CF810588

EST Overview
NameCF810588
Unique NameCF810588
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length651
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CF810588 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s05400.1 ()

HSP 1 Score: 68.5514 bits (166), Expect = 3.915e-12
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 1
Query:   82 MASMSVPKTLVFNFSRAF---PQSLYPSSLPLHPKVSRVCFTS-TSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEG 564
            MA++ + K  + N S+A    P SL+P+S P   KVSRVCFT+  SKY+EGR A E   + +                 ++A E  ++  DR KE A++                 +M                 T ++   AAE  KEGTYKA ETV E+TKEG
Sbjct:    1 MAAIIIAKNAMLNLSKALIPQPPSLFPNSTP---KVSRVCFTTYASKYNEGRYAAEEDEDRASG-------------FSERAKETANETIDRTKERAEKAKERSKEMKEKVKGNAEEMKEKAKGYAHETKESAKGTAQS---AAEKVKEGTYKAAETV-ERTKEG 145          
BLAST of CF810588 vs. P. persica 1.0 peptide
Match: ppa025979m ()

HSP 1 Score: 65.0846 bits (157), Expect = 3.059e-11
Identity = 58/192 (30.21%), Postives = 75/192 (39.06%), Query Frame = 1
Query:   82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHP-KVSRVCFTSTSKYSEGRIAGEGRR-----------------------EVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADR----XXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKA---GETVAEKTKEG 564
            MA +S+ + +VFN SR+FPQ+    SL     KVSRVCFTS SK+SEGR A E  R                        V  ++ A            QKA E+KD   +  +E  ++                                        T +  GT A+ AKEGTYKA    ET  +K KEG
Sbjct:    1 MAVISLARNVVFNLSRSFPQASSSISLRYSSRKVSRVCFTSASKFSEGRNAAEENRGDSRVDSRGSADKKWKNKEREYGSVDVSRKAKEPMEEGLEKSKQKAEEVKDTTKEYAQEAKEKTKGAVEMVAEKAKQGTNRAAETAESAKEKAKDYSYKSEKKTKDMAGTLADKAKEGTYKAAETAETAKKKAKEG 192          
BLAST of CF810588 vs. P. persica 1.0 peptide
Match: ppa024902m ()

HSP 1 Score: 58.5362 bits (140), Expect = 2.863e-9
Identity = 53/160 (33.12%), Postives = 65/160 (40.62%), Query Frame = 1
Query:  103 KTLVFNFSRAFPQSLYPSSL-PLHP--KVSRVCF-TSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVA---EKTKE 561
            K L+FN S++FPQS  PS+L P +   KVSRVCF TS +KYSEG +    R +                     A E+ D+  D   ET +R                                    T E  G+ AE AKEGTYK  E  A   EK KE
Sbjct:    3 KNLIFNPSKSFPQS--PSALSPRYSSRKVSRVCFNTSATKYSEGSVDANNRGK-------------------NPAEEMIDRTKDFTHETKERTKSAAEKAKEGTNRAAKTAVSAKEKAKQYAYETKEKTKEVAGSVAEKAKEGTYKVAEMAASAKEKAKE 141          
BLAST of CF810588 vs. TrEMBL
Match: B9N3H0|B9N3H0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580921 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.910e-10
Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 1
Query:   82 MASMSVPKTLVFNFSRAF---PQSLYPSSLPLHPKVSRVCFTS-TSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEG 564
            MA++ + K  + N S+A    P SL+P+S P   KVSRVCFT+  SKY+EGR A E   + +                 ++A E  ++  DR KE A++                 +M                 T ++   AAE  KEGTYKA ETV E+TKEG
Sbjct:    1 MAAIIIAKNAMLNLSKALIPQPPSLFPNSTP---KVSRVCFTTYASKYNEGRYAAEEDEDRASG-------------FSERAKETANETIDRTKERAEKAKERSKEMKEKVKGNAEEMKEKAKGYAHETKESAKGTAQS---AAEKVKEGTYKAAETV-ERTKEG 145          
BLAST of CF810588 vs. TrEMBL
Match: D7TJB6|D7TJB6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021084001 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.437e-9
Identity = 50/162 (30.86%), Postives = 67/162 (41.36%), Query Frame = 1
Query:   82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHPKVSRVCFTSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEGT 567
            MA+M + +  + N SRAFP++    +L    KVSRVCFTS SK SEGR A E  RE   N                +A+E+ +KA ++ +E+ DR                 DM                   E         KE T    E+ AE+ KEGT
Sbjct:    1 MATMFIARNTMLNLSRAFPRNR-SIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNMEG-------------RASEMTEKAKEKTRESMDRTKEQAEEVKDRAKQRAEDMTEKAKEGTYKATETAEEAKEKAKERTREMKEKTSDMAESAAERAKEGT 148          
BLAST of CF810588 vs. Vitis vinifera peptide
Match: GSVIVT01021084001 (assembled CDS)

HSP 1 Score: 66.2402 bits (160), Expect = 1.174e-11
Identity = 50/162 (30.86%), Postives = 67/162 (41.36%), Query Frame = 1
Query:   82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHPKVSRVCFTSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKEGT 567
            MA+M + +  + N SRAFP++    +L    KVSRVCFTS SK SEGR A E  RE   N                +A+E+ +KA ++ +E+ DR                 DM                   E         KE T    E+ AE+ KEGT
Sbjct:    1 MATMFIARNTMLNLSRAFPRNR-SIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNMEG-------------RASEMTEKAKEKTRESMDRTKEQAEEVKDRAKQRAEDMTEKAKEGTYKATETAEEAKEKAKERTREMKEKTSDMAESAAERAKEGT 148          
BLAST of CF810588 vs. Vitis vinifera peptide
Match: GSVIVT01002813001 (assembled CDS)

HSP 1 Score: 64.6994 bits (156), Expect = 3.414e-11
Identity = 54/160 (33.75%), Postives = 70/160 (43.75%), Query Frame = 1
Query:   82 MASMSVPKTLVFNFSRAFPQSLYPSSLPLHPKVSRVCFTSTSKYSEGRIAGEGRREVSQNKTAWTXXXXXXXXVGQKANEIKDKATDRLKETADRXXXXXXXXXXXXXXXXXDMXXXXXXXXXXXXXXXXXTNEAVGTAAENAKEGTYKAGETVAEKTKE 561
            MA+M + +  + N SR FP++    +L    KVSRVCFTS SK SEGR A E  RE   N                +A+E+ +KA ++ +E+ DR                 DM                         AE AKEGTYKA ET AE+ KE
Sbjct:    1 MATMFIARNTMLNLSREFPRNR-SIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNMEG-------------RASEMTEKAKEKTRESMDRTKEQAEEVKDRAKQRAEDM-------------------------AEKAKEGTYKATET-AEEAKE 120          
The following BLAST results are available for this feature:
BLAST of CF810588 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0011s05400.13.915e-1233.33[more]
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BLAST of CF810588 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
ppa025979m3.059e-1130.21[more]
ppa024902m2.863e-933.13[more]
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BLAST of CF810588 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
B9N3H0|B9N3H0_POPTR4.910e-1033.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TJB6|D7TJB6_VITVI2.437e-930.86Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of CF810588 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2
Match NameE-valueIdentityDescription
GSVIVT010210840011.174e-1130.86assembled CDS[more]
GSVIVT010028130013.414e-1133.75assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..46
score: NAcoord: 59..95
score
NoneNo IPR availableSEGsegsegcoord: 1..23
score
NoneNo IPR availablePANTHERPTHR23241LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATEDcoord: 77..183
score: 5.6
NoneNo IPR availableSEGsegsegcoord: 71..78
score: NAcoord: 101..117
score: NAcoord: 120..136
score: NAcoord: 169..186
score
NoneNo IPR availableSEGsegsegcoord: 79..95
score
IPR004238Late embryogenesis abundant protein, group 4PFAMPF02987LEA_4coord: 81..118
score: 2

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF810588 ID=CF810588; Name=CF810588; organism=Vaccinium corymbosum; type=EST; length=651bp
CAAGAACAAGAAGAATCAGAAAAATTTACGAAAAAACTACTCATACATAC
ACACAGAGAGAAGTGATTCAGAGAGTTAACAATGGCTTCCATGTCTGTAC
CAAAAACCCTTGTTTTTAACTTCTCAAGGGCTTTCCCTCAATCACTCTAC
CCTTCTTCTCTGCCCCTCCATCCCAAAGTCTCTAGGGTTTGCTTCACTTC
TACCTCCAAGTACTCTGAGGGGCGAATTGCAGGGGAAGGAAGAAGAGAAG
TGAGTCAAAACAAAACGGCATGGACGAGTAGTAGTGATTCCGATAGTGAT
GTTGGACAGAAAGCAAACGAGATCAAAGACAAAGCAACAGATAGATTGAA
AGAAACAGCGGACAGAACGAAGGAAAAATCCGAAGAAATGAAAGAGAGCG
CGAAAGAAACGACTGAGGACATGAAGGCGAGAGCGAAAGAGGCGGCCGAG
AAAGGCAAGGAAGGGGCTTACAAGACCAACGAGGCCGTGGGGACGGCTGC
AGAGAATGCCAAGGAAGGGACGTATAAGGCTGGGGAGACGGTAGCGGAGA
AGACAAAGGAAGGGACGAGCAAGGCCGCGGAGGCTGGGGAGACGGTGGCC
GAGAANACGAAGGAAGGAACAACAAGGCGNCGAAGTGGTGGGAAAGGGTT
T
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR004238LEA_4
noIPRunintegrated