CF810948 | GDV

EST Overview


Name	CF810948
Unique Name	CF810948
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	530

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF810948 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s25600.2 ()

HSP 1 Score: 207.608 bits (527), Expect = 3.730e-54
Identity = 102/143 (71.33%), Postives = 116/143 (81.12%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSRTD 431
            +ANTSECIGS DFYRPIAS+AFHAEGE+LAVASGHKLYIW Y++RGE SSPT+VL+T+RSLRAVHFHPHGAPFLLTAEVNDL SSDSS+ RATSPG  RYPPPAV+VAN QS+DR S+ +E                DD+R D
Sbjct:   33 DANTSECIGSRDFYRPIASIAFHAEGELLAVASGHKLYIWHYNKRGEASSPTIVLRTRRSLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTRATSPGYPRYPPPAVFVANGQSNDRVSLASELPLVSFPLLFVPSFSIDDTRVD 175

[Close]

BLAST of CF810948 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s18620.1 ()

HSP 1 Score: 207.608 bits (527), Expect = 3.730e-54
Identity = 103/143 (72.03%), Postives = 114/143 (79.72%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSRTD 431
            +ANTSECIGS DFYRPIAS+AFHAEGE+LAVASGHKLYIW Y++RGE SSPT+VLKT+RSLRAVHFHPHGAPFLLTAEVNDL SSDSS+ RATSPG LRYPPPAV+V N QS D  S+ +E                DDSR D
Sbjct:  171 DANTSECIGSRDFYRPIASIAFHAEGELLAVASGHKLYIWHYNKRGEASSPTIVLKTRRSLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVTNGQSGDCVSLASELPLVSLPFLFVPSFSLDDSRID 313

[Close]

BLAST of CF810948 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s25600.1 ()

HSP 1 Score: 205.297 bits (521), Expect = 1.851e-53
Identity = 98/121 (80.99%), Postives = 111/121 (91.74%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            +ANTSECIGS DFYRPIAS+AFHAEGE+LAVASGHKLYIW Y++RGE SSPT+VL+T+RSLRAVHFHPHGAPFLLTAEVNDL SSDSS+ RATSPG  RYPPPAV+VAN QS+DR S+ +E
Sbjct:  178 DANTSECIGSRDFYRPIASIAFHAEGELLAVASGHKLYIWHYNKRGEASSPTIVLRTRRSLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTRATSPGYPRYPPPAVFVANGQSNDRVSLASE 298

[Close]

BLAST of CF810948 vs. P. persica 1.0 peptide
Match: ppa014954m ()

HSP 1 Score: 192.586 bits (488), Expect = 8.833e-50
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDR 347
            +ANT+ECIGS DF RPIAS+AFHA+GE+LAVASGHKLYIW Y++RGE SSPT+VLKT+RSLRAVHFHPH APFLLTAEVNDL SSDSS+  ATSPG LRYPPP VY+A+  SSDR
Sbjct:  164 DANTAECIGSRDFLRPIASIAFHAQGELLAVASGHKLYIWHYNKRGETSSPTIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTLATSPGYLRYPPPTVYLADAHSSDR 278

[Close]

BLAST of CF810948 vs. P. persica 1.0 peptide
Match: ppa001647m ()

HSP 1 Score: 181.03 bits (458), Expect = 2.660e-46
Identity = 90/119 (75.63%), Postives = 101/119 (84.87%), Query Frame = 3

Query:    9 NTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NTSECIGS DFYRPIAS+AFHA+G++LAVASGHKLYIW Y+  GE SSP +VLKT RSLRAVHFHP  APFLLTAEVNDL SSDSS+  ATSPG L+YP PAV+VANV SS+R S+  E
Sbjct:  171 NTSECIGSRDFYRPIASIAFHAKGDLLAVASGHKLYIWNYN--GERSSPDIVLKTWRSLRAVHFHPQAAPFLLTAEVNDLDSSDSSMTLATSPGYLQYPSPAVFVANVHSSERLSLAAE 287

[Close]

BLAST of CF810948 vs. TrEMBL
Match: B9T5V8|B9T5V8_RICCO (Nucleotide binding protein, putative OS=Ricinus communis GN=RCOM_0996070 PE=4 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.940e-52
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            +ANTSECIGS DFYRPIAS+AFHAEGE+LAVASGHKLY+W Y++RGE SSP +VLKT+RSLRAVHFHPH APFLLTAEVNDL SSDSS+ RATSPG LRYPPPAV+VANVQSSDR S+  E
Sbjct:  177 DANTSECIGSRDFYRPIASIAFHAEGELLAVASGHKLYVWHYNKRGEASSPAIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANVQSSDRVSLAAE 297

[Close]

BLAST of CF810948 vs. TrEMBL
Match: B9IBD4|B9IBD4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243370 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.839e-52
Identity = 103/143 (72.03%), Postives = 114/143 (79.72%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSRTD 431
            +ANTSECIGS DFYRPIAS+AFHAEGE+LAVASGHKLYIW Y++RGE SSPT+VLKT+RSLRAVHFHPHGAPFLLTAEVNDL SSDSS+ RATSPG LRYPPPAV+V N QS D  S+ +E                DDSR D
Sbjct:  150 DANTSECIGSRDFYRPIASIAFHAEGELLAVASGHKLYIWHYNKRGEASSPTIVLKTRRSLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVTNGQSGDCVSLASELPLVSLPFLFVPSFSLDDSRID 292

[Close]

BLAST of CF810948 vs. TrEMBL
Match: D7U397|D7U397_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028455001 PE=4 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.553e-52
Identity = 98/143 (68.53%), Postives = 114/143 (79.72%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSRTD 431
            +ANT+ECIGS DFYRPIAS+AFHA+GE+LAVASGHKL++W Y RRGE SSPT++LKT+RSLRAVHFHPHGAP LLTAEVNDL SSDSS+ RATSPG L YPPPAV++AN+ SSDR  + +E               RDDSR D
Sbjct:  172 DANTAECIGSRDFYRPIASIAFHAKGELLAVASGHKLFVWHYSRRGETSSPTIILKTRRSLRAVHFHPHGAPVLLTAEVNDLDSSDSSMTRATSPGYLHYPPPAVFLANIHSSDRLKLASELHLASLPFSFIPSFARDDSRID 314

[Close]

BLAST of CF810948 vs. TrEMBL
Match: B9GRB1|B9GRB1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409312 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.905e-51
Identity = 98/121 (80.99%), Postives = 111/121 (91.74%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            +ANTSECIGS DFYRPIAS+AFHAEGE+LAVASGHKLYIW Y++RGE SSPT+VL+T+RSLRAVHFHPHGAPFLLTAEVNDL SSDSS+ RATSPG  RYPPPAV+VAN QS+DR S+ +E
Sbjct:  145 DANTSECIGSRDFYRPIASIAFHAEGELLAVASGHKLYIWHYNKRGEASSPTIVLRTRRSLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTRATSPGYPRYPPPAVFVANGQSNDRVSLASE 265

[Close]

BLAST of CF810948 vs. TrEMBL
Match: D7TZ55|D7TZ55_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_172.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001859001 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.693e-50
Identity = 98/141 (69.50%), Postives = 111/141 (78.72%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSR 425
            +A+T+ECIGS DFYRPIAS+AFHA+GE+LAVASGHKLYIW Y+RRGE SSPT+VLKT+RSLRAVHFHPH APFLLTAEVNDL SSDSS+  ATSPG LRYPPP VY+A+  SSDR S+  E               RDD R
Sbjct:  182 DASTAECIGSRDFYRPIASIAFHAQGELLAVASGHKLYIWHYNRRGETSSPTIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTLATSPGYLRYPPPTVYLADAHSSDRSSLADELPLMSLPFFIWPSFARDDGR 322

[Close]

BLAST of CF810948 vs. TrEMBL
Match: D7KDB6|D7KDB6_ARALY (Transducin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470391 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.256e-44
Identity = 84/121 (69.42%), Postives = 101/121 (83.47%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NA T+ECI + DFYRPIAS+AFHA+GE+LAVASGHKL+IW Y++ GE+SSP +VLKT+RSLRAVHFHPHG P LLTAEV D+ SSDS++ RATSPG LRYPPPA++  N QS  R S+  E
Sbjct:  175 NAKTAECIRTHDFYRPIASIAFHADGELLAVASGHKLHIWHYNKIGEDSSPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRATSPGYLRYPPPAIFFTNTQSGSRTSLAAE 295

[Close]

BLAST of CF810948 vs. TrEMBL
Match: B9RWS8|B9RWS8_RICCO (Nucleotide binding protein, putative OS=Ricinus communis GN=RCOM_1023990 PE=4 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.494e-43
Identity = 85/112 (75.89%), Postives = 97/112 (86.61%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQS 338
            NA T+ECIGS +FYRPIAS+AFHA GE+LAVASGHKLYIWQY++RGE SSP  VL+T+RSLRAVHFHPHGAP LLTAEVNDL SS+SS+  ATSPG L YPPP VY+A+  S
Sbjct:  171 NAKTTECIGSHEFYRPIASIAFHAHGELLAVASGHKLYIWQYNKRGETSSPPHVLRTRRSLRAVHFHPHGAPLLLTAEVNDLDSSESSMTLATSPGYLCYPPPTVYLADTHS 282

[Close]

BLAST of CF810948 vs. TrEMBL
Match: Q94C94|Q94C94_ARATH (Putative uncharacterized protein At1g04140 OS=Arabidopsis thaliana GN=At1g04140 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.257e-43
Identity = 81/121 (66.94%), Postives = 99/121 (81.82%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NA T ECI + DFYRPIAS+AFHA GE+LAVASGHKL+IW Y++ G++S+P +VLKT+RSLRAVHFHPHG P LLTAEV D+ SSDS++ R+TSPG LRYPPPA++  N QS  R S+  E
Sbjct:  174 NAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFFTNTQSGSRTSLAAE 294

[Close]

BLAST of CF810948 vs. TrEMBL
Match: Q0WLT3|Q0WLT3_ARATH (Putative uncharacterized protein At1g04140 (Fragment) OS=Arabidopsis thaliana GN=At1g04140 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.257e-43
Identity = 81/121 (66.94%), Postives = 99/121 (81.82%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NA T ECI + DFYRPIAS+AFHA GE+LAVASGHKL+IW Y++ G++S+P +VLKT+RSLRAVHFHPHG P LLTAEV D+ SSDS++ R+TSPG LRYPPPA++  N QS  R S+  E
Sbjct:   54 NAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFFTNTQSGSRTSLAAE 174

[Close]

BLAST of CF810948 vs. TrEMBL
Match: O64493|O64493_ARATH (F20D22.9 protein OS=Arabidopsis thaliana GN=F20D22.9 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.257e-43
Identity = 81/121 (66.94%), Postives = 99/121 (81.82%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NA T ECI + DFYRPIAS+AFHA GE+LAVASGHKL+IW Y++ G++S+P +VLKT+RSLRAVHFHPHG P LLTAEV D+ SSDS++ R+TSPG LRYPPPA++  N QS  R S+  E
Sbjct:  177 NAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFFTNTQSGSRTSLAAE 297

[Close]

BLAST of CF810948 vs. Vitis vinifera peptide
Match: GSVIVT01028455001 (assembled CDS)

HSP 1 Score: 206.453 bits (524), Expect = 5.074e-54
Identity = 98/143 (68.53%), Postives = 114/143 (79.72%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSRTD 431
            +ANT+ECIGS DFYRPIAS+AFHA+GE+LAVASGHKL++W Y RRGE SSPT++LKT+RSLRAVHFHPHGAP LLTAEVNDL SSDSS+ RATSPG L YPPPAV++AN+ SSDR  + +E               RDDSR D
Sbjct:  172 DANTAECIGSRDFYRPIASIAFHAKGELLAVASGHKLFVWHYSRRGETSSPTIILKTRRSLRAVHFHPHGAPVLLTAEVNDLDSSDSSMTRATSPGYLHYPPPAVFLANIHSSDRLKLASELHLASLPFSFIPSFARDDSRID 314

[Close]

BLAST of CF810948 vs. Vitis vinifera peptide
Match: GSVIVT01001859001 (assembled CDS)

HSP 1 Score: 200.675 bits (509), Expect = 2.784e-52
Identity = 98/141 (69.50%), Postives = 111/141 (78.72%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTEXXXXXXXXXXXXXXXRDDSR 425
            +A+T+ECIGS DFYRPIAS+AFHA+GE+LAVASGHKLYIW Y+RRGE SSPT+VLKT+RSLRAVHFHPH APFLLTAEVNDL SSDSS+  ATSPG LRYPPP VY+A+  SSDR S+  E               RDD R
Sbjct:  182 DASTAECIGSRDFYRPIASIAFHAQGELLAVASGHKLYIWHYNRRGETSSPTIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDSSMTLATSPGYLRYPPPTVYLADAHSSDRSSLADELPLMSLPFFIWPSFARDDGR 322

[Close]

BLAST of CF810948 vs. TAIR peptide
Match: AT1G04140.2 (| Symbols: | Transducin family protein / WD-40 repeat family protein | chr1:1075992-1080321 REVERSE LENGTH=793)

HSP 1 Score: 176.792 bits (447), Expect = 6.127e-45
Identity = 81/121 (66.94%), Postives = 99/121 (81.82%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NA T ECI + DFYRPIAS+AFHA GE+LAVASGHKL+IW Y++ G++S+P +VLKT+RSLRAVHFHPHG P LLTAEV D+ SSDS++ R+TSPG LRYPPPA++  N QS  R S+  E
Sbjct:  174 NAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFFTNTQSGSRTSLAAE 294

[Close]

BLAST of CF810948 vs. TAIR peptide
Match: AT1G04140.1 (| Symbols: | Transducin family protein / WD-40 repeat family protein | chr1:1075984-1080321 REVERSE LENGTH=790)

HSP 1 Score: 176.792 bits (447), Expect = 6.127e-45
Identity = 81/121 (66.94%), Postives = 99/121 (81.82%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSSDRFSMTTE 365
            NA T ECI + DFYRPIAS+AFHA GE+LAVASGHKL+IW Y++ G++S+P +VLKT+RSLRAVHFHPHG P LLTAEV D+ SSDS++ R+TSPG LRYPPPA++  N QS  R S+  E
Sbjct:  174 NAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFFTNTQSGSRTSLAAE 294

[Close]

BLAST of CF810948 vs. TAIR peptide
Match: AT5G43930.3 (| Symbols: | Transducin family protein / WD-40 repeat family protein | chr5:17677047-17680577 FORWARD LENGTH=726)

HSP 1 Score: 172.555 bits (436), Expect = 1.156e-43
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSS 341
            N  TSECI S  FYRPIAS+AFHAEGE+LAVASGHKL++W Y+RRGE SSPTVVLKT+RSLRAVHFHPHGAP LLTAEVN++ S DSS+ RATS G LRYPPPA+   + +S+
Sbjct:  177 NTTTSECIRSHLFYRPIASIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVLKTRRSLRAVHFHPHGAPLLLTAEVNEIDSLDSSMSRATSMGYLRYPPPAILFTSTESN 289

[Close]

BLAST of CF810948 vs. TAIR peptide
Match: AT5G43930.2 (| Symbols: | Transducin family protein / WD-40 repeat family protein | chr5:17677047-17680577 FORWARD LENGTH=726)

HSP 1 Score: 172.555 bits (436), Expect = 1.156e-43
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSS 341
            N  TSECI S  FYRPIAS+AFHAEGE+LAVASGHKL++W Y+RRGE SSPTVVLKT+RSLRAVHFHPHGAP LLTAEVN++ S DSS+ RATS G LRYPPPA+   + +S+
Sbjct:  177 NTTTSECIRSHLFYRPIASIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVLKTRRSLRAVHFHPHGAPLLLTAEVNEIDSLDSSMSRATSMGYLRYPPPAILFTSTESN 289

[Close]

BLAST of CF810948 vs. TAIR peptide
Match: AT5G43930.1 (| Symbols: | Transducin family protein / WD-40 repeat family protein | chr5:17677047-17680577 FORWARD LENGTH=726)

HSP 1 Score: 172.555 bits (436), Expect = 1.156e-43
Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAEVNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSS 341
            N  TSECI S  FYRPIAS+AFHAEGE+LAVASGHKL++W Y+RRGE SSPTVVLKT+RSLRAVHFHPHGAP LLTAEVN++ S DSS+ RATS G LRYPPPA+   + +S+
Sbjct:  177 NTTTSECIRSHLFYRPIASIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVLKTRRSLRAVHFHPHGAPLLLTAEVNEIDSLDSSMSRATSMGYLRYPPPAILFTSTESN 289

[Close]

BLAST of CF810948 vs. TAIR peptide
Match: AT5G43930.4 (| Symbols: | Transducin family protein / WD-40 repeat family protein | chr5:17677047-17680577 FORWARD LENGTH=752)

HSP 1 Score: 167.548 bits (423), Expect = 3.717e-42
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 3

Query:    3 NANTSECIGSLDFYRPIASLAFHAEGEVLAVASGHKLYIWQYDRRGENSSPTVVLKTKRSLRAVHFHPHGAPFLLTAE--VNDLGSSDSSIIRATSPGSLRYPPPAVYVANVQSS 341
            N  TSECI S  FYRPIAS+AFHAEGE+LAVASGHKL++W Y+RRGE SSPTVVLKT+RSLRAVHFHPHGAP LLTAE  VN++ S DSS+ RATS G LRYPPPA+   + +S+
Sbjct:  201 NTTTSECIRSHLFYRPIASIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVLKTRRSLRAVHFHPHGAPLLLTAEWQVNEIDSLDSSMSRATSMGYLRYPPPAILFTSTESN 315

The following BLAST results are available for this feature:

BLAST of CF810948 vs. Populus trichocarpa peptide v2.0
BLAST of CF810948 vs. P. persica 1.0 peptide
BLAST of CF810948 vs. TrEMBL
BLAST of CF810948 vs. Vitis vinifera peptide
BLAST of CF810948 vs. TAIR peptide

BLAST of CF810948 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0002s25600.2	3.730e-54	71.33	[more]
POPTR_0014s18620.1	3.730e-54	72.03	[more]
POPTR_0002s25600.1	1.851e-53	80.99	[more]

BLAST of CF810948 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa014954m	8.833e-50	79.13		[more]
ppa001647m	2.660e-46	75.63		[more]

BLAST of CF810948 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9T5V8\|B9T5V8_RICCO	2.940e-52	81.82	Nucleotide binding protein, putative OS=Ricinus co...	[more]
B9IBD4\|B9IBD4_POPTR	3.839e-52	72.03	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7U397\|D7U397_VITVI	8.553e-52	68.53	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9GRB1\|B9GRB1_POPTR	1.905e-51	80.99	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7TZ55\|D7TZ55_VITVI	4.693e-50	69.50	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7KDB6\|D7KDB6_ARALY	2.256e-44	69.42	Transducin family protein OS=Arabidopsis lyrata su...	[more]
B9RWS8\|B9RWS8_RICCO	2.494e-43	75.89	Nucleotide binding protein, putative OS=Ricinus co...	[more]
Q94C94\|Q94C94_ARATH	7.257e-43	66.94	Putative uncharacterized protein At1g04140 OS=Arab...	[more]
Q0WLT3\|Q0WLT3_ARATH	7.257e-43	66.94	Putative uncharacterized protein At1g04140 (Fragme...	[more]
O64493\|O64493_ARATH	7.257e-43	66.94	F20D22.9 protein OS=Arabidopsis thaliana GN=F20D22...	[more]

BLAST of CF810948 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01028455001	5.074e-54	68.53	assembled CDS	[more]
GSVIVT01001859001	2.784e-52	69.50	assembled CDS	[more]

BLAST of CF810948 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT1G04140.2	6.127e-45	66.94	\| Symbols: \| Transducin family protein / WD-40 re...	[more]
AT1G04140.1	6.127e-45	66.94	\| Symbols: \| Transducin family protein / WD-40 re...	[more]
AT5G43930.3	1.156e-43	73.45	\| Symbols: \| Transducin family protein / WD-40 re...	[more]
AT5G43930.2	1.156e-43	73.45	\| Symbols: \| Transducin family protein / WD-40 re...	[more]
AT5G43930.1	1.156e-43	73.45	\| Symbols: \| Transducin family protein / WD-40 re...	[more]
AT5G43930.4	3.717e-42	72.17	\| Symbols: \| Transducin family protein / WD-40 re...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10	no description	coord: 2..78 score: 2.6
None	No IPR available	PANTHER	PTHR22874	FAMILY NOT NAMED	coord: 1..141 score: 4.3
None	No IPR available	PANTHER	PTHR22874:SF1	SUBFAMILY NOT NAMED	coord: 1..141 score: 4.3
None	No IPR available	SEG	seg	seg	coord: 122..136 score
None	No IPR available	SUPERFAMILY	101908	Putative isomerase YbhE	coord: 7..70 score: 1.7
None	No IPR available	SEG	seg	seg	coord: 42..55 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF810948 ID=CF810948; Name=CF810948; organism=Vaccinium corymbosum; type=EST; length=530bp
GGAATGCAAACACATCAGAGTGCATCGGATCTCTAGATTTTTACCGTCCT
ATTGCCTCCCTTGCTTTTCATGCTGAAGGGGAAGTCCTTGCTGTTGCTTC
AGGTCATAAGCTATATATATGGCAATATGATAGGAGAGGGGAAAATTCCT
CACCGACTGTTGTACTGAAGACAAAGCGTTCACTGCGGGCTGTGCATTTT
CATCCGCACGGTGCTCCCTTTCTCTTAACTGCTGAGGTTAATGATCTTGG
CTCTTCAGATTCCTCAATCATAAGGGCAACATCTCCAGGATCTTTGCGTT
ATCCTCCTCCTGCTGTTTATGTAGCAAATGTGCAATCAAGTGATCGTTTT
AGTATGACAACTGAATTGCCTTTGATGTCTTTACCTTTATTGTTCTTGCC
TTCTTTTTCAAGAGATGATTCAAGGACAGATCCACGACTTGGNAAACAGA
CCAGTTGGTCCAAGTCATTTAGGAGTGGGATCTTCTTCTTCAATGCAGTT
TCGGGGNGGATGTAAAATGCAATANAGCAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
noIPR	unintegrated