DW043225
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043225 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s22260.1 () HSP 1 Score: 112.849 bits (281), Expect = 1.605e-25 Identity = 66/130 (50.77%), Postives = 83/130 (63.85%), Query Frame = 2 Query: 32 KSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTSPM 412 K++ KK ++S L + K G S SD SSSP+ S M + T FTKPKPK LEDLV E+ R I +RSHSNPKER+ DKQA+KRLSLPN+G G AQ + R A + P+SQKP+KD S + Sbjct: 149 KTTTKKGVASNLQSTISSQKTGPSHSDGGSSSPSKSAGMLDVPDTLFTKPKPKLVLEDLVEEANSRRAIVTRSHSNPKERTTQLDKQARKRLSLPNSGGGTGAQVARH-SRNATRGAPSSQKPIKDRSKL 277
BLAST of DW043225 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s02110.1 () HSP 1 Score: 98.9821 bits (245), Expect = 2.398e-21 Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 32 KSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQ 319 K++ KK I+S L + K G S SD SSSP+ S M EA T F+KPKPK LEDLV E+ +P + +RSHSNPKER+ DKQAKKRLSLPN+GQ Sbjct: 297 KTTAKKAIASDLQSTISSQKKGPSHSDGGSSSPSKSAGMLEAPNTLFSKPKPKPVLEDLVEEAISKPAMATRSHSNPKERTTQLDKQAKKRLSLPNSGQ 395
BLAST of DW043225 vs. P. persica 1.0 peptide
Match: ppa005948m () HSP 1 Score: 131.724 bits (330), Expect = 2.364e-31 Identity = 73/128 (57.03%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 32 KSSGKKPISSKLHPN---HKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 KS+GK+P+SS + N ++G SD C SSP+ S M EA+ TQ KPK K LED V E +PGI SRSHSNPKERS SDKQAKKRLSLPN+ GL QT++ P R VK TP SQKP+K S Sbjct: 289 KSAGKRPLSSNIQSNLSSQQVGPFNSDGCDSSPSKSAGMLEASTTQMGKPKSKPYLEDPVEEGNSKPGISSRSHSNPKERSTESDKQAKKRLSLPNSRGGLGYQTSRHPIRSNVKGTPGSQKPIKTRS 416
BLAST of DW043225 vs. TrEMBL
Match: A5BY79|A5BY79_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031264 PE=4 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.556e-32 Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHPNHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS------PMETI*IQCIYIV 445 T KS+GKKPIS L N KMG S SD SSSP S QEA+ T KPK K LEDL E+ RPG+GSRSHSNPKERS L DKQAKKRLSLPN+G G AQ T+Q R +K+ ++QKP+KD S +ET +Y++ Sbjct: 1727 TQSKSAGKKPISLNLS-NQKMGPSNSDGGSSSPTKSAMFQEASSTVSAKPKSKPILEDLAEEANSRPGVGSRSHSNPKERSTLQDKQAKKRLSLPNSGIGSGAQATRQQSRSVLKKAASAQKPIKDNSKVNIKGDLETTKSTSVYVI 1872
BLAST of DW043225 vs. TrEMBL
Match: D7T1R0|D7T1R0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037598001 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.118e-31 Identity = 77/128 (60.16%), Postives = 88/128 (68.75%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHPNHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 T KS+GKKPIS L N KMG S SD SSSP S QEA+ T KPK K LEDL E+ RPG+GSRSHSNPKERS L DKQAKKRLSLPN+G G AQ T+Q R +K+ ++QKP+KD S Sbjct: 289 TQSKSAGKKPISLNLS-NQKMGPSNSDGGSSSPTKSAMFQEASSTVSAKPKSKPILEDLAEEANSRPGVGSRSHSNPKERSTLQDKQAKKRLSLPNSGIGSGAQATRQQSRSVLKKAASAQKPIKDNS 415
BLAST of DW043225 vs. TrEMBL
Match: B9RJ06|B9RJ06_RICCO (Calmodulin binding protein, putative OS=Ricinus communis GN=RCOM_1754220 PE=4 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.875e-21 Identity = 66/125 (52.80%), Postives = 76/125 (60.80%), Query Frame = 2 Query: 32 KSSGKKPISSKLH--PNHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKD 400 +SSGKKP+SS N K G S SD SSSP+ ST M E++ T F KPKPK LEDL E +PG RS SNPKERS DK AKKRLSLPN+G AQ + RIA + P K V+D Sbjct: 291 RSSGKKPLSSLQSNLSNQKTGPSHSDG-SSSPSKSTGMLESSNTLFAKPKPKPVLEDLSEEVNLKPGTVQRSQSNPKERSIQPDKPAKKRLSLPNSGGSAGAQPARH-SRIAARGAPGPHKSVRD 413
BLAST of DW043225 vs. TrEMBL
Match: B9HQ80|B9HQ80_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_878788 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.855e-19 Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 32 KSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQ 319 K++ KK I+S L + K G S SD SSSP+ S M EA T F+KPKPK LEDLV E+ +P + +RSHSNPKER+ DKQAKKRLSLPN+GQ Sbjct: 297 KTTAKKAIASDLQSTISSQKKGPSHSDGGSSSPSKSAGMLEAPNTLFSKPKPKPVLEDLVEEAISKPAMATRSHSNPKERTTQLDKQAKKRLSLPNSGQ 395
BLAST of DW043225 vs. TrEMBL
Match: B9GHL2|B9GHL2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_751929 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.672e-17 Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 32 KSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNG 316 K++ KK ++S L + K G S SD SSSP+ S M + T FTKPKPK LEDLV E+ R I +RSHSNPKER+ DKQA+KRLSLPN+G Sbjct: 293 KTTTKKGVASNLQSTISSQKTGPSHSDGGSSSPSKSAGMLDVPDTLFTKPKPKLVLEDLVEEANSRRAIVTRSHSNPKERTTQLDKQARKRLSLPNSG 390
BLAST of DW043225 vs. TrEMBL
Match: Q9LIE3|Q9LIE3_ARATH (Similarity to SF16 protein OS=Arabidopsis thaliana GN=At3g22190 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.596e-16 Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 T KS K P +S L + G QSD SSSP IS+S + +K K K +DL E RPG G RSHSNPKERS ++ +K+RLSLPN+G+ L +Q+TK A K TP SQK V++ S Sbjct: 280 TQIKSVSKMPNTSNLVSGVSSQMTGPCQSDGDSSSPGISSS-----IPVVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKERSREPNRSSKERLSLPNSGKSLGSQSTK--ANRAGKLTPASQKVVEEKS 403
BLAST of DW043225 vs. TrEMBL
Match: D7L1L4|D7L1L4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_898681 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.765e-14 Identity = 59/131 (45.04%), Postives = 74/131 (56.49%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 T KS K P +S L + G QSD SSSP IS+S + +K K K +DL E RPG G RSHSNPKERS ++ +K+RLSLPN+G+ L +QT K G A K T TSQ V++ S Sbjct: 282 TQMKSVSKVPNTSNLVSGISSQMTGPCQSDGNSSSPGISSS-----IPVVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKERSREPNRSSKERLSLPNSGKSLGSQTAK--GNRA-KLTTTSQNVVEEKS 404
BLAST of DW043225 vs. Vitis vinifera peptide
Match: GSVIVT01037598001 (assembled CDS) HSP 1 Score: 140.198 bits (352), Expect = 5.687e-34 Identity = 77/128 (60.16%), Postives = 88/128 (68.75%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHPNHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 T KS+GKKPIS L N KMG S SD SSSP S QEA+ T KPK K LEDL E+ RPG+GSRSHSNPKERS L DKQAKKRLSLPN+G G AQ T+Q R +K+ ++QKP+KD S Sbjct: 289 TQSKSAGKKPISLNLS-NQKMGPSNSDGGSSSPTKSAMFQEASSTVSAKPKSKPILEDLAEEANSRPGVGSRSHSNPKERSTLQDKQAKKRLSLPNSGIGSGAQATRQQSRSVLKKAASAQKPIKDNS 415
BLAST of DW043225 vs. TAIR peptide
Match: AT3G22190.2 (| Symbols: IQD5 | IQ-domain 5 | chr3:7831280-7833512 REVERSE LENGTH=422) HSP 1 Score: 87.4261 bits (215), Expect = 6.359e-18 Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 T KS K P +S L + G QSD SSSP IS+S + +K K K +DL E RPG G RSHSNPKERS ++ +K+RLSLPN+G+ L +Q+TK A K TP SQK V++ S Sbjct: 282 TQIKSVSKMPNTSNLVSGVSSQMTGPCQSDGDSSSPGISSS-----IPVVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKERSREPNRSSKERLSLPNSGKSLGSQSTK--ANRAGKLTPASQKVVEEKS 405
BLAST of DW043225 vs. TAIR peptide
Match: AT3G22190.1 (| Symbols: IQD5 | IQ-domain 5 | chr3:7831280-7833512 REVERSE LENGTH=422) HSP 1 Score: 87.4261 bits (215), Expect = 6.359e-18 Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 23 TPFKSSGKKPISSKLHP---NHKMGLSQSDVCSSSPNISTSMQEATVTQFTKPKPKSPLEDLVGESGPRPGIGSRSHSNPKERSALSDKQAKKRLSLPNNGQGLRAQTTKQPGRIAVKRTPTSQKPVKDTS 406 T KS K P +S L + G QSD SSSP IS+S + +K K K +DL E RPG G RSHSNPKERS ++ +K+RLSLPN+G+ L +Q+TK A K TP SQK V++ S Sbjct: 282 TQIKSVSKMPNTSNLVSGVSSQMTGPCQSDGDSSSPGISSS-----IPVVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKERSREPNRSSKERLSLPNSGKSLGSQSTK--ANRAGKLTPASQKVVEEKS 405 The following BLAST results are available for this feature:
BLAST of DW043225 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of DW043225 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043225 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 7
BLAST of DW043225 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of DW043225 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043225 ID=DW043225; Name=DW043225; organism=Vaccinium corymbosum; type=EST; length=607bpback to top |