DW043221

EST Overview
NameDW043221
Unique NameDW043221
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length590
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043221 vs. DB:swissprot:display
Match: LEAD3_DAUCA (Late embryogenesis abundant protein Dc3 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.707e-8
Identity = 43/112 (38.39%), Postives = 53/112 (47.32%), Query Frame = 1
Query:   10 AAEVRG-VKGQTTGSKDQTGSYTSXXXXXXXXXXXEVAQSTKGST----------------------IAGKDKTPGVIGNATEQVKCAAAGATETVKN--AAAGATEAVKNT 270
            A+E+ G  + +T  SKDQTGSY S           E AQ+ K  T                      +AGK+KT G++ +A EQVK  A GATE VKN    AGA E  K T
Sbjct:   40 ASEMAGSARDRTVESKDQTGSYVSDKAGAVKDKTCETAQAAKEKTGGAMQATKEKASEMGESAKETAVAGKEKTGGLMSSAAEQVKGMAQGATEAVKNTFGMAGADEEEKTT 151          
BLAST of DW043221 vs. TrEMBL
Match: Q5Q032|Q5Q032_CHOBU (Late embryogenesis-abundant protein OS=Chorispora bungeana PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.545e-8
Identity = 36/84 (42.86%), Postives = 44/84 (52.38%), Query Frame = 1
Query:   49 SKDQTGSYTSXXXXXXXXXXXEVAQSTKGSTIAGKDKTPGVIGNATEQVKCAAAGATETVKNAAAGATEAVKNTFGMGNKGGNK 300
            SKD+TGSY S           + A+ TK +  AGKDKT G++G   EQ           VK  A GAT+AVK T G+G   GNK
Sbjct:   76 SKDKTGSYMSETGETIKNKAQDTAEYTKETAEAGKDKTSGILGQTGEQ-----------VKQMAMGATDAVKQTLGLGTDEGNK 148          
BLAST of DW043221 vs. TrEMBL
Match: Q9FUG0|Q9FUG0_DAUCA (Lea1P OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.760e-7
Identity = 47/120 (39.17%), Postives = 55/120 (45.83%), Query Frame = 1
Query:   10 AAEVRGV-KGQTTGSKDQTGSYTSXXXXXXXXXXXEVAQSTKGST----------------------IAGKDKTPGVIGNATEQVKCAAAGATETVKNAAAGATEAVKNTFGMGNKGGNK 300
            A+E+ G  + +T  SKDQTGSY S           E  Q+ K  T                       AGK+KT GVI +A EQVK             A GATEAVKNTFGMG  GGN+
Sbjct:   40 ASELAGTARDRTAESKDQTGSYVSDKASAARDKSCETGQAAKEKTGGVVEATKEKASQMGESAKETAQAGKEKTGGVISSAAEQVK-----------GMAQGATEAVKNTFGMG--GGNE 146          
BLAST of DW043221 vs. TAIR peptide
Match: AT1G52690.2 (| Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr1:19619842-19620589 FORWARD LENGTH=169)

HSP 1 Score: 57.7658 bits (138), Expect = 5.093e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 1
Query:   49 SKDQTGSYTSXXXXXXXXXXXEVAQSTKGSTIAGKDKTPGVIGNATEQVKCAAAGATETVKNAAAGATEAVKNTFGMGNKGGNK 300
            SKD+TGSY S           + A+ TK +  AGK+KT G++G   EQ           VK  A GAT+AVK+T G+    GNK
Sbjct:   76 SKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQ-----------VKQMAMGATDAVKHTLGLRTDEGNK 148          
BLAST of DW043221 vs. TAIR peptide
Match: AT1G52690.1 (| Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr1:19619842-19620589 FORWARD LENGTH=169)

HSP 1 Score: 57.7658 bits (138), Expect = 5.093e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 1
Query:   49 SKDQTGSYTSXXXXXXXXXXXEVAQSTKGSTIAGKDKTPGVIGNATEQVKCAAAGATETVKNAAAGATEAVKNTFGMGNKGGNK 300
            SKD+TGSY S           + A+ TK +  AGK+KT G++G   EQ           VK  A GAT+AVK+T G+    GNK
Sbjct:   76 SKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQ-----------VKQMAMGATDAVKHTLGLRTDEGNK 148          
The following BLAST results are available for this feature:
BLAST of DW043221 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
LEAD3_DAUCA3.707e-838.39Late embryogenesis abundant protein Dc3 OS=Daucus ... [more]
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BLAST of DW043221 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
Q5Q032|Q5Q032_CHOBU3.545e-842.86Late embryogenesis-abundant protein OS=Chorispora ... [more]
Q9FUG0|Q9FUG0_DAUCA1.760e-739.17Lea1P OS=Daucus carota PE=2 SV=1[more]
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BLAST of DW043221 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G52690.25.093e-940.48| Symbols: | Late embryogenesis abundant protein ... [more]
AT1G52690.15.093e-940.48| Symbols: | Late embryogenesis abundant protein ... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..37
score
NoneNo IPR availableSEGsegsegcoord: 42..57
score
NoneNo IPR availableSEGsegsegcoord: 46..51
score: NAcoord: 82..95
score
NoneNo IPR availableSEGsegsegcoord: 21..35
score: NAcoord: 158..169
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043221 ID=DW043221; Name=DW043221; organism=Vaccinium corymbosum; type=EST; length=590bp
AGCGTGGTCGCGGCCGAGGTACGCGGGGTGAAAGGCCAGACCACCGGGTC
TAAGGACCAGACCGGAAGCTACACCTCCGACAAAGCCGGTGCGGCTAAGG
ACAAGGCGGGGGAGGTGGCCCAGTCGACCAAGGGCTCGACCATAGCCGGA
AAAGACAAGACCCCCGGCGTCATCGGTAACGCCACGGAGCAAGTCAAGTG
CGCCGCGGCGGGCGCCACGGAGACAGTCAAGAACGCCGCGGCGGGCGCGA
CCGAGGCCGTGAAAAATACCTTCGGCATGGGTAACAAGGGGGGCAACAAG
TAGATTTTTTGGAGTATTATTGTTGGTTGTTGGTACTTGTTTTCTATTAG
TTTGGGTCTTTGGTTTAGTATGGTACGCTGTTGGATGTCTTTTTTTCTTC
CTTTTTTTTCCCGAGTTGCCTTCATGTTTCCTGAGGCTAATTCCACCGTT
TTTGACCCCCTTGCCTTAATACTTAAGTACGTTGGGTTCGTTTTGGGTTT
AAAAAACTTAAAAAAAGTTGGCTTTCCAACATTGCCATTAATGCTTAGCC
ATGGGGTTTTTGGTTTTTCCTGGTTATTGAATAATTAACT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated