DW043430

EST Overview
NameDW043430
Unique NameDW043430
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length600
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of DW043430 vs. TrEMBL
Match: Q68YT3|Q68YT3_VACCO (14 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.661e-10
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -3 
Query:  431 DKIPGVHGGGADQQRGECKPDQRRGD 508
            DKIPGVHGGGADQQRGECKPDQRRGD
Sbjct:   76 DKIPGVHGGGADQQRGECKPDQRRGD 101

HSP 2 Score: 26.1794 bits (56), Expect = 7.661e-10
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = -1 
Query:  541 GVANQQQSECKRDQ 582
            G A+QQQSECK DQ
Sbjct:   50 GSADQQQSECKPDQ 63
The following BLAST results are available for this feature:
BLAST of DW043430 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
Q68YT3|Q68YT3_VACCO7.661e-10100.0014 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 ... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..55
score
NoneNo IPR availableSEGsegsegcoord: 39..57
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043430 ID=DW043430; Name=DW043430; organism=Vaccinium corymbosum; type=EST; length=600bp
CATCATGAACATTTAGAACGCGCGTCAGACACTGAGTAGTGAGACGTACG
NTCCGCATTGACAGAGTTACATTAAAGCATAGATGTCANGTCGCGCATCT
ATACACCAGCCAGAGCTCAAGCACCATGGCGACGATGGTAACATTAATAG
TCATCATCATACAAGATAGATAAAGTATACCGCTCGAAATGACTATAAAG
CATCATCATCTTCGTCATTCCACTTAATACAGCTCGACATATATAACGCA
GTCTGGCCGTTGGAGCACTACTAATCAAACAGCCATGAAGAATAAAAAGC
GACAGGAATGATCACGAAAAAACGCATACCTCGAGTAGTATGCATGTCCA
TATATACTACTGGTCTGTGTAGTACCAAAAAAGTAACTAGCGTACAGGCG
GAAAATAAGACGCGATGATGATTCGATCTAATCACCGCGGCGCTGATCAG
GCTTGCACTCGCCGCGCTGTTGATCAGCACCACCACCATGGACGCCAGGG
ATCTTATCTCACCTTGTCCATAATCCCTCCACCTCCTGCCCTGATCCCGC
TTGCACTCGCTTTGCTGCTGATTAGCTACCCCCATTGGCCGCCAGGCGCC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated