CF810588
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF810588 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s05400.1 () HSP 1 Score: 68.5514 bits (166), Expect = 3.915e-12 Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 1 Query: 82 MASMSVPKTLVFNFSRAF---PQSLYPSSLPLHPKVSRVCFTS-TSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEG 564 MA++ + K + N S+A P SL+P+S P KVSRVCFT+ SKY+EGR A E + + ++A E ++ DR KE A++ +M T ++ AAE KEGTYKA ETV E+TKEG Sbjct: 1 MAAIIIAKNAMLNLSKALIPQPPSLFPNSTP---KVSRVCFTTYASKYNEGRYAAEEDEDRASG-------------FSERAKETANETIDRTKERAEKAKERSKEMKEKVKGNAEEMKEKAKGYAHETKESAKGTAQS---AAEKVKEGTYKAAETV-ERTKEG 145
BLAST of CF810588 vs. P. persica 1.0 peptide
Match: ppa025979m () HSP 1 Score: 65.0846 bits (157), Expect = 3.059e-11 Identity = 58/192 (30.21%), Postives = 75/192 (39.06%), Query Frame = 1 Query: 82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHP-KVSRVCFTSTSKYSEGRIAGEGRR-----------------------EVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADR----XXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKA---GETVAEKTKEG 564 MA +S+ + +VFN SR+FPQ+ SL KVSRVCFTS SK+SEGR A E R V ++ A QKA E+KD + +E ++ T + GT A+ AKEGTYKA ET +K KEG Sbjct: 1 MAVISLARNVVFNLSRSFPQASSSISLRYSSRKVSRVCFTSASKFSEGRNAAEENRGDSRVDSRGSADKKWKNKEREYGSVDVSRKAKEPMEEGLEKSKQKAEEVKDTTKEYAQEAKEKTKGAVEMVAEKAKQGTNRAAETAESAKEKAKDYSYKSEKKTKDMAGTLADKAKEGTYKAAETAETAKKKAKEG 192
BLAST of CF810588 vs. P. persica 1.0 peptide
Match: ppa024902m () HSP 1 Score: 58.5362 bits (140), Expect = 2.863e-9 Identity = 53/160 (33.12%), Postives = 65/160 (40.62%), Query Frame = 1 Query: 103 KTLVFNFSRAFPQSLYPSSL-PLHP--KVSRVCF-TSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVA---EKTKE 561 K L+FN S++FPQS PS+L P + KVSRVCF TS +KYSEG + R + A E+ D+ D ET +R T E G+ AE AKEGTYK E A EK KE Sbjct: 3 KNLIFNPSKSFPQS--PSALSPRYSSRKVSRVCFNTSATKYSEGSVDANNRGK-------------------NPAEEMIDRTKDFTHETKERTKSAAEKAKEGTNRAAKTAVSAKEKAKQYAYETKEKTKEVAGSVAEKAKEGTYKVAEMAASAKEKAKE 141
BLAST of CF810588 vs. TrEMBL
Match: B9N3H0|B9N3H0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580921 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.910e-10 Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 1 Query: 82 MASMSVPKTLVFNFSRAF---PQSLYPSSLPLHPKVSRVCFTS-TSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEG 564 MA++ + K + N S+A P SL+P+S P KVSRVCFT+ SKY+EGR A E + + ++A E ++ DR KE A++ +M T ++ AAE KEGTYKA ETV E+TKEG Sbjct: 1 MAAIIIAKNAMLNLSKALIPQPPSLFPNSTP---KVSRVCFTTYASKYNEGRYAAEEDEDRASG-------------FSERAKETANETIDRTKERAEKAKERSKEMKEKVKGNAEEMKEKAKGYAHETKESAKGTAQS---AAEKVKEGTYKAAETV-ERTKEG 145
BLAST of CF810588 vs. TrEMBL
Match: D7TJB6|D7TJB6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021084001 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.437e-9 Identity = 50/162 (30.86%), Postives = 67/162 (41.36%), Query Frame = 1 Query: 82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHPKVSRVCFTSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEGT 567 MA+M + + + N SRAFP++ +L KVSRVCFTS SK SEGR A E RE N +A+E+ +KA ++ +E+ DR DM E KE T E+ AE+ KEGT Sbjct: 1 MATMFIARNTMLNLSRAFPRNR-SIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNMEG-------------RASEMTEKAKEKTRESMDRTKEQAEEVKDRAKQRAEDMTEKAKEGTYKATETAEEAKEKAKERTREMKEKTSDMAESAAERAKEGT 148
BLAST of CF810588 vs. Vitis vinifera peptide
Match: GSVIVT01021084001 (assembled CDS) HSP 1 Score: 66.2402 bits (160), Expect = 1.174e-11 Identity = 50/162 (30.86%), Postives = 67/162 (41.36%), Query Frame = 1 Query: 82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHPKVSRVCFTSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEGT 567 MA+M + + + N SRAFP++ +L KVSRVCFTS SK SEGR A E RE N +A+E+ +KA ++ +E+ DR DM E KE T E+ AE+ KEGT Sbjct: 1 MATMFIARNTMLNLSRAFPRNR-SIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNMEG-------------RASEMTEKAKEKTRESMDRTKEQAEEVKDRAKQRAEDMTEKAKEGTYKATETAEEAKEKAKERTREMKEKTSDMAESAAERAKEGT 148
BLAST of CF810588 vs. Vitis vinifera peptide
Match: GSVIVT01002813001 (assembled CDS) HSP 1 Score: 64.6994 bits (156), Expect = 3.414e-11 Identity = 54/160 (33.75%), Postives = 70/160 (43.75%), Query Frame = 1 Query: 82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHPKVSRVCFTSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKE 561 MA+M + + + N SR FP++ +L KVSRVCFTS SK SEGR A E RE N +A+E+ +KA ++ +E+ DR DM AE AKEGTYKA ET AE+ KE Sbjct: 1 MATMFIARNTMLNLSREFPRNR-SIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNMEG-------------RASEMTEKAKEKTRESMDRTKEQAEEVKDRAKQRAEDM-------------------------AEKAKEGTYKATET-AEEAKE 120 The following BLAST results are available for this feature:
BLAST of CF810588 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CF810588 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of CF810588 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CF810588 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF810588 ID=CF810588; Name=CF810588; organism=Vaccinium corymbosum; type=EST; length=651bpback to top |