DW043243 | GDV

EST Overview


Name	DW043243
Unique Name	DW043243
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	674

Libraries


Library Name	Type
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosum	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of DW043243 vs. DB:swissprot:display
Match: BAM3_ARATH (Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.187e-22
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = -1

Query:  234 VLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 470
            V+ T++SDSGNGL+AFTYLR++KRLFEG+NW+ LV F K M E G   RL + DT+ +DLYVGF+K K    ++EAALV
Sbjct:  470 VVATNRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNMKEGGHGRRLSKEDTTGSDLYVGFVKGKIAENVEEAALV 548

HSP 2 Score: 27.335 bits (59), Expect = 4.187e-22
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD  A+ +
Sbjct:  453 LAGENALERYDSSAFGQ 469

[Close]

BLAST of DW043243 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s03330.1 ()

HSP 1 Score: 105.916 bits (263), Expect = 2.328e-26
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = -1

Query:  237 GCVCTVLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAAL 485
            G    VL TS+S+SGNGL+AFTYLR++K+LFEG+NWR LV F K MSE GR  +L E D+  T+LY+GFIK+K++ K KEAAL
Sbjct:  464 GAYTQVLATSRSESGNGLTAFTYLRMNKKLFEGDNWRQLVEFVKSMSEGGRNEKLSECDSHGTNLYIGFIKDKSVQKTKEAAL 546

HSP 2 Score: 30.8018 bits (68), Expect = 2.328e-26
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD GAY +
Sbjct:  452 LAGENALERYDAGAYTQ 468

[Close]

BLAST of DW043243 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s08360.1 ()

HSP 1 Score: 103.219 bits (256), Expect = 3.243e-25
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = -1

Query:  237 GCVCTVLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAAL 485
            G    V+ TS+S+SGNGL+AFTYLR++KRLFEG+NW HLV F + MSE GR  +L E D+S T+LYVGFIK+K++ K  E AL
Sbjct:  465 GAFSQVMATSRSESGNGLTAFTYLRMNKRLFEGDNWLHLVQFVESMSEGGRHGKLSECDSSGTNLYVGFIKDKSVQKTTEVAL 547

HSP 2 Score: 29.6462 bits (65), Expect = 3.243e-25
Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD GA+++
Sbjct:  453 LAGENALERYDAGAFSQ 469

[Close]

BLAST of DW043243 vs. P. persica 1.0 peptide
Match: ppa003812m ()

HSP 1 Score: 100.908 bits (250), Expect = 5.320e-22
Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = -1

Query:  234 GIDPAWGECIGEVRRGCVCTVLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 530
            GID A    +     G    VL TS+SDSGN LSAFTYLR++KRLFE +NWR++V F +GM + GR   L E D++ ++L+V FIKEKN+ K KE  LV
Sbjct:  449 GIDLAGENALERYDTGAFEQVLATSRSDSGNALSAFTYLRMNKRLFEADNWRNMVEFVRGMGDGGRNRSLSECDSTGSNLFVRFIKEKNVKKTKETVLV 547

[Close]

BLAST of DW043243 vs. P. persica 1.0 peptide
Match: ppa005431m ()

HSP 1 Score: 48.9062 bits (115), Expect = 1.221e-7
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = -1

Query:  336 LKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDG 467
            L    +  GN + AFTYLR++  LF+ +NWRH V F K M E G
Sbjct:  387 LNIEGNTEGNQMCAFTYLRMNPHLFQPDNWRHFVAFVKKMKEKG 430

HSP 2 Score: 23.8682 bits (50), Expect = 1.221e-7
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = -2

Query:  476 LPGENALERYDEGAY 520
            L GENAL RYD+ A+
Sbjct:  364 LAGENALPRYDDYAH 378

[Close]

BLAST of DW043243 vs. TrEMBL
Match: B9MTV8|B9MTV8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589941 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.986e-24
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = -1

Query:  237 GCVCTVLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAAL 485
            G    VL TS+S+SGNGL+AFTYLR++K+LFEG+NWR LV F K MSE GR  +L E D+  T+LY+GFIK+K++ K KEAAL
Sbjct:  464 GAYTQVLATSRSESGNGLTAFTYLRMNKKLFEGDNWRQLVEFVKSMSEGGRNEKLSECDSHGTNLYIGFIKDKSVQKTKEAAL 546

HSP 2 Score: 30.8018 bits (68), Expect = 2.986e-24
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD GAY +
Sbjct:  452 LAGENALERYDAGAYTQ 468

[Close]

BLAST of DW043243 vs. TrEMBL
Match: Q94EU9|Q94EU9_SOLTU (Beta-amylase PCT-BMYI OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.886e-24
Identity = 55/84 (65.48%), Postives = 62/84 (73.81%), Query Frame = -1

Query:  234 GCVCTVLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 485
            G    VL TS SDSGNGLSAFT+LR++KRLFE ENWR+LV F K MSE GR   LPE D+SRTDLYV FIKE +  K  E A+V
Sbjct:  462 GAFSQVLATSMSDSGNGLSAFTFLRMNKRLFEPENWRNLVQFVKSMSEGGRNASLPECDSSRTDLYVRFIKESHSKKATEVAVV 545

HSP 2 Score: 29.261 bits (64), Expect = 3.886e-24
Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD GA+++
Sbjct:  450 LAGENALERYDGGAFSQ 466

[Close]

BLAST of DW043243 vs. TrEMBL
Match: A5AGI9|A5AGI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032500 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.582e-24
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = -1

Query:  234 VLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFI-KEKNLGKIKEAALV 470
            VL TS+SDSGNGLSAFTYLR++KRLFEG+NWR LV F + MSE GR  RLPE D+S TD Y+GFI K+K++ K  EAALV
Sbjct:  465 VLATSRSDSGNGLSAFTYLRMNKRLFEGDNWRSLVEFVRNMSEGGR-NRLPECDSSGTDXYIGFIKKKKDVAKTMEAALV 543

HSP 2 Score: 30.4166 bits (67), Expect = 6.582e-24
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD  AYA+
Sbjct:  448 LAGENALERYDSSAYAQ 464

[Close]

BLAST of DW043243 vs. TrEMBL
Match: B9RUR8|B9RUR8_RICCO (Beta-amylase, putative OS=Ricinus communis GN=RCOM_0856140 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.888e-23
Identity = 49/79 (62.03%), Postives = 65/79 (82.28%), Query Frame = -1

Query:  234 VLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 470
            VL TS+S+SGNGL+AFTYLR++K+LFEG++W+HLV F K MSE G+  RLPE D+  T+LY+GFIK+KN  + KE AL+
Sbjct:  469 VLATSRSESGNGLTAFTYLRMNKKLFEGDHWQHLVEFVKSMSEHGQNKRLPECDSEGTNLYIGFIKDKNAIRTKEVALL 547

HSP 2 Score: 28.4906 bits (62), Expect = 1.888e-23
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD   YA+
Sbjct:  452 LAGENALERYDAAGYAQ 468

[Close]

BLAST of DW043243 vs. TrEMBL
Match: A9PGR1|A9PGR1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580143 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.159e-23
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = -1

Query:  237 GCVCTVLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAAL 485
            G    V+ TS+S+SGNGL+AFTYLR++KRLFEG+NW HLV F + MSE GR  +L E D+S T+LYVGFIK+K++ K  E AL
Sbjct:  465 GAFSQVMATSRSESGNGLTAFTYLRMNKRLFEGDNWLHLVQFVESMSEGGRHGKLSECDSSGTNLYVGFIKDKSVQKTTEVAL 547

HSP 2 Score: 29.6462 bits (65), Expect = 4.159e-23
Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD GA+++
Sbjct:  453 LAGENALERYDAGAFSQ 469

[Close]

BLAST of DW043243 vs. TrEMBL
Match: Q5F305|Q5F305_SOYBN (Beta-amylase OS=Glycine max GN=bmy2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.158e-21
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = -1

Query:  234 VLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 470
            VL TS+S+SG+GL+AFTYLR++KRLFE +NWRHLV F + MSE GR  RLP +D+  +DLYVG IK       +EAALV
Sbjct:  462 VLSTSKSESGSGLAAFTYLRMNKRLFEADNWRHLVDFVRSMSEGGRRERLPAADSHGSDLYVGHIKATQEKHTQEAALV 540

HSP 2 Score: 29.6462 bits (65), Expect = 2.158e-21
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD  AYA+
Sbjct:  445 LAGENALERYDADAYAQ 461

[Close]

BLAST of DW043243 vs. TrEMBL
Match: D7MC27|D7MC27_ARALY (Beta-amylase 8 OS=Arabidopsis lyrata subsp. lyrata GN=CT-BMY PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-20
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = -1

Query:  234 VLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 470
            V+ T++SDSGNGL+AFTYLR++KRLFEG+NW+ LV F K M E G   RL + DT+ +DLYVGF+K +    ++EAALV
Sbjct:  470 VVATNRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNMKEGGHGRRLSKEDTTGSDLYVGFVKGRIAENVEEAALV 548

HSP 2 Score: 27.335 bits (59), Expect = 1.360e-20
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD  A+ +
Sbjct:  453 LAGENALERYDSSAFGQ 469

[Close]

BLAST of DW043243 vs. TrEMBL
Match: Q9AY35|Q9AY35_ORYSA (Putative chloroplast-targeted beta-amylase OS=Oryza sativa GN=OSJNBa0027P10.19 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.156e-14
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = -1

Query:  240 GLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAA 437
            GL AFTYLR++K+LF+G+NWR  V F + M++ G    LP  DT ++DLYVGF++++   + + AA
Sbjct:  474 GLGAFTYLRMNKKLFDGDNWRQFVSFVRAMADGGERAALPSCDTEQSDLYVGFLEKRAAPEAEAAA 539

HSP 2 Score: 30.8018 bits (68), Expect = 1.156e-14
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYDE A+A+
Sbjct:  449 LAGENALERYDEAAFAQ 465

[Close]

BLAST of DW043243 vs. TrEMBL
Match: Q7XC23|Q7XC23_ORYSJ (Glycosyl hydrolase family 14 protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g41550 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.156e-14
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = -1

Query:  240 GLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAA 437
            GL AFTYLR++K+LF+G+NWR  V F + M++ G    LP  DT ++DLYVGF++++   + + AA
Sbjct:  474 GLGAFTYLRMNKKLFDGDNWRQFVSFVRAMADGGERAALPSCDTEQSDLYVGFLEKRAAPEAEAAA 539

HSP 2 Score: 30.8018 bits (68), Expect = 1.156e-14
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYDE A+A+
Sbjct:  449 LAGENALERYDEAAFAQ 465

[Close]

BLAST of DW043243 vs. TrEMBL
Match: Q0IVL0|Q0IVL0_ORYSJ (Os10g0565200 protein OS=Oryza sativa subsp. japonica GN=Os10g0565200 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.157e-14
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = -1

Query:  240 GLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAA 437
            GL AFTYLR++K+LF+G+NWR  V F + M++ G    LP  DT ++DLYVGF++++   + + AA
Sbjct:  452 GLGAFTYLRMNKKLFDGDNWRQFVSFVRAMADGGERAALPSCDTEQSDLYVGFLEKRAAPEAEAAA 517

HSP 2 Score: 30.8018 bits (68), Expect = 1.157e-14
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYDE A+A+
Sbjct:  427 LAGENALERYDEAAFAQ 443

[Close]

BLAST of DW043243 vs. TAIR peptide
Match: AT4G17090.1 (| Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548)

HSP 1 Score: 98.2117 bits (243), Expect = 4.238e-23
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = -1

Query:  234 VLKTSQSDSGNGLSAFTYLRLSKRLFEGENWRHLVGFAKGMSEDGRITRLPESDTSRTDLYVGFIKEKNLGKIKEAALV 470
            V+ T++SDSGNGL+AFTYLR++KRLFEG+NW+ LV F K M E G   RL + DT+ +DLYVGF+K K    ++EAALV
Sbjct:  470 VVATNRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVKNMKEGGHGRRLSKEDTTGSDLYVGFVKGKIAENVEEAALV 548

HSP 2 Score: 27.335 bits (59), Expect = 4.238e-23
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = -2

Query:  470 LPGENALERYDEGAYAR 520
            L GENALERYD  A+ +
Sbjct:  453 LAGENALERYDSSAFGQ 469

The following BLAST results are available for this feature:

BLAST of DW043243 vs. DB:swissprot:display
BLAST of DW043243 vs. Populus trichocarpa peptide v2.0
BLAST of DW043243 vs. P. persica 1.0 peptide
BLAST of DW043243 vs. TrEMBL
BLAST of DW043243 vs. TAIR peptide

BLAST of DW043243 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
BAM3_ARATH	4.187e-22	59.49	Beta-amylase 3, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of DW043243 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0003s03330.1	2.328e-26	61.45		[more]
POPTR_0003s08360.1	3.243e-25	60.24		[more]

BLAST of DW043243 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa003812m	5.320e-22	52.53		[more]
ppa005431m	1.221e-7	47.73		[more]

BLAST of DW043243 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9MTV8\|B9MTV8_POPTR	2.986e-24	61.45	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q94EU9\|Q94EU9_SOLTU	3.886e-24	65.48	Beta-amylase PCT-BMYI OS=Solanum tuberosum PE=2 SV...	[more]
A5AGI9\|A5AGI9_VITVI	6.582e-24	68.75	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RUR8\|B9RUR8_RICCO	1.888e-23	62.03	Beta-amylase, putative OS=Ricinus communis GN=RCOM...	[more]
A9PGR1\|A9PGR1_POPTR	4.159e-23	60.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q5F305\|Q5F305_SOYBN	2.158e-21	60.76	Beta-amylase OS=Glycine max GN=bmy2 PE=2 SV=1	[more]
D7MC27\|D7MC27_ARALY	1.360e-20	58.23	Beta-amylase 8 OS=Arabidopsis lyrata subsp. lyrata...	[more]
Q9AY35\|Q9AY35_ORYSA	1.156e-14	46.97	Putative chloroplast-targeted beta-amylase OS=Oryz...	[more]
Q7XC23\|Q7XC23_ORYSJ	1.156e-14	46.97	Glycosyl hydrolase family 14 protein, expressed OS...	[more]
Q0IVL0\|Q0IVL0_ORYSJ	1.157e-14	46.97	Os10g0565200 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of DW043243 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G17090.1	4.238e-23	59.49	\| Symbols: CT-BMY, BAM3, BMY8 \| chloroplast beta-a...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 2..13 score
None	No IPR available	SEG	seg	seg	coord: 52..71 score
None	No IPR available	SEG	seg	seg	coord: 3..20 score
IPR013781	Glycoside hydrolase, subgroup, catalytic core	GENE3D	3.20.20.80	no description	coord: 73..122 score: 9.9

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DW043243 ID=DW043243; Name=DW043243; organism=Vaccinium corymbosum; type=EST; length=674bp
GTGGTGAACAATGTCAAAATACAAAAGTACTCCACAATTTTAATAATTCT
TGTGGTGAACAATGTCAAAATACAAAAGTACTCCACAATTTTAATAATTC
TTGTGGTGAACGAAAGCTTTAGAGCTTAGCTATATCGGATATACAGTATT
TTCGATCCTTTTTTTTCTTACATTCTCACGTGCCGAGTTATACTAAACGA
TTCGGTAGCGAACACGCTTACAATAATGCTTCACACTAAAGCTGCCTCCT
TTATCTTCCCCAAATTTTTCTCCTTTATGAATCCAACATAAAGGTCCGTT
CTGCTTGTGTCGCTCTCCGGAAGTCTTGTGATCCGGCCATCTTCCGACAT
GCCCTTCGCGAATCCCACCAAGTGCCGCCAATTCTCCCCTTCAAACAACC
TCTTACTCAATCTCAAGTACGTAAACGCACTCAATCCATTTCCAGAATCC
GATTGACTTGTCTTCAGAACCGTGCATACGCACCCTCGTCGTACCTCTCC
AATGCATTCTCCCCAGGCAGGGTCTATTCCTAGGCAACCTTTAGTTTTGC
CCATCTTTTTAACTTTTGCCCGGAAACGAAGACCCCCTTCNCTTGGGGTG
GAGGCAAGGTTTTTGCCAATGCCCTCCTCGNGTTGCCCTCCCCCAATTCC
TCTCATTTTTCCATTGCCCCGTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0043169	cation binding

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR013781	Glycoside hydrolase, subgroup, catalytic core