DW043481

EST Overview
NameDW043481
Unique NameDW043481
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length584
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of DW043481 vs. TrEMBL
Match: Q59T40|Q59T40_CANAL (Questionable orf OS=Candida albicans GN=CaO19.14167 PE=4 SV=1)

HSP 1 Score: 42.743 bits (99), Expect = 9.200e-8
Identity = 19/45 (42.22%), Postives = 26/45 (57.78%), Query Frame = -3 
Query:  211 WFVFWGWFWSLRWFVFWALWRFLAIF*FNIFSGW---WFMWRWFI 336
            W V+W  +W +RWF+ W +  F+  F    F GW   WFMW WF+
Sbjct:   12 WVVWWVVWWVVRWFMRWFMRWFMRWF-MRWFVGWFMRWFMW-WFV 54

HSP 2 Score: 37.7354 bits (86), Expect = 9.200e-8
Identity = 19/57 (33.33%), Postives = 24/57 (42.11%), Query Frame = -1 
Query:   12 FSGW-------WFMWRWFIWRLFWSVWW---WFLTXXXXXXXXXXXFMWRWFIWRLF 152
            F GW       WFMWR   W + W + W   WF+               RWF+WR+F
Sbjct:   53 FVGWFMRWFMRWFMWRMMRWFVGWFMRWFMRWFV---------------RWFMWRMF 94
The following BLAST results are available for this feature:
BLAST of DW043481 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
Q59T40|Q59T40_CANAL9.200e-842.22Questionable orf OS=Candida albicans GN=CaO19.1416... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 17..25
score: NAcoord: 32..58
score
NoneNo IPR availableSEGsegsegcoord: 57..63
score
NoneNo IPR availableSEGsegsegcoord: 4..17
score: NAcoord: 24..48
score: NAcoord: 55..69
score
NoneNo IPR availableSEGsegsegcoord: 18..26
score: NAcoord: 38..57
score: NAcoord: 69..81
score
NoneNo IPR availableSEGsegsegcoord: 49..64
score: NAcoord: 83..91
score: NAcoord: 93..107
score: NAcoord: 114..138
score: NAcoord: 145..157
score
NoneNo IPR availableSEGsegsegcoord: 27..53
score: NAcoord: 60..68
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043481 ID=DW043481; Name=DW043481; organism=Vaccinium corymbosum; type=EST; length=584bp
GTACGCGGGCAAAACAACCTCCATATAAACCACCTCCACATAAACCACCA
CCCACTGAAAATGCTGAACTAAAATATGGTAAGAAACCACCACCATACGG
ACCAAAACAACCTCCATATAAACCACCTCCACATAAACCACCACCCACTG
AAAATGTTGAACTAAAATATGGTAAGAAACCACCACCATACGGACCAAAA
CGACCTCCATTATAAACCACCTCCACATAAACCACCACCCACTGAAAATG
TTGAACTAAAATATGGCAAGAAACCTCCAAAGGGCCCAAAATACAAACCA
CCGAAGGGACCAAAACCACCCCCAAAACACAAACCACCGGTTTGAACTGA
GGGACTTGCTTTGTGTGGAGTGAAGTACAATAATAACAAAGAAATCTGCA
CAAAAAATGCGTGGCCTCAAAATCATTCTGTTTAGTGGTTCCCAAGTTCC
ACCACCAACAGTTTGGAATTTGGGGCCGCGCCATTTATTTCCTTTTGTTA
AAAATTTTCCTTGGAAGCCTTCCCCTTTGTTTTATATTTGTTTTTTTAAA
TTTAAAAAATTTGTGACCAAATTGGTTTGTTCCC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated