DW043144

EST Overview
NameDW043144
Unique NameDW043144
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length507
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043144 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.414e-11
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  130 MAASSVMLSILVSPATGVAKPARVVGLKPTTP-CCYMPXXXXXXXXXVRCMAKDGWKKEVETPVTLSQKAEVSHPIFFDVFRI*AGPAPGETLIGKLRHEPALVGTIS 450
            MA SSVM SILVSP TGVAK A   GL  T P  CY+P         VRCMAKDG K+EVE+P+  +  A+V    FFD+    +GP P E + G+L    A+VG ++
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIE-ANVAKVKTD-FFDLLAF-SGPGP-ERINGRL----AMVGFVA 97          
BLAST of DW043144 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.099e-10
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  130 MAASSVMLSILVSPATGVAKPARVVGLKPTTP-CCYMPXXXXXXXXXVRCMAKDGWKKEVETPVTLSQKAEVSHPIFFDVFRI*AGPAPGETLIGKLRHEPALVGTIS 450
            MA SSVM SILVSP TGVAK A   GL  T P  CY+P         VRCMAKDG K+EVE+P+  +  A+V    FFD+    +GP P E + G+L    A+VG ++
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIE-ANVAKV-RTDFFDLLAF-SGPGP-ERINGRL----AMVGFVA 97          
BLAST of DW043144 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.197e-10
Identity = 52/109 (47.71%), Postives = 64/109 (58.72%), Query Frame = 1
Query:  130 MAASSVMLSILVSPATGVAKPARVVGLKPTTP-CCYMPXXXXXXXXXVRCMAKDGWKKEVETPVTLS-QKAEVSHPIFFDVFRI*AGPAPGETLIGKLRHEPALVGTIS 450
            MA SSVM SILVSP TGVAK A   GL  T P   Y+P         VRCMAKDG K+EVE+PV  +  KA +    FFD+    +GP P E + G+L    A+VG ++
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESPVKATVAKARID---FFDLLAF-SGPGP-ERINGRL----AMVGFVA 97          
BLAST of DW043144 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.343e-8
Identity = 48/109 (44.04%), Postives = 60/109 (55.05%), Query Frame = 1
Query:  130 MAASSVMLSILVSPATGVAKPARVVGLKPTTP--CCYMPXXXXXXXXXVRCMAKDGWKKEVETPVTLSQKAEVSHPIFFDVFRI*AGPAPGETLIGKLRHEPALVGTIS 450
            MA SSVM SI+VSP TGVAK     GL  T P  CCY+P         VRCMAK G K+E  +P     KA+V     FD+     GPAP E + G+L    A++G ++
Sbjct:    1 MATSSVMQSIMVSPVTGVAKGT---GLSRTIPRSCCYLPRQGRNSGMLVRCMAKGGQKEEAGSP----PKAKV----LFDLLAF-KGPAP-ERINGRL----AMIGFVA 92          
BLAST of DW043144 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.309e-7
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query:  130 MAASSVMLSILVSPATGVAKPARVVGLKPTT---PCCYMPXXXXXXXXXVRCMAKDGWKKEVETPVTLSQKAEVSHPIFFDVFRI*AGPAPGETLIGKLRHEPALVGTIS 450
            MA SSVM SI+VSPATGVA   +  GL  +T     CY+P         VRCMAK G K+EV T    S KA+V    FF++    +GP P E + G+L    A+VG ++
Sbjct:    1 MATSSVMQSIMVSPATGVA--TKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEVGT----SPKAKV-RTDFFNLLAF-SGPGP-ERINGRL----AMVGFVA 97          
The following BLAST results are available for this feature:
BLAST of DW043144 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
B2BJD1|B2BJD1_RHOCT8.414e-1148.15Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD0|B2BJD0_RHOCT1.099e-1048.15Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT3.197e-1047.71Early light-induced protein 3 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT1.343e-844.04Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT3.309e-743.64Early light-induced protein 6 OS=Rhododendron cata... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 54..62
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043144 ID=DW043144; Name=DW043144; organism=Vaccinium corymbosum; type=EST; length=507bp
ATCGAGCGGCCGCCCGGGCAGGTACGCGGGGACAACTCAAACTAATAACT
AACAGCCCTGAAGTATAAAGTATCTACATAGCCAATACACTCGAACCCTG
TAACTCAACCCCTAAGCTTATACTCTCCAATGGCCGCCTCATCAGTAATG
CTGTCCATTCTAGTGAGCCCGGCGACAGGTGTCGCCAAGCCGGCGCGCGT
GGTGGGATTGAAACCGACGACTCCTTGCTGCTATATGCCACGTCAGCAGA
GGAGCTCTAGCCGGCAAGTGCGGTGCATGGCCAAGGATGGTTGGAAGAAG
GAAGTAGAAACTCCCGTCACGTTGTCCCAAAAGGCCGAGGTCAGCCACCC
GATTTTCTTCGACGTGTTCCGCATTTAAGCCGGGCCAGCACCCGGNGAGA
CTCTTATTGGCAAACTCCGCCATGAACCGGCTTTGGTGGGCACCATTAGC
CTGGGAAACTATTACCATGGGCCAGAATGTGTTTAACTCCGGATATTCCA
CGGTGGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated