DW043180 | GDV

EST Overview


Name	DW043180
Unique Name	DW043180
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	621

Libraries


Library Name	Type
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosum	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10

Homology

[Close]

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s12750.1 ()

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-28
Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQL------GEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQE-RISFGSLELRTIQKIALAPA 369
            YLKSMEASF+N LYNS D LGWRSQ+        GE + +TC  SGQ+KVLR G W+K+NF   + Q +        L +PWIQ F  A + +   S  LQE  I    + L+  + +   PA
Sbjct:   53 YLKSMEASFVNQLYNSIDLLGWRSQKGRPVPNLSGEVNCSTCRPSGQFKVLRRGGWQKINFRRHESQLSSAKDSRGYLTSPWIQQFTPARKPEGATSPALQECAIQSRGINLKWKKAVLCCPA 175

HSP 2 Score: 47.3654 bits (111), Expect = 3.052e-28
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 2

Query:  404 CRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            C  D V ++TE++ QNF+DED E E+A+    ++  K L   PSS+DQVV
Sbjct:  189 CHRDFVESNTEMSGQNFVDEDIESESASSSFSSKRLKTLKTDPSSSDQVV 238

[Close]

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s02900.1 ()

HSP 1 Score: 92.0485 bits (227), Expect = 4.568e-26
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLG------EKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQE 309
            YLKSMEASF+N L+NS D LGWRS ++        E +  TC  SG++KV R G W+K+NF   + Q +        L +PWIQHF SA + ++V S  LQE
Sbjct:   49 YLKSMEASFVNQLHNSMDLLGWRSLKEGSVPNLSREVNCRTCTPSGEFKVHRRGNWQKINFRRPESQISSAKESRGFLTSPWIQHFTSARKPEDVASPTLQE 150

HSP 2 Score: 43.5134 bits (101), Expect = 4.568e-26
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 2

Query:  413 DSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            D V ++TE++DQNF+DED +GE A+    ++  K L    S +DQVV
Sbjct:  188 DLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVV 234

[Close]

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s02900.2 ()

HSP 1 Score: 92.0485 bits (227), Expect = 3.031e-19
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLG------EKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQE 309
            YLKSMEASF+N L+NS D LGWRS ++        E +  TC  SG++KV R G W+K+NF   + Q +        L +PWIQHF SA + ++V S  LQE
Sbjct:   49 YLKSMEASFVNQLHNSMDLLGWRSLKEGSVPNLSREVNCRTCTPSGEFKVHRRGNWQKINFRRPESQISSAKESRGFLTSPWIQHFTSARKPEDVASPTLQE 150

[Close]

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s10420.1 ()

HSP 1 Score: 49.6766 bits (117), Expect = 2.675e-13
Identity = 36/98 (36.73%), Postives = 47/98 (47.96%), Query Frame = 1

Query:   16 GRYLKSMEASFIND-LYNSADTLGWRSQRQLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQ 306
            G YL S+EASF+N+ L++S    GW     LGE     C S  Q+ VLRD  W+K   E   + T   +   V    P + H  SA  + N    DLQ
Sbjct:   53 GLYLASLEASFVNNQLHHSIRLRGW-----LGEMGGRPCSSPHQFMVLRDSIWQKKRNEPLLEST--ADSHFVKDITPAMCHLASAGNQCNAAHHDLQ 143

HSP 2 Score: 42.743 bits (99), Expect = 2.675e-13
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            LC  + +G+  EV+DQNF++ED EGE  N V   +  +   A  SSNDQ V
Sbjct:  177 LCYQNYIGSTIEVSDQNFVEED-EGEMLNCVHMVKRLRTSGAEASSNDQAV 226

[Close]

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s10420.2 ()

HSP 1 Score: 49.6766 bits (117), Expect = 7.619e-13
Identity = 36/98 (36.73%), Postives = 47/98 (47.96%), Query Frame = 1

Query:   16 GRYLKSMEASFIND-LYNSADTLGWRSQRQLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQ 306
            G YL S+EASF+N+ L++S    GW     LGE     C S  Q+ VLRD  W+K   E   + T   +   V    P + H  SA  + N    DLQ
Sbjct:   53 GLYLASLEASFVNNQLHHSIRLRGW-----LGEMGGRPCSSPHQFMVLRDSIWQKKRNEPLLEST--ADSHFVKDITPAMCHLASAGNQCNAAHHDLQ 143

HSP 2 Score: 41.2022 bits (95), Expect = 7.619e-13
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQ 547
            LC  + +G+  EV+DQNF++ED EGE  N V   +  +   A  SSNDQ
Sbjct:  177 LCYQNYIGSTIEVSDQNFVEED-EGEMLNCVHMVKRLRTSGAEASSNDQ 224

[Close]

BLAST of DW043180 vs. P. persica 1.0 peptide
Match: ppa010429m ()

HSP 1 Score: 105.916 bits (263), Expect = 4.709e-32
Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQR-------QLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGP-HVLLANPWIQHFRSACREQNVLSCDLQERISFGSLELRTIQKIALAPADLTC 381
            YLKSMEASF+N LY+S D+ GW SQ+        L +   N+   SGQ+KVLR GCW+K+NF   + + NK +G    LL NPW+ HFRS+C+ + V S  +QE ++  S E+ +I K  +  A  TC
Sbjct:   54 YLKSMEASFVNQLYSSMDSRGWHSQKGSFLHPKSLRQPQFNSRAPSGQFKVLRGGCWQKINFVRAEAELNKADGSCGDLLENPWVLHFRSSCKTKEVESPIVQEAVASVSEEVDSIGKKEMPCAPATC 181

HSP 2 Score: 49.2914 bits (116), Expect = 4.709e-32
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            LC  D VG +TEV+DQNF+DED + E       A+  K L+   ++NDQVV
Sbjct:  192 LCHQDMVGGNTEVSDQNFVDEDIKEEKTLGSCDAKRMKALILDVANNDQVV 242

[Close]

BLAST of DW043180 vs. P. persica 1.0 peptide
Match: ppa012041m ()

HSP 1 Score: 98.9821 bits (245), Expect = 1.776e-21
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQR-------QLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGP-HVLLANPWIQHFRSACREQNVLSCDLQERIS 318
            YLKSMEASF+N LY+S D+ GW SQ+        L +   N+   SGQ+KVLR GCW+K+NF   + + NK +G    LL NPW+ HFRS+C+ + V S  +QE ++
Sbjct:   54 YLKSMEASFVNQLYSSMDSRGWHSQKGSFLHPKSLRQPQFNSRAPSGQFKVLRGGCWQKINFVRAEAELNKADGSCGDLLENPWVLHFRSSCKTKEVESPIVQEAVA 160

[Close]

BLAST of DW043180 vs. P. persica 1.0 peptide
Match: ppa017905m ()

HSP 1 Score: 52.7582 bits (125), Expect = 1.460e-7
Identity = 32/97 (32.99%), Postives = 45/97 (46.39%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQ------RQLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLS 294
            YL S+E SF+N+LY+S     W  Q      R L E    T  SS Q+ V++DGC +K+N    +         HV + +P   H   A +   V S
Sbjct:   13 YLDSLETSFVNELYHSMRLRDWHQQKNARGTRSLQEVSFKTQNSSDQFMVVQDGCLQKINLRRNESLMESTANSHVTMRSPCRCHSTLAGKSCTVSS 109

[Close]

BLAST of DW043180 vs. TrEMBL
Match: A5CB41|A5CB41_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040890 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.077e-30
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKHS-------NTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVL 291
            YLKSMEASF++ LYNS   LGW SQ++              T  SSGQ+KVLR G W+K+NFE  ++Q  K +G HVLLANPWIQHFRSACR++ V+
Sbjct:   49 YLKSMEASFVDQLYNSXGLLGWHSQKENPSDSKPSLQMLCKTRNSSGQFKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQHFRSACRDETVV 145

HSP 2 Score: 45.4394 bits (106), Expect = 6.077e-30
Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 2

Query:  383 PMNPFPLCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQ 547
            PM    L + DS+  +TEV+DQNF+D+D EG   N +  A+  K +V     NDQ
Sbjct:  180 PMYHCHLRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQ 234

[Close]

BLAST of DW043180 vs. TrEMBL
Match: B9GNV9|B9GNV9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816477 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.719e-26
Identity = 53/123 (43.09%), Postives = 69/123 (56.10%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQL------GEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQE-RISFGSLELRTIQKIALAPA 369
            YLKSMEASF+N LYNS D LGWRSQ+        GE + +TC  SGQ+KVLR G W+K+NF   + Q +        L +PWIQ F  A + +   S  LQE  I    + L+  + +   PA
Sbjct:   52 YLKSMEASFVNQLYNSIDLLGWRSQKGRPVPNLSGEVNCSTCRPSGQFKVLRRGGWQKINFRRHESQLSSAKDSRGYLTSPWIQQFTPARKPEGATSPALQECAIQSRGINLKWKKAVLCCPA 174

HSP 2 Score: 47.3654 bits (111), Expect = 3.719e-26
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 2

Query:  404 CRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            C  D V ++TE++ QNF+DED E E+A+    ++  K L   PSS+DQVV
Sbjct:  188 CHRDFVESNTEMSGQNFVDEDIESESASSSFSSKRLKTLKTDPSSSDQVV 237

[Close]

BLAST of DW043180 vs. TrEMBL
Match: B9R7B9|B9R7B9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1590290 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.527e-24
Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEK------HSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQERISFGSLELRTIQKIALAPADLTC 381
            YLKSMEASF+  LYNS D L  + ++++ +       HSN    SGQ+K+LR GCWEK+NF+    Q N  N P  +L +PWI+HFRSA + Q++    +QERI+  +  + +  K  ++    TC
Sbjct:   44 YLKSMEASFVKQLYNSMDDLDLQLKKEMSDPNLSKQVHSNKSTPSGQFKILRGGCWEKINFQRPASQVNIANEPSGVLISPWIRHFRSARKPQDI----VQERIALQNQAINSSGKKVVSGCTATC 165

HSP 2 Score: 35.039 bits (79), Expect = 2.527e-24
Identity = 18/53 (33.96%), Postives = 28/53 (52.83%), Query Frame = 2

Query:  395 FPLCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            F  CR+  V ++TEV+DQNF+DE+           ++  K      + NDQ+V
Sbjct:  174 FYSCRNGPVDSNTEVSDQNFVDENIRSGKKTSACSSERMKKPKTGAAINDQMV 226

[Close]

BLAST of DW043180 vs. TrEMBL
Match: B9MVQ9|B9MVQ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591950 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.568e-24
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLG------EKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQE 309
            YLKSMEASF+N L+NS D LGWRS ++        E +  TC  SG++KV R G W+K+NF   + Q +        L +PWIQHF SA + ++V S  LQE
Sbjct:   49 YLKSMEASFVNQLHNSMDLLGWRSLKEGSVPNLSREVNCRTCTPSGEFKVHRRGNWQKINFRRPESQISSAKESRGFLTSPWIQHFTSARKPEDVASPTLQE 150

HSP 2 Score: 43.5134 bits (101), Expect = 5.568e-24
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 2

Query:  413 DSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            D V ++TE++DQNF+DED +GE A+    ++  K L    S +DQVV
Sbjct:  188 DLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVV 234

[Close]

BLAST of DW043180 vs. TrEMBL
Match: C6TL37|C6TL37_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.505e-20
Identity = 41/99 (41.41%), Postives = 65/99 (65.66%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQERIS 318
            Y+KS+EASF+N LY+S         +Q+   + +   +SGQ+KVLR GCW+K+NFE    +T++ N  H L  NPWIQH+RS+ +++++    LQE ++
Sbjct:   41 YIKSIEASFVNQLYDS---------KQMKTSY-DPATTSGQFKVLRGGCWQKINFERVNPRTSRINQCHDLTENPWIQHYRSSSKQRSIAVSSLQESVT 129

HSP 2 Score: 37.7354 bits (86), Expect = 1.505e-20
Identity = 14/42 (33.33%), Postives = 28/42 (66.67%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVA 526
            +C  D + +DTE++DQNF+DE+ +G+  N   + +  + L++
Sbjct:  157 VCHKDMLYSDTEMSDQNFVDEEVKGKKQNKKSKVKRQRSLIS 198

[Close]

BLAST of DW043180 vs. TrEMBL
Match: A5AWZ9|A5AWZ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001771 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.157e-17
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKHS------NTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQER 312
            YL S+E+SF+N L++S    G RS+ ++ E +S      N   SS +Y VL+DGCW K NF   +  ++       +L NPWI HF+SA ++ +V S DL  R
Sbjct:   67 YLDSLESSFVNQLHSSMGLFGRRSKVKMMELNSFQELAVNAYNSSDEYTVLQDGCWRKRNFGRHQLLSDAAAESRDILENPWICHFKSAGQQHDVTSSDLWNR 169

HSP 2 Score: 37.7354 bits (86), Expect = 5.157e-17
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 2

Query:  413 DSVGNDTEVTDQNFIDEDSEGENANHVPQAQ--TTKILVAPPSSNDQVV 553
            DSVG  TEV+DQNFIDED E + ++ V +A+   TK      ++ DQ V
Sbjct:  205 DSVGGITEVSDQNFIDEDQENK-SSRVSRAKKLKTKADTVDATNTDQCV 252

[Close]

BLAST of DW043180 vs. TrEMBL
Match: D7U5H1|D7U5H1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024176001 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.783e-17
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQR-------QLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPH-VLLANPWIQHFRSACREQNVLSCDLQERISFGSLELRTIQKIALA 363
            YL SMEASF+N LY+S++ LGW  ++          +K  NTCISSGQ+KVLR G W+K+      +    EN  H  L ++PWI+HFRS+ R Q+     LQE  +  S  ++   K A++
Sbjct:   76 YLNSMEASFVNQLYDSSNLLGWPPRKWNPSESQPSSQKDCNTCISSGQFKVLRGGSWQKM------ECVRAENKRHDDLQSDPWIRHFRSSRRGQDPGLPFLQENAASTSKAVKQKGKQAVS 191

HSP 2 Score: 30.8018 bits (68), Expect = 8.783e-17
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEG 475
            L   DSVG++ EV+ QNF+D++ EG
Sbjct:  207 LYHRDSVGSNIEVSGQNFMDDEIEG 231

[Close]

BLAST of DW043180 vs. TrEMBL
Match: B9HS12|B9HS12_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821232 PE=4 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 9.337e-11
Identity = 36/98 (36.73%), Postives = 47/98 (47.96%), Query Frame = 1

Query:   16 GRYLKSMEASFIND-LYNSADTLGWRSQRQLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQ 306
            G YL S+EASF+N+ L++S    GW     LGE     C S  Q+ VLRD  W+K   E   + T   +   V    P + H  SA  + N    DLQ
Sbjct:   53 GLYLASLEASFVNNQLHHSIRLRGW-----LGEMGGRPCSSPHQFMVLRDSIWQKKRNEPLLEST--ADSHFVKDITPAMCHLASAGNQCNAAHHDLQ 143

HSP 2 Score: 41.2022 bits (95), Expect = 9.337e-11
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQ 547
            LC  + +G+  EV+DQNF++ED EGE  N V   +  +   A  SSNDQ
Sbjct:  177 LCYQNYIGSTIEVSDQNFVEED-EGEMLNCVHMVKRLRTSGAEASSNDQ 224

[Close]

BLAST of DW043180 vs. TrEMBL
Match: D7MQT1|D7MQT1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_356828 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.153e-9
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKH-SNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENG-PHVLLANPWIQHFRSACREQ 282
            YLKSMEASF++ LYNS   LG         +  S    S  Q+KVL DG W+K+N +  + + N  +G  H  L +PWI+H++   + Q
Sbjct:   64 YLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGSSHEFLRSPWIKHYKPLVKTQ 152

[Close]

BLAST of DW043180 vs. TrEMBL
Match: Q9FMM9|Q9FMM9_ARATH (Genomic DNA, chromosome 5, P1 clone:MBD2 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.812e-9
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKH-SNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENG--PHVLLANPWIQHFRSACREQ 282
            YLKSMEASF++ LYNS   LG         +  S    S  Q+KVL DG W+K+N +  + + N  +G   H  L +PWI+H++   + Q
Sbjct:   56 YLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQ 145

[Close]

BLAST of DW043180 vs. Vitis vinifera peptide
Match: GSVIVT01009490001 (assembled CDS)

HSP 1 Score: 110.153 bits (274), Expect = 3.739e-33
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKHS-------NTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVL 291
            YLKSMEASF++ LYNS   LGW SQ++              T  SSGQ+KVLR G W+K+NFE  ++Q  K +G HVLLANPWIQHFRSACR++ V+
Sbjct:   49 YLKSMEASFVDQLYNSLGLLGWHSQKENPSDSKPSLQMLCKTRNSSGQFKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQHFRSACRDETVV 145

HSP 2 Score: 48.521 bits (114), Expect = 3.739e-33
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 2

Query:  383 PMNPFPLCRSDSVGNDTEVTDQNFIDEDSEGENANHVPQAQTTKILVAPPSSNDQVV 553
            PM    L + DS+  +TEV+DQNF+D+D EG   N +  A+  K +V     NDQVV
Sbjct:  180 PMYHCHLRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQVV 236

[Close]

BLAST of DW043180 vs. Vitis vinifera peptide
Match: GSVIVT01031734001 (assembled CDS)

HSP 1 Score: 74.3294 bits (181), Expect = 2.587e-19
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKHS------NTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPHVLLANPWIQHFRSACREQNVLSCDLQER 312
            YL S+E+SF+N L++S    G RS+ ++ E +S      N   SS +Y VL+DGCW K NF   +  ++       +L NPWI HF+SA ++ +V S DL  R
Sbjct:   67 YLDSLESSFVNQLHSSMGLFGRRSKVKMMELNSFQELAVNAYNSSDEYTVLQDGCWRKRNFGRHQLLSDAAAESRDILENPWICHFKSAGQQHDVTSSDLWNR 169

HSP 2 Score: 37.7354 bits (86), Expect = 2.587e-19
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 2

Query:  413 DSVGNDTEVTDQNFIDEDSEGENANHVPQAQ--TTKILVAPPSSNDQVV 553
            DSVG  TEV+DQNFIDED E + ++ V +A+   TK      ++ DQ V
Sbjct:  205 DSVGGITEVSDQNFIDEDQENK-SSRVSRAKKLKTKADTVDATNTDQCV 252

[Close]

BLAST of DW043180 vs. Vitis vinifera peptide
Match: GSVIVT01024176001 (assembled CDS)

HSP 1 Score: 80.4925 bits (197), Expect = 4.399e-19
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQR-------QLGEKHSNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENGPH-VLLANPWIQHFRSACREQNVLSCDLQERISFGSLELRTIQKIALA 363
            YL SMEASF+N LY+S++ LGW  ++          +K  NTCISSGQ+KVLR G W+K+      +    EN  H  L ++PWI+HFRS+ R Q+     LQE  +  S  ++   K A++
Sbjct:   76 YLNSMEASFVNQLYDSSNLLGWPPRKWNPSESQPSSQKDCNTCISSGQFKVLRGGSWQKM------ECVRAENKRHDDLQSDPWIRHFRSSRRGQDPGLPFLQENAASTSKAVKQKGKQAVS 191

HSP 2 Score: 30.8018 bits (68), Expect = 4.399e-19
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 2

Query:  401 LCRSDSVGNDTEVTDQNFIDEDSEG 475
            L   DSVG++ EV+ QNF+D++ EG
Sbjct:  207 LYHRDSVGSNIEVSGQNFMDDEIEG 231

[Close]

BLAST of DW043180 vs. TAIR peptide
Match: AT5G42900.3 (| Symbols: | cold regulated gene 27 | chr5:17198366-17199712 REVERSE LENGTH=245)

HSP 1 Score: 65.855 bits (159), Expect = 2.049e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKH-SNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENG--PHVLLANPWIQHFRSACREQ 282
            YLKSMEASF++ LYNS   LG         +  S    S  Q+KVL DG W+K+N +  + + N  +G   H  L +PWI+H++   + Q
Sbjct:   56 YLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQ 145

[Close]

BLAST of DW043180 vs. TAIR peptide
Match: AT5G42900.2 (| Symbols: | cold regulated gene 27 | chr5:17198366-17199712 REVERSE LENGTH=246)

HSP 1 Score: 65.855 bits (159), Expect = 2.049e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKH-SNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENG--PHVLLANPWIQHFRSACREQ 282
            YLKSMEASF++ LYNS   LG         +  S    S  Q+KVL DG W+K+N +  + + N  +G   H  L +PWI+H++   + Q
Sbjct:   56 YLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQ 145

[Close]

BLAST of DW043180 vs. TAIR peptide
Match: AT5G42900.1 (| Symbols: COR27 | cold regulated gene 27 | chr5:17198366-17199712 REVERSE LENGTH=246)

HSP 1 Score: 65.855 bits (159), Expect = 2.049e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1

Query:   22 YLKSMEASFINDLYNSADTLGWRSQRQLGEKH-SNTCISSGQYKVLRDGCWEKVNFESQKQQTNKENG--PHVLLANPWIQHFRSACREQ 282
            YLKSMEASF++ LYNS   LG         +  S    S  Q+KVL DG W+K+N +  + + N  +G   H  L +PWI+H++   + Q
Sbjct:   56 YLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQ 145

The following BLAST results are available for this feature:

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
BLAST of DW043180 vs. P. persica 1.0 peptide
BLAST of DW043180 vs. TrEMBL
BLAST of DW043180 vs. Vitis vinifera peptide
BLAST of DW043180 vs. TAIR peptide

BLAST of DW043180 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5


Match Name	E-value	Identity
POPTR_0002s12750.1	3.052e-28	43.09	[more]
POPTR_0014s02900.1	4.568e-26	46.08	[more]
POPTR_0014s02900.2	3.031e-19	46.08	[more]
POPTR_0009s10420.1	2.675e-13	36.73	[more]
POPTR_0009s10420.2	7.619e-13	36.73	[more]

BLAST of DW043180 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa010429m	4.709e-32	44.53	[more]
ppa012041m	1.776e-21	46.73	[more]
ppa017905m	1.460e-7	32.99	[more]

BLAST of DW043180 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A5CB41\|A5CB41_VITVI	6.077e-30	55.67	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GNV9\|B9GNV9_POPTR	3.719e-26	43.09	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9R7B9\|B9R7B9_RICCO	2.527e-24	41.27	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9MVQ9\|B9MVQ9_POPTR	5.568e-24	46.08	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6TL37\|C6TL37_SOYBN	1.505e-20	41.41	Putative uncharacterized protein OS=Glycine max PE...	[more]
A5AWZ9\|A5AWZ9_VITVI	5.157e-17	39.81	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7U5H1\|D7U5H1_VITVI	8.783e-17	40.98	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HS12\|B9HS12_POPTR	9.337e-11	36.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7MQT1\|D7MQT1_ARALY	2.153e-9	39.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9FMM9\|Q9FMM9_ARATH	2.812e-9	38.89	Genomic DNA, chromosome 5, P1 clone:MBD2 OS=Arabid...	[more]

BLAST of DW043180 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01009490001	3.739e-33	55.67	assembled CDS	[more]
GSVIVT01031734001	2.587e-19	39.81	assembled CDS	[more]
GSVIVT01024176001	4.399e-19	40.98	assembled CDS	[more]

BLAST of DW043180 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G42900.3	2.049e-11	38.89	\| Symbols: \| cold regulated gene 27 \| chr5:171983...	[more]
AT5G42900.2	2.049e-11	38.89	\| Symbols: \| cold regulated gene 27 \| chr5:171983...	[more]
AT5G42900.1	2.049e-11	38.89	\| Symbols: COR27 \| cold regulated gene 27 \| chr5:1...	[more]

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DW043180 ID=DW043180; Name=DW043180; organism=Vaccinium corymbosum; type=EST; length=621bp
TCGAGCTGCCGCCCGGGCAGGTACCTAAAGTCCATGGAAGCATCCTTCAT
TAATGATTTGTATAATTCCGCTGATACACTTGGATGGCGCTCTCAAAGAC
AGCTTGGGGAAAAGCATTCCAACACTTGTATCTCTTCTGGCCAGTATAAG
GTTCTTCGAGATGGCTGTTGGGAAAAGGTCAATTTTGAAAGTCAAAAACA
GCAAACGAACAAAGAAAATGGGCCTCATGTTCTTTTAGCAAATCCATGGA
TTCAACATTTCAGATCTGCATGCAGAGAACAGAATGTATTATCTTGTGAT
CTACAAGAAAGAATATCATTTGGGAGTCTGGAACTTCGAACCATTCAGAA
AATAGCATTGGCTCCTGCTGACTTAACCTGCCCCTATGAACCCGTTTCCT
TTGTGCCGCAGTGATTCAGTTGGAAACGATACAGAGGTCACAGACCAGAA
CTTTATCGATGAAGATAGTGAAGGTGAGAACGCCAACCATGTACCCCAAG
CCCAAACGACGAAAATTTTGGTTGCTCCCCCCTCAAGCAATGATCAAGTT
GTAACACCCCGCCCACCTCCTTAACCCCAATTGTTCCCCAGAATCCCTTC
TGTGTTCCGAAAAAAAAGAAG