DW043166

EST Overview
NameDW043166
Unique NameDW043166
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length582
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
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BLAST of DW043166 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15770.1 ()

HSP 1 Score: 44.2838 bits (103), Expect = 1.399e-7
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 3 
Query:  333 KPPVTLSPQG*GTAPISFQVFAFSGPSPERINGRLAMIRFVGS 461
            +P  T  P+    +P    +FAFSGP+PERINGRLAMI FV +
Sbjct:   60 EPSSTPKPK---VSPKFLDLFAFSGPAPERINGRLAMIGFVAA 99

HSP 2 Score: 28.4906 bits (62), Expect = 1.399e-7
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  485 GQDVFTQISHRGIPWF 532
            GQD+F+QIS+ G+ WF
Sbjct:  107 GQDLFSQISNGGVSWF 122
[Close]
BLAST of DW043166 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15780.1 ()

HSP 1 Score: 41.5874 bits (96), Expect = 8.550e-7
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 3 
Query:  390 VFAFSGPSPERINGRLAMIRFVGS 461
            V AFSGP+PERINGRLAMI FV +
Sbjct:   76 VLAFSGPAPERINGRLAMIGFVAA 99

HSP 2 Score: 28.4906 bits (62), Expect = 8.550e-7
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  485 GQDVFTQISHRGIPWF 532
            GQD+F+QIS+ G+ WF
Sbjct:  107 GQDLFSQISNGGVSWF 122
[Close]
BLAST of DW043166 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15800.1 ()

HSP 1 Score: 41.5874 bits (96), Expect = 8.550e-7
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 3 
Query:  390 VFAFSGPSPERINGRLAMIRFVGS 461
            V AFSGP+PERINGRLAMI FV +
Sbjct:   76 VLAFSGPAPERINGRLAMIGFVAA 99

HSP 2 Score: 28.4906 bits (62), Expect = 8.550e-7
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 2 
Query:  485 GQDVFTQISHRGIPWF 532
            GQD+F+QIS+ G+ WF
Sbjct:  107 GQDLFSQISNGGVSWF 122
[Close]
BLAST of DW043166 vs. P. persica 1.0 peptide
Match: ppa026587m ()

HSP 1 Score: 45.8246 bits (107), Expect = 6.118e-7
Identity = 29/68 (42.65%), Postives = 37/68 (54.41%), Query Frame = 3 
Query:  261 PRQQRTL*PASAVHGPSMDRRRK*KPPVTLSPQG*GTAPISFQ-VFAFSGPSPERINGRLAMIRFVGS 461
            P + R++        PS        PP  L+P     A I F  +FAFSGP+PERINGRLAM+ FV +
Sbjct:   40 PMRVRSMAKDGQKEQPSTVTNASKSPPPPLTPLP-SKASIKFSDLFAFSGPAPERINGRLAMVGFVSA 106

HSP 2 Score: 24.2534 bits (51), Expect = 6.118e-7
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2 
Query:  485 GQDVFTQISHRGIPWF 532
            GQDVF QIS+ G+  F
Sbjct:  114 GQDVFAQISNGGVSLF 129
[Close]
BLAST of DW043166 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 2.014e-7
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 3 
Query:  384 FQVFAFSGPSPERINGRLAMIRFVGS 461
            F VFAFSGP+PERINGRLAMI FV +
Sbjct:   85 FDVFAFSGPAPERINGRLAMIGFVAA 110

HSP 2 Score: 33.113 bits (74), Expect = 2.014e-7
Identity = 16/30 (53.33%), Postives = 20/30 (66.67%), Query Frame = 2 
Query:  485 GQDVFTQISHRGIPWFCRLRGAIR-NSLIP 571
            G+DVF QI++ GIPWF    G +   SLIP
Sbjct:  118 GEDVFAQIANGGIPWFVLTTGVLSVASLIP 147
The following BLAST results are available for this feature:
BLAST of DW043166 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
POPTR_0008s15770.11.399e-753.49[more]
POPTR_0008s15780.18.550e-779.17[more]
POPTR_0008s15800.18.550e-779.17[more]
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BLAST of DW043166 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa026587m6.118e-742.65[more]
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BLAST of DW043166 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
B2BJD6|B2BJD6_RHOCT2.014e-780.77Early light-induced protein 7 OS=Rhododendron cata... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 6..30
score: 2.1
NoneNo IPR availablePANTHERPTHR14154:SF1EARLY LIGHT-INDUCED PROTEINcoord: 6..30
score: 2.1

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043166 ID=DW043166; Name=DW043166; organism=Vaccinium corymbosum; type=EST; length=582bp
TAAACACCTTAGCTATCGCGGCCGCGAATACGCCCTTTCGACGCTGCCGC
CCGGGCAGGTACGCGGGGACACTCAAAAACTTATTACTTACAGCCATAGC
CATTACATCTCGAACCCTGTAACTCAATCCCTACGACTTATACCCTCCAA
TGGCAGCCTCGTCAGTAATGCACGTCATTTCTAGTGACGCGCGGCGACAG
GTGTCGCCAAGCCGGCGCGCGCGGTGGGATTGAACACCGATGACTCCTTG
CTGGTATATGCCCCGTCAGCAGAGGACGCTCTAGCCGGCTAGTGCGGTGC
ATGGGCCAAGTATGGACAGAAGAAGGAAGTAGAAACCTCCCGTCACGTTG
TCCCCCCAAGGATAAGGGACAGCACCGATTTCCTTCCAAGTGTTCGCATT
TAGTGGGCCCTCACCGGAGAGAATCAACGGCAGACTTGCCATGATCCGCT
TCGTGGGCAGCCATAGCCGTGGAACTATACCATGGGTCAAGATGTGTTTA
CTCAGATATCCCACCGTGGGATCCCGTGGTTTTGCCGACTTCGGGGTGCC
ATTCGTAACTCTTTGATCCCCCCCTCCCGTGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated