFGDLFNEPE+  GP  +P        G    ETGF+    SESDPDEVD+SDSPVS+ESCLA F KPELL++E+AWHCENCS
Sbjct:  569 REDEASSSVVGGGQDE-FDGFGDLFNEPEVAAGPTARPSV------GEGGTETGFVA---SESDPDEVDDSDSPVSVESCLAHFIKPELLANENAWHCENCS 660

[Close]

BLAST of CV190392 vs. TrEMBL
Match: A5AXN2|A5AXN2_VITVI (Ubiquitin carboxyl-terminal hydrolase OS=Vitis vinifera GN=VITISV_042515 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.600e-33
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 3

Query:   69 FDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCSXXXXXXXXXXXXXXXNGVSEIQMSGVDNRIQSAPSNLTNDRPFPNDRDI-RENVLTTFDESL--VSENGKINDNQNDKKEISEEAVLILSSFPV*TEGSG 614
            FDGFG LF+EPE   G NL+PL  D +   NE+  TGF+  N SESDPDEVDNS+S VSI+SCL  FTKPELLS+EHAWHCENCS               N +S+IQM+G +++IQ+ P  L  D      +DI  ENV       L  ++ + +I+D+ + +  +  +    +   PV ++  G
Sbjct:  642 FDGFGGLFDEPEAASGVNLQPLLGDNSFDANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLSNEHAWHCENCSKILRDQRIKTRTNLPNTISKIQMNGSEDKIQNGPFGLCKDISPDEVKDIDNENVKNDGHNILGGLAPHDRISDDDSKQNGLKLQTSQTVEVNPVVSQCEG 826

[Close]

BLAST of CV190392 vs. TrEMBL
Match: B9RWG7|B9RWG7_RICCO (Ubiquitin carboxyl-terminal hydrolase OS=Ricinus communis GN=RCOM_1019320 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.913e-26
Identity = 87/178 (48.88%), Postives = 101/178 (56.74%), Query Frame = 3

Query:   33 SSSFVGYEPD-ACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCSXXXXXXXXXXXXXXXNGVSEIQMSGVDNRIQSAPSNLTNDRPFP---NDRDIRENVLTTFDE---SLVSENGKIN-DNQN 542
            +SS VG   D A FDGFGDLFNEPE+  GP   P         N  AETGF+ AN SESDPDEVDNSDSPVSIESCLA F KPELLS+++AW CENCS                 V E  + G   +IQS PS+L  D        D +   N  T F+    SLVS++  I+  NQN
Sbjct:  608 ASSVVGCGQDEADFDGFGDLFNEPEVSSGPVSGPSLA------NGTAETGFIAANNSESDPDEVDNSDSPVSIESCLAHFIKPELLSNDNAWECENCSKTLQRQRLEAKKKAKTTV-ETMIIGGKAQIQS-PSSLEKDNLCSIEVKDHNGGINTDTCFNSSGASLVSDDENIDRTNQN 777

[Close]

BLAST of CV190392 vs. TrEMBL
Match: B9GFW8|B9GFW8_POPTR (Ubiquitin carboxyl-terminal hydrolase OS=Populus trichocarpa GN=POPTRDRAFT_847131 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.050e-24
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPD-ACFDGFGDLFNEPEI----VEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E  SSFVG   D A FDG GDLFNEPE+    V GP+L          GNE+A   F+    SESDPDEVD+SDSPVS+ESCLALF KPELLS+++AW CENCS
Sbjct:  607 ESEAGSSFVGCGQDEAEFDGIGDLFNEPEVSAAPVAGPSL----------GNEVALPSFIAGISSESDPDEVDDSDSPVSLESCLALFIKPELLSNDNAWECENCS 702

[Close]

BLAST of CV190392 vs. TrEMBL
Match: B9IJH8|B9IJH8_POPTR (Ubiquitin carboxyl-terminal hydrolase OS=Populus trichocarpa GN=POPTRDRAFT_778299 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.516e-23
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPD-ACFDGFGDLFNEPEI----VEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E SSSFVG E D A FDG GDLFNEPE+    V GP+L           NE+A   F+    SESDPDEVD++DSPVSIESCL+ F KPELLS+++AW CENCS
Sbjct:  577 EAEASSSFVGCEQDEAEFDGIGDLFNEPEVSAAPVAGPSLP----------NEVAGPVFIAGIGSESDPDEVDDTDSPVSIESCLSHFVKPELLSNDNAWECENCS 672

[Close]

BLAST of CV190392 vs. TrEMBL
Match: D7SNS8|D7SNS8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021053001 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.042e-21
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 3

Query:  132 LSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCSXXXXXXXXXXXXXXXNGVSEIQMSG 398
            + +D +   NE+  TGF+  N SESDPDEVDNS+S VSI+SCL  FTKPELLS+EHAWHCENCS               N +S+IQM+G
Sbjct:  185 IQSDNSFNANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLSNEHAWHCENCSKILWDQRIKTRTNLPNTISKIQMNG 273

[Close]

BLAST of CV190392 vs. TrEMBL
Match: D7KE85|D7KE85_ARALY (Ubiquitin-specific protease 2 OS=Arabidopsis lyrata subsp. lyrata GN=UBP2 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.958e-19
Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = 3

Query:   21 EGEVSSSFV--GYEP-DACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E SSSF    +EP ++ F  FG LF+EPE  EGP   P S        E +  G ++A  SESDP+E+D+SDSPVS+E CLA FTKPE+LSD++AWHCENCS
Sbjct:  606 EFEASSSFGTGDHEPQNSDFVDFGGLFDEPETTEGPVFGPPSKA------EASGVG-IMAFSSESDPEEIDDSDSPVSVERCLAHFTKPEILSDDNAWHCENCS 702

[Close]

BLAST of CV190392 vs. TrEMBL
Match: D7LFL0|D7LFL0_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_669021 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.422e-13
Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 3

Query:   21 EGEVSSSFVG--YEPDACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            +GE  SSF+    E +  ++    LF + E  E P   P S        +++E  F+  + S+SDP  +D+SDSPVS++ CLA FTKPE+LS+++AWHCENCS
Sbjct:  746 KGETFSSFMNGDNERNIDYESINSLFYDRETSERPVFGPPSKA------KVSEACFMAVS-SDSDPAVLDDSDSPVSVDRCLAQFTKPEILSEDNAWHCENCS 841

[Close]

BLAST of CV190392 vs. TrEMBL
Match: Q0J0M6|Q0J0M6_ORYSJ (Ubiquitin carboxyl-terminal hydrolase OS=Oryza sativa subsp. japonica GN=Os09g0505100 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.606e-11
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPDACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E     + VG      + G GD+FNEPE+      K + T  +I          ++A  S S  DEVD+S++PVS+E CLALFT+PELLS+   WHCE CS
Sbjct:  588 EDNAQPASVGDGDQDDYVGLGDMFNEPEVTSEVK-KEIGTVEDID---------VMAWSSNSAEDEVDDSNAPVSVEGCLALFTEPELLSE--PWHCELCS 676

[Close]

BLAST of CV190392 vs. TrEMBL
Match: A2Z2V5|A2Z2V5_ORYSI (Ubiquitin carboxyl-terminal hydrolase OS=Oryza sativa subsp. indica GN=OsI_31949 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.472e-10
Identity = 43/101 (42.57%), Postives = 56/101 (55.45%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPDACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E     + VG      + G GD+FNEPE+      K   T  +I          ++A  S S  DEVD+S++PVS+E CLALFT+PELLS+   WHCE CS
Sbjct:  591 EDNAQPASVGDGDQDDYVGLGDMFNEPEVTSEVK-KETGTVEDID---------VMAWSSNSAEDEVDDSNAPVSVEGCLALFTEPELLSE--PWHCELCS 679

[Close]

BLAST of CV190392 vs. TrEMBL
Match: C5X4P2|C5X4P2_SORBI (Ubiquitin carboxyl-terminal hydrolase OS=Sorghum bicolor GN=Sb02g029180 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.775e-9
Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPDACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E      + G      + G GD+FNEPE+         +++   + +++ +   +  + + +D DEVD+S++PVS+E CLAL+T+PELLS+   W CE+C+
Sbjct:  578 ENNTQPGYCGDVEQDDYIGLGDMFNEPEV---------TSEVKKEASKVEDIDVMAWSSNSAD-DEVDDSNAPVSVEGCLALYTEPELLSE--PWLCEHCT 666

[Close]

BLAST of CV190392 vs. Vitis vinifera peptide
Match: GSVIVT01021053001 (assembled CDS)

HSP 1 Score: 104.375 bits (259), Expect = 3.585e-23
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 3

Query:  132 LSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCSXXXXXXXXXXXXXXXNGVSEIQMSG 398
            + +D +   NE+  TGF+  N SESDPDEVDNS+S VSI+SCL  FTKPELLS+EHAWHCENCS               N +S+IQM+G
Sbjct:  185 IQSDNSFNANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLSNEHAWHCENCSKILWDQRIKTRTNLPNTISKIQMNG 273

[Close]

BLAST of CV190392 vs. TAIR peptide
Match: AT1G04860.1 (| Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2 | chr1:1369306-1372290 REVERSE LENGTH=961)

HSP 1 Score: 93.5893 bits (231), Expect = 9.093e-20
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 3

Query:   21 EGEVSSSFV--GYEP-DACFDGFGDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            E E SSSFV   +EP ++ F  FG LF+EPE  EGP   P S        E +  GF+  + SESDP+E+D+SD PVS+E CL  FTK E+LSD++AW+CENCS
Sbjct:  640 ECEASSSFVTGDHEPQNSDFVDFGGLFDEPETTEGPVFGPPSKA------EASGVGFMAFS-SESDPEEIDDSDLPVSVERCLGHFTKHEILSDDNAWNCENCS 736

[Close]

BLAST of CV190392 vs. TAIR peptide
Match: AT2G32780.1 (| Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 | chr2:13898431-13901870 REVERSE LENGTH=1083)

HSP 1 Score: 73.9442 bits (180), Expect = 7.456e-14
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 3

Query:   21 EGEVSSSFVGYEPDACFDGF---GDLFNEPEIVEGPNLKPLSTDTNIQGNEIAETGFLVANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCS 323
            +GE  SSF+  + +   D       +F++    E P   P S        +++E GF VA  S+SDP  +D SDSPVS++ CLA FTK E+LS+++AWHCENCS
Sbjct:  730 KGETFSSFMSGDNERNIDYVEFTNRIFDDRGTSERPVFGPPSKA------KVSEAGF-VAVSSDSDPAVLDESDSPVSVDRCLAQFTKHEILSEDNAWHCENCS 826

The following BLAST results are available for this feature:

BLAST of CV190392 vs. DB:swissprot:display
BLAST of CV190392 vs. Populus trichocarpa peptide v2.0
BLAST of CV190392 vs. P. persica 1.0 peptide
BLAST of CV190392 vs. TrEMBL
BLAST of CV190392 vs. Vitis vinifera peptide
BLAST of CV190392 vs. TAIR peptide

BLAST of CV190392 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
UBP2_ARATH	8.769e-19	51.92	Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabido...	[more]
UBP1_ARATH	7.190e-13	42.31	Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabido...	[more]

BLAST of CV190392 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0001s32280.1	8.718e-27	60.38		[more]
POPTR_0017s08270.1	1.259e-25	59.43		[more]

BLAST of CV190392 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa000917m	9.639e-28	62.75		[more]

BLAST of CV190392 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A5AXN2\|A5AXN2_VITVI	3.600e-33	43.24	Ubiquitin carboxyl-terminal hydrolase OS=Vitis vin...	[more]
B9RWG7\|B9RWG7_RICCO	1.913e-26	48.88	Ubiquitin carboxyl-terminal hydrolase OS=Ricinus c...	[more]
B9GFW8\|B9GFW8_POPTR	1.050e-24	60.38	Ubiquitin carboxyl-terminal hydrolase OS=Populus t...	[more]
B9IJH8\|B9IJH8_POPTR	1.516e-23	59.43	Ubiquitin carboxyl-terminal hydrolase OS=Populus t...	[more]
D7SNS8\|D7SNS8_VITVI	7.042e-21	55.06	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7KE85\|D7KE85_ARALY	2.958e-19	54.81	Ubiquitin-specific protease 2 OS=Arabidopsis lyrat...	[more]
D7LFL0\|D7LFL0_ARALY	1.422e-13	42.72	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
Q0J0M6\|Q0J0M6_ORYSJ	6.606e-11	42.57	Ubiquitin carboxyl-terminal hydrolase OS=Oryza sat...	[more]
A2Z2V5\|A2Z2V5_ORYSI	1.472e-10	42.57	Ubiquitin carboxyl-terminal hydrolase OS=Oryza sat...	[more]
C5X4P2\|C5X4P2_SORBI	2.775e-9	33.66	Ubiquitin carboxyl-terminal hydrolase OS=Sorghum b...	[more]

BLAST of CV190392 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01021053001	3.585e-23	55.06	assembled CDS	[more]

BLAST of CV190392 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G04860.1	9.093e-20	51.92	\| Symbols: UBP2, ATUBP2 \| ubiquitin-specific prote...	[more]
AT2G32780.1	7.456e-14	42.31	\| Symbols: UBP1, ATUBP1 \| ubiquitin-specific prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10420	UBIQUITIN SPECIFIC PROTEASE FAMILY C19-RELATED	coord: 70..182 score: 4.6
None	No IPR available	PANTHER	PTHR10420:SF52	UBIQUITIN-SPECIFIC PROTEASE 16-RELATED	coord: 70..182 score: 4.6
None	No IPR available	SEG	seg	seg	coord: 105..119 score
None	No IPR available	SEG	seg	seg	coord: 29..41 score
None	No IPR available	SEG	seg	seg	coord: 11..25 score
None	No IPR available	SEG	seg	seg	coord: 6..18 score: NAcoord: 48..62 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV190392 ID=CV190392; Name=CV190392; organism=Vaccinium corymbosum; type=EST; length=620bp
CCACGAGGTGAGATTCGAGAGAAGGCGAGGTCTCCTCATCCTTTGTTGGC
TATGAACCAGATGCATGCTTTGATGGGTTTGGAGACTTATTTAACGAGCC
AGAAATTGTTGAAGGCCCCAATTTAAAACCCTTGTCAACTGATACTAACA
TTCAGGGTAATGAAATTGCTGAAACTGGTTTCTTAGTTGCAAATATCAGT
GAGTCTGATCCAGATGAAGTTGATAATAGTGACTCCCCGGTGTCCATAGA
GAGTTGTTTGGCGTTGTTTACTAAGCCAGAGCTTCTTTCCGATGAGCATG
CTTGGCATTGTGAGAATTGTTCGAAAGTCGTGCAAAAGCAAAGGATGCAA
TTAAGGAAAAGGCAGCAGAATGGGGTGTCAGAGATTCAGATGAGTGGAGT
CGACAACAGAATTCAAAGTGCTCCATCAAATTTGACAAATGATCGCCCTT
TCCCTAATGACCGAGATATCAGAGAAAATGTACTCACTACATTTGACGAA
AGCTTAGTGTCAGAAAATGGCAAAATTAATGATAACCAAAACGACAAGAA
GGAGATCAGTGAGGAAGCTGTGCTAATTTTAAGCAGTTTCCCAGTTTAAA
CAGAAGGAAGTGGTGACATG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K11844	USP16_45; ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.1.2.15]

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated