DW043023
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043023 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s05610.1 () HSP 1 Score: 59.3066 bits (142), Expect = 2.395e-9 Identity = 41/123 (33.33%), Postives = 54/123 (43.90%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRQTGESQRRGSVSFTGKKDNASDITNSAPKD 386 +VLTGQ PNGGPMMN+ SFGG QQ YPNN AMHT +AA +Q G+ + RGS++ + +KDN S+ +S+ KD Sbjct: 314 KVLTGQ-TPNGGPMMNYA-SFGGGQQLYPNNQAMHTFLAAQQFQQLQIHSQKQQQQQQQQQQFQLHQLQQQQLQQQQEQQQQ----------QQGGDLKMRGSLTSSSQKDNGSEANSSSSKD 424
BLAST of DW043023 vs. P. persica 1.0 peptide
Match: ppa005999m () HSP 1 Score: 65.0846 bits (157), Expect = 3.084e-11 Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLMAA 137 +VLTGQ +PNGGPMMNF SFG QQFYPNN AMHTL+ A Sbjct: 321 KVLTGQAMPNGGPMMNFA-SFGSGQQFYPNNQAMHTLLTA 359
BLAST of DW043023 vs. TrEMBL
Match: D7U1V4|D7U1V4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_102.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010836001 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.166e-9 Identity = 41/123 (33.33%), Postives = 54/123 (43.90%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRQTGESQRRGSVSFTGKKDNASDITNSAPKD 386 +VLTGQ +PNG PMMNFP S+G QFYPNN AMHTL+ A +Q G+ + RGS++ +K+NASD +SA K+ Sbjct: 239 KVLTGQTMPNGAPMMNFPQSYGTGAQFYPNNQAMHTLLTAQQFQQLQIHSHKQHQLQQHQLHQLQQQQQQIQQQIQQQQMQQEQP-------QQAGDLKIRGSMASPSQKENASDTNSSAVKE 354
BLAST of DW043023 vs. TrEMBL
Match: B9SU10|B9SU10_RICCO (Transcription factor RF2a, putative OS=Ricinus communis GN=RCOM_0454610 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 7.798e-8 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLM 131 +VLTGQ + NGGPMMN+ SFG QQFYPNNHAMHTL+ Sbjct: 313 KVLTGQAMANGGPMMNYN-SFGTGQQFYPNNHAMHTLL 349
BLAST of DW043023 vs. TrEMBL
Match: B9MY63|B9MY63_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_920650 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.963e-7 Identity = 41/123 (33.33%), Postives = 54/123 (43.90%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRQTGESQRRGSVSFTGKKDNASDITNSAPKD 386 +VLTGQ PNGGPMMN+ SFGG QQ YPNN AMHT +AA +Q G+ + RGS++ + +KDN S+ +S+ KD Sbjct: 253 KVLTGQ-TPNGGPMMNYA-SFGGGQQLYPNNQAMHTFLAAQQFQQLQIHSQKQQQQQQQQQQFQLHQLQQQQLQQQQEQQQQ----------QQGGDLKMRGSLTSSSQKDNGSEANSSSSKD 363
BLAST of DW043023 vs. Vitis vinifera peptide
Match: GSVIVT01010836001 (assembled CDS) HSP 1 Score: 65.855 bits (159), Expect = 1.545e-11 Identity = 41/123 (33.33%), Postives = 54/123 (43.90%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRQTGESQRRGSVSFTGKKDNASDITNSAPKD 386 +VLTGQ +PNG PMMNFP S+G QFYPNN AMHTL+ A +Q G+ + RGS++ +K+NASD +SA K+ Sbjct: 239 KVLTGQTMPNGAPMMNFPQSYGTGAQFYPNNQAMHTLLTAQQFQQLQIHSHKQHQLQQHQLHQLQQQQQQIQQQIQQQQMQQEQP-------QQAGDLKIRGSMASPSQKENASDTNSSAVKE 354
BLAST of DW043023 vs. TAIR peptide
Match: AT1G06070.1 (| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr1:1835201-1837116 REVERSE LENGTH=423) HSP 1 Score: 53.1434 bits (126), Expect = 1.511e-7 Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 18 QVLTGQGIPNGGPMMNFPPSFGGNQQFYPNNHAMHTLMAA 137 +VLTGQG P+ G MN+ SFG NQQFYPNN +MHT++AA Sbjct: 302 KVLTGQG-PSNGTSMNYG-SFGSNQQFYPNNQSMHTILAA 339 The following BLAST results are available for this feature:
BLAST of DW043023 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of DW043023 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043023 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 3
BLAST of DW043023 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of DW043023 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043023 ID=DW043023; Name=DW043023; organism=Vaccinium corymbosum; type=EST; length=658bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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