CF811024

EST Overview
NameCF811024
Unique NameCF811024
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length675
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
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BLAST of CF811024 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s17320.1 ()

HSP 1 Score: 52.373 bits (124), Expect = 3.037e-7
Identity = 27/41 (65.85%), Postives = 29/41 (70.73%), Query Frame = 3 
Query:    6 P*GAASGAIFGHLLTTSIAILGGGFLANIISEKLAGPNLSH 128
            P G A+GAI GHL+ TSIAILGG FLAN ISEKL      H
Sbjct:  214 PWGVATGAIAGHLVATSIAILGGAFLANYISEKLVRAATMH 254
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BLAST of CF811024 vs. Vitis vinifera peptide
Match: GSVIVT01029035001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 6.370e-8
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 3 
Query:    6 P*GAASGAIFGHLLTTSIAILGGGFLANIISEKLAG 113
            P G ASGAI GHL  T+IAILGG FLAN ISEKL G
Sbjct:  300 PWGVASGAIAGHLFATTIAILGGAFLANYISEKLVG 335
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BLAST of CF811024 vs. TAIR peptide
Match: AT4G13590.2 (| Symbols: | Uncharacterized protein family (UPF0016) | chr4:7901369-7903792 REVERSE LENGTH=359)

HSP 1 Score: 51.6026 bits (122), Expect = 4.561e-7
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 3 
Query:    6 P*GAASGAIFGHLLTTSIAILGGGFLANIISEKLAG 113
            P G ASGAI GHL+ T +AI+GG FLAN ISEKL G
Sbjct:  305 PLGVASGAIAGHLVATVLAIMGGAFLANYISEKLVG 340
[Close]
BLAST of CF811024 vs. TAIR peptide
Match: AT4G13590.1 (| Symbols: | Uncharacterized protein family (UPF0016) | chr4:7901369-7903792 REVERSE LENGTH=359)

HSP 1 Score: 51.6026 bits (122), Expect = 4.561e-7
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 3 
Query:    6 P*GAASGAIFGHLLTTSIAILGGGFLANIISEKLAG 113
            P G ASGAI GHL+ T +AI+GG FLAN ISEKL G
Sbjct:  305 PLGVASGAIAGHLVATVLAIMGGAFLANYISEKLVG 340
The following BLAST results are available for this feature:
BLAST of CF811024 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0003s17320.13.037e-765.85[more]
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BLAST of CF811024 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010290350016.370e-875.00assembled CDS[more]
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BLAST of CF811024 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G13590.24.561e-769.44| Symbols: | Uncharacterized protein family (UPF0... [more]
AT4G13590.14.561e-769.44| Symbols: | Uncharacterized protein family (UPF0... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..30
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811024 ID=CF811024; Name=CF811024; organism=Vaccinium corymbosum; type=EST; length=675bp
AGTGTCCTTAGGGTGCGGCAAGTGGAGCAATTTTTGGACATCTGCTCACA
ACATCAATTGCCATTCTTGGGGGAGGATTTCTAGCCAACATCATCTCTGA
AAAATTGGCAGGACCCAATCTCTCCCACTTTCACTCTCCCAAATTCGCAA
TCTGGTCAGCTACTTGGGTGGACTGGAGAACTATTTCTGGTAGCGGTGTA
GCCACATTTCGGTTTTCAAGAAAAAGAAAGCTGTTGTAGATGAAGACAAC
TTGGAATTAGTTACTAGAGATAGACACAACAAACCCCCCCCCCCCCCTGA
AGACGGCAGATGCAGATTCTGTATTATTTTAAGCACCGTGCGATTAGTTC
CCAATTAATGTTCTTGTGGTCATAAATCTGTATGATAGTGAGTTTTACAA
TAAAAAAATTGTAGATTTGTCAAACAATAAATTCATTATTGTGGATGTCT
GAGCCTGAAATTAATTGGCTTTACTTTTCAAGTTTTGATCCCATTTTGAC
TGCGTACTACTCCCTCCGTCTCTAAATAAGTGTTCATTTTCACTTTTTGA
CACTATTTTAATTTGTCTATGACTTTCAATCTATAATGNACTATACACTT
GTAAGACTATTCTGAAAACTANTCAATGATGGCCCTCCATGGATTCTCCT
ATATANCTGCAGCTAAGTTGCAAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated