HO054795

EST Overview
NameHO054795
Unique NameHO054795
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length706
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of HO054795 vs. DB:swissprot:display
Match: HIGB1_VIBCH (Toxin higB-1 OS=Vibrio cholerae GN=higB-1 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 2.340e-8
Identity = 30/56 (53.57%), Postives = 36/56 (64.29%), Query Frame = -2
Query:   88 ANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMW 255
            ++I  A  RKL++LDAA     LR PPGNR E L GN  G  SIR+N Q+RL F W
Sbjct:   25 SSIENALFRKLEILDAAQAESDLRIPPGNRFEHLEGNLKGWCSIRVNKQYRLIFQW 80          
BLAST of HO054795 vs. TrEMBL
Match: C5V7F0|C5V7F0_9PROT (Plasmid maintenance system killer OS=Gallionella capsiferriformans ES-2 GN=GalfDRAFT_2683 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.369e-24
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = -2
Query:   82 MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHS 321
            MI  F+C +TEALFHGK + RFANI + A RKLQ ++AA  L+FLR PPGNRLESL G+R GQHSIRIN Q+R+CF+W S
Sbjct:    1 MITDFKCKETEALFHGKRIARFANISSVAMRKLQQVNAAVALDFLRVPPGNRLESLSGDRVGQHSIRINEQWRICFIWQS 80          
BLAST of HO054795 vs. TrEMBL
Match: Q0K0W5|Q0K0W5_RALEH (Plasmid maintenance system killer protein OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=higB PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.545e-23
Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = -2
Query:   88 MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMW 321
            MI SFRC+DT  LF G+ VPRF NIRA AERKL++L  A+TLEFLR+PPGNRL+ L G+R G++SIRIN Q+R+CF+W
Sbjct:   24 MIQSFRCSDTAELFAGRCVPRFGNIRAVAERKLRLLQRASTLEFLRSPPGNRLQLLTGDRKGRYSIRINEQWRICFIW 101          
BLAST of HO054795 vs. TrEMBL
Match: C5SZJ8|C5SZJ8_ACIDE (Plasmid maintenance system killer OS=Acidovorax delafieldii 2AN GN=AcdelDRAFT_0078 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.563e-22
Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = -2
Query:   76 ILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHSIG 318
            ILSF+C DT+ LF      RFANI++ AERKL  LDAA TL+FLR+PPGNRLE L G+R GQHSIRIN Q+R+CF+W   G
Sbjct:    3 ILSFKCQDTQRLFTSGKTRRFANIQSVAERKLAQLDAAQTLDFLRSPPGNRLELLIGDRQGQHSIRINDQWRVCFVWTEKG 83          
BLAST of HO054795 vs. TrEMBL
Match: Q0AJN2|Q0AJN2_NITEC (Plasmid maintenance system killer OS=Nitrosomonas eutropha (strain C91) GN=Neut_0151 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.571e-22
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = -2
Query:   76 MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHSIG 321
            MI SFRC  T+A+F G+   RF+ I+AAAERKL  L+AA TL+FLR+PPGNRLE L G+R+GQ SIRIN Q+R+CF W  +G
Sbjct:    4 MIQSFRCKSTQAVFEGEYPQRFSAIQAAAERKLAQLEAAQTLDFLRSPPGNRLEKLAGDREGQWSIRINAQWRICFTWSDLG 85          
BLAST of HO054795 vs. TrEMBL
Match: A5W855|A5W855_PSEP1 (Plasmid maintenance system killer OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_4191 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.462e-21
Identity = 54/89 (60.67%), Postives = 63/89 (70.79%), Query Frame = -2
Query:   55 MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHSIGRIGASHV 321
            MI SF CADTEALF      R+++I++ AERKL MLDAA  L  LR+PPGNRLESL GNR GQHSIR+N Q+RLCF W   G +    V
Sbjct:    1 MIQSFSCADTEALFTTGKTRRWSDIKSVAERKLAMLDAATELRDLRSPPGNRLESLSGNRAGQHSIRVNDQWRLCFTWTEHGPVNVEIV 89          
BLAST of HO054795 vs. TrEMBL
Match: A9BUF3|A9BUF3_DELAS (Plasmid maintenance system killer OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=Daci_1212 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.909e-21
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = -2
Query:   76 ILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHSIG 318
            I SF+C +T+ LF      RFANI++ AERKL  LDAA TLEFLR+PPGNRLE L G+R GQHSIRIN Q+R+CF+W   G
Sbjct:    3 ITSFKCPETQRLFTSGKTRRFANIQSVAERKLAQLDAAVTLEFLRSPPGNRLEMLVGDRQGQHSIRINDQWRVCFVWTEKG 83          
BLAST of HO054795 vs. TrEMBL
Match: D6Z3H7|D6Z3H7_9DELT (Plasmid maintenance system killer OS=Desulfurivibrio alkaliphilus AHT2 GN=DaAHT2_1407 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.494e-21
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = -2
Query:   88 ILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMW 318
            I SF+C DT+ LF G+ V RF NI + A RKL ML+ A TL+ LR PPGNRLE+L GNR GQHS+R+NGQ R+CF+W
Sbjct:    3 IKSFKCPDTQCLFAGQRVKRFVNIESVAMRKLAMLNRAVTLDDLRVPPGNRLEALKGNRTGQHSVRVNGQIRICFVW 79          
BLAST of HO054795 vs. TrEMBL
Match: C3K861|C3K861_PSEFS (Putative plasmid maintenance system killer protein OS=Pseudomonas fluorescens (strain SBW25) GN=PFLU_1109 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.254e-21
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = -2
Query:   88 MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMW 321
            MI SF+CADT  LF      R++ I + AERKL MLDAA  L  LR+PPGNRLE L+G+R+GQHSIRINGQFR+CF+W
Sbjct:    1 MIRSFKCADTRTLFETGRTRRWSAILSVAERKLSMLDAAVELTDLRSPPGNRLEQLYGDREGQHSIRINGQFRICFIW 78          
BLAST of HO054795 vs. TrEMBL
Match: Q82X18|Q82X18_NITEU (Putative uncharacterized protein OS=Nitrosomonas europaea GN=NE0482 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.256e-21
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = -2
Query:   79 MILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHSI 321
            MI SFRC  T+A+F G+   RF+ I+A AERKL  L+AA TL+FLR+PPGNRLE L G+R+GQ SIRIN Q+R+CF W  +
Sbjct:    4 MIQSFRCKSTQAMFEGECPQRFSAIQAVAERKLAQLEAAQTLDFLRSPPGNRLEKLAGDREGQWSIRINAQWRICFTWSDL 84          
BLAST of HO054795 vs. TrEMBL
Match: C6XA68|C6XA68_METSD (Plasmid maintenance system killer OS=Methylovorus sp. (strain SIP3-4) GN=Msip34_2367 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.256e-21
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = -2
Query:   76 ILSFRCADTEALFHGKSVPRFANIRAAAERKLQMLDAAATLEFLRTPPGNRLESLHGNRDGQHSIRINGQFRLCFMWHSIG 318
            I +F C DT+ ++ GK   RF NI A AERKLQMLDAA  L+ LR+PPGNRLE+L G+R GQHSIRIN Q+R+CF+W + G
Sbjct:    3 IQTFLCQDTQDIYEGKHPRRFRNIEAVAERKLQMLDAAVELKDLRSPPGNRLEALIGDRAGQHSIRINDQWRICFVWTATG 83          
The following BLAST results are available for this feature:
BLAST of HO054795 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
HIGB1_VIBCH2.340e-853.57Toxin higB-1 OS=Vibrio cholerae GN=higB-1 PE=1 SV=... [more]
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BLAST of HO054795 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
C5V7F0|C5V7F0_9PROT5.369e-2466.25Plasmid maintenance system killer OS=Gallionella c... [more]
Q0K0W5|Q0K0W5_RALEH4.545e-2366.67Plasmid maintenance system killer protein OS=Ralst... [more]
C5SZJ8|C5SZJ8_ACIDE6.563e-2264.20Plasmid maintenance system killer OS=Acidovorax de... [more]
Q0AJN2|Q0AJN2_NITEC8.571e-2262.20Plasmid maintenance system killer OS=Nitrosomonas ... [more]
A5W855|A5W855_PSEP11.462e-2160.67Plasmid maintenance system killer OS=Pseudomonas p... [more]
A9BUF3|A9BUF3_DELAS1.909e-2162.96Plasmid maintenance system killer OS=Delftia acido... [more]
D6Z3H7|D6Z3H7_9DELT2.494e-2162.34Plasmid maintenance system killer OS=Desulfurivibr... [more]
C3K861|C3K861_PSEFS4.254e-2164.10Putative plasmid maintenance system killer protein... [more]
Q82X18|Q82X18_NITEU7.256e-2160.49Putative uncharacterized protein OS=Nitrosomonas e... [more]
C6XA68|C6XA68_METSD7.256e-2161.73Plasmid maintenance system killer OS=Methylovorus ... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 55..75
score
NoneNo IPR availableSEGsegsegcoord: 2..13
score
NoneNo IPR availableSUPERFAMILY143011RelE-likecoord: 6..84
score: 8.8
IPR007711Plasmid maintenance system killerPFAMPF05015Plasmid_killercoord: 6..85
score: 2.2

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO054795 ID=HO054795; Name=HO054795; organism=Vaccinium corymbosum; type=EST; length=706bp
GNNTGCGANTGCTGGGAGGGCTCATGACGGTCTTTCAGTGGTAATCGATG
ATTTCACGTGGGATGCTCCGATGCGTCCGATGCTGTGCCACATGAAGCAA
AGCCGGAATTGGCCGTTGATGCGGATGCTGTGCTGGCCGTCCCGGTTGCC
GTGAAGTGACTCCAGGCGGTTGCCTGGCGGAGTACGCAGGAATTCCAACG
TAGCAGCTGCATCCAGCATCTGCAGCTTGCGTTCGGCCGCAGCACGGATG
TTGGCAAAGCGAGGCACCGACTTTCCGTGAAATAAGGCTTCGGTATCTGC
GCATCGGAAGCTGAGTATCATGGTGAGCGTATAACGTTATTCGTTACTCG
GGACTCATCAACGTACTCTGAGTTGAAGTGCGATGCCGTCCTTCGATCAG
AGTGGTTAATTTTGGATGTCTTTGGACCTGACCTACATGCATGAGAAACC
AGGAGTGAGATCCACGCCTACTTTTGTTGCCTGCTGCCCCACTCGCATCG
CGTGAGATAACTAACAAAATGGCTGACATTCTAACAAACTCCTTCTCTCT
GTGGATTTCGCATATTGGGATACGACGTAACTATTCAAGATCACAATGCA
AAAAACAAAAAAACCCCTGCTACAGATCCCTGTCCTCCCTCCCGTGGGGT
TCAAAAGACCCGATGTGGGGCCATCTCCCAGCAAACCCTCCTCAATTGTG
GAATCA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR007711Plasmid maintenance system killer