CF811378 | GDV

EST Overview


Name	CF811378
Unique Name	CF811378
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	575

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2540_XENLA (Solute carrier family 25 member 40 OS=Xenopus laevis GN=slc25a40 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.186e-10
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQ----GVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLN 240
            AA +T P DVVKT+ Q +     V       SSS   +++ IV +NG+GGL  G VPR++  APA AI  STYE  K+FF+ LN
Sbjct:  250 AAIVTLPFDVVKTRRQVEVGELEVFTYSHKRSSSTWKLMSAIVAENGFGGLFAGLVPRLIKVAPACAIMISTYEFGKSFFRKLN 333

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2540_XENTR (Solute carrier family 25 member 40 OS=Xenopus tropicalis GN=slc25a40 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.359e-10
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFS-----SSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLN 240
            AA +T P DVVKT+ Q + V   + F+     SSS   ++  IV +NG+GGL  G +PR++  APA AI  STYE  K+FF+ LN
Sbjct:  250 AAIVTLPFDVVKTRRQVE-VGELEMFTYSQKRSSSTWKLMRAIVIENGFGGLFAGLIPRLIKVAPACAIMISTYEFGKSFFRKLN 333

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2540_BOVIN (Solute carrier family 25 member 40 OS=Bos taurus GN=SLC25A40 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.417e-9
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQ-GVCGCDRFS---SSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGR 246
            AA +T P DVVKTQ Q Q  +    + S     S   ++  IV KNG+ GL  G +PR++  APA A+  STYE  K+FFQ  N +
Sbjct:  249 AAVVTLPFDVVKTQKQTQLWIYESQKISMPLQMSTWTIMKNIVAKNGFSGLFTGLIPRLIKIAPACAVMISTYEFGKSFFQKQNAQ 334

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2540_HUMAN (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.199e-8
Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQ-GVCGCDRFSSS---SIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGR 246
            AA  T P DVVKTQ Q Q       + S     S   ++  IV KNG+ GL  G +PR++  APA AI  STYE  K FFQ  N R
Sbjct:  249 AAVATLPFDVVKTQKQTQLWTYESHKISMPLHMSTWIIMKNIVAKNGFSGLFSGLIPRLIKIAPACAIMISTYEFGKAFFQKQNVR 334

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: MRS3_YEAST (Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae GN=MRS3 PE=1 SV=4)

HSP 1 Score: 59.6918 bits (143), Expect = 1.199e-8
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 1

Query:    4 AALTTPLDVVKTQLQCQG--------VCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTF 225
            AA+TTPLD +KT LQ +G        +   D FS ++     + I Q  G+ G  RGW PR++ + PA AI W+ YE AK F
Sbjct:  234 AAITTPLDCIKTVLQIRGSQTVSLEIMRKADTFSKAA-----SAIYQVYGWKGFWRGWKPRIVANMPATAISWTAYECAKHF 310

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2540_DANRE (Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.672e-8
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQ-GVCGCDRFS---SSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLN 240
            A+ +T P DVVKT+ Q + G     + S   SSS   V+  IV +NG  GL  G++PR++  APA AI  STYE  K FF+  N
Sbjct:  250 ASIITLPFDVVKTKRQVEMGELQTMKLSTQVSSSTCSVMKRIVAENGVSGLFAGFMPRLIKVAPACAIMISTYEFGKAFFRKYN 333

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2539_DANRE (Solute carrier family 25 member 39 OS=Danio rerio GN=slc25a39 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.672e-8
Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQ-----GVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLN 240
            AA LT P DVVKT+ Q Q      +        SS  +++  I    GY GL  G++PR++  APA A+  STYE  KTFFQ+ N
Sbjct:  267 AAVLTLPFDVVKTRRQIQLGEMEALGAVSMKKPSSTWNMMRNIWIDMGYKGLFAGFLPRVIKVAPACAVMISTYEFGKTFFQERN 351

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: MFRN_DICDI (Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.557e-8
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQ------------DVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAK 219
            AAA T P DVVKT+LQ Q     D  +SS+I             D + TI  + G  G +RG  PRM+FH+ ++AI WS YE  K
Sbjct:  223 AAAFTNPFDVVKTRLQTQS----DFIASSTINSAKSIKRYGGMMDAMKTIWIEEGMDGYLRGMKPRMVFHSMSSAIVWSVYEYFK 303

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: MFRN_CAEEL (Mitoferrin OS=Caenorhabditis elegans GN=W02B12.9 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.015e-7
Identity = 35/95 (36.84%), Postives = 44/95 (46.32%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCD----------RFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNS 255
            AAALTTP+D VKT L  Q     D          R+    I D + TI  + G  G   G   R++F  PA A+ WS YE  K F     G ++S
Sbjct:  219 AAALTTPMDCVKTVLNTQQAAEADPANRRIFLQARYRYRGISDAVRTIYSQRGLSGFSCGLQARVIFQVPATALSWSVYELFK-FMLSFEGGHSS 312

[Close]

BLAST of CF811378 vs. DB:swissprot:display
Match: S2540_RAT (Solute carrier family 25 member 40 OS=Rattus norvegicus GN=Slc25a40 PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 2.262e-7
Identity = 34/84 (40.48%), Postives = 41/84 (48.81%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQ----GVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLN 240
            AA  T P DVVKTQ Q Q      C        S   ++  IV   G+ GL  G +PR++   PA AI  S+YE  K FFQ  N
Sbjct:  250 AAVATLPFDVVKTQKQTQLWTHEYCKFPEPLDMSTWSIMKNIVADRGFSGLFTGLIPRLVKIVPACAIMISSYELGKGFFQQQN 333

[Close]

BLAST of CF811378 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s08130.1 ()

HSP 1 Score: 147.517 bits (371), Expect = 5.269e-36
Identity = 68/85 (80.00%), Postives = 77/85 (90.59%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNS 255
            AAA+TTPLDVVKTQLQCQGVCGCDRF S SI DVI TIV+K+GY GL+RGW+PRMLFHAPAAAI WSTYEA+K+FFQ+LN  +NS
Sbjct:  241 AAAITTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLIRGWIPRMLFHAPAAAISWSTYEASKSFFQELNDNSNS 325

[Close]

BLAST of CF811378 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s13300.1 ()

HSP 1 Score: 143.665 bits (361), Expect = 7.608e-35
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNG 243
            AA +TTPLDVVKTQLQCQGVCGCDRFSSSSI +VI  IV+K+GY GLMRGW+PRMLFHAPAAAICWSTYEA+K FF  LNG
Sbjct:  245 AAIVTTPLDVVKTQLQCQGVCGCDRFSSSSIGNVIKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWSTYEASKDFFHRLNG 325

[Close]

BLAST of CF811378 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s28920.1 ()

HSP 1 Score: 143.28 bits (360), Expect = 9.936e-35
Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNS 255
            AAA+TTPLDVVKTQLQCQGVCGCDRF S SI+DVI  I++K+GY GLMRGW+PRMLFH+PAAAI WSTYEA+K+FF  LN  +NS
Sbjct:  241 AAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIKAILEKDGYRGLMRGWIPRMLFHSPAAAISWSTYEASKSFFHKLNSNSNS 325

[Close]

BLAST of CF811378 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s06120.1 ()

HSP 1 Score: 51.9878 bits (123), Expect = 3.013e-7
Identity = 25/79 (31.65%), Postives = 42/79 (53.16%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDL 237
            ++  T PLD+V+ + Q +G  G  R  ++ +  +   I+Q  G+ GL RG +P      P  +IC++TYE  K    D+
Sbjct:  255 SSTATFPLDLVRRRKQLEGAGGRARVYTTGLLGIFKHIIQTEGFRGLYRGIMPEYYKVVPGVSICFTTYETLKLLLADV 333

[Close]

BLAST of CF811378 vs. P. persica 1.0 peptide
Match: ppa008598m ()

HSP 1 Score: 150.984 bits (380), Expect = 3.427e-37
Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNG 243
            AAA+TTPLDVVKTQLQCQGVCGCDRFSSSSI DVI ++V K+GY GLMRGWVPRMLFHAPAAAICWSTYEA+K FFQ+LNG
Sbjct:  240 AAAVTTPLDVVKTQLQCQGVCGCDRFSSSSIGDVIRSLVTKDGYRGLMRGWVPRMLFHAPAAAICWSTYEASKNFFQELNG 320

[Close]

BLAST of CF811378 vs. P. persica 1.0 peptide
Match: ppa008403m ()

HSP 1 Score: 148.288 bits (373), Expect = 2.222e-36
Identity = 66/86 (76.74%), Postives = 78/86 (90.70%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            A+ +TTPLDVVKTQLQCQG+CGCDRF S SI+DV  TIV+K+GY GL+RGW PRMLFHAPAAAICWSTYEA+KTFFQ+LNG +++S
Sbjct:  244 ASMVTTPLDVVKTQLQCQGICGCDRFKSGSIRDVFRTIVRKDGYKGLVRGWAPRMLFHAPAAAICWSTYEASKTFFQELNGSSSNS 329

[Close]

BLAST of CF811378 vs. P. persica 1.0 peptide
Match: ppa007881m ()

HSP 1 Score: 51.2174 bits (121), Expect = 3.696e-7
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQD-LNGRNNSSV 261
            +A LTTPLDVVKT+LQ QG         +   D I +I    G  G+ RG +PR+ ++ PA+A+ +   E  +  F + L+  N+  V
Sbjct:  254 SAYLTTPLDVVKTRLQIQG----STLRYNGWLDAIRSIWMVEGAHGMFRGSIPRITWYIPASALTFMAVEFLRDHFNEGLSNPNSQDV 337

[Close]

BLAST of CF811378 vs. TrEMBL
Match: D7SR69|D7SR69_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_58.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030290001 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.483e-37
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNN 252
            AAA+TTPLDVVKTQLQCQGVCGCDRFSS SI+DV+ TIV+K+GYGGLMRGW+PRMLFHAPAAAICWSTYEAAK FF++ NGR+N
Sbjct:   27 AAAVTTPLDVVKTQLQCQGVCGCDRFSSGSIRDVLETIVKKDGYGGLMRGWIPRMLFHAPAAAICWSTYEAAKAFFEEQNGRSN 110

[Close]

BLAST of CF811378 vs. TrEMBL
Match: O82049|O82049_RIBNI (Mitochondrial carrier protein OS=Ribes nigrum GN=prib7 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.647e-37
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AA +TTPLDVVKTQLQCQGVCGCDRFSSSSIQDVI +IV+KNGY GLMRGW+PRMLFHAPAAAICWSTYEA+KTFFQ LN  N++S
Sbjct:  201 AAVVTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIGSIVKKNGYVGLMRGWIPRMLFHAPAAAICWSTYEASKTFFQKLNESNSNS 286

[Close]

BLAST of CF811378 vs. TrEMBL
Match: B9RRI4|B9RRI4_RICCO (Mitochondrial carrier protein, putative OS=Ricinus communis GN=RCOM_1402800 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.460e-35
Identity = 70/85 (82.35%), Postives = 76/85 (89.41%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNS 255
            AAA+TTPLDVVKTQLQCQGVCGCDRF S SI DVI  IV+K+GY GLMRGW+PRMLFHAPAAAICWSTYEAAK FFQ+LN  +NS
Sbjct:  238 AAAITTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIRAIVEKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAAKVFFQELNDNSNS 322

[Close]

BLAST of CF811378 vs. TrEMBL
Match: Q8LEH2|Q8LEH2_ARATH (Putative mitochondrial carrier protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.157e-35
Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AAA+TTPLDVVKTQLQCQGVCGCDRF SSSI DV  TIV+K+GY GL RGW+PRMLFHAPAAAICWSTYE  K+FFQDLNG  N++
Sbjct:  246 AAAVTTPLDVVKTQLQCQGVCGCDRFKSSSISDVFRTIVKKDGYRGLARGWLPRMLFHAPAAAICWSTYETVKSFFQDLNGEANAA 331

[Close]

BLAST of CF811378 vs. TrEMBL
Match: O64731|O64731_ARATH (Putative mitochondrial carrier protein OS=Arabidopsis thaliana GN=At2g30160 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.157e-35
Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AAA+TTPLDVVKTQLQCQGVCGCDRF SSSI DV  TIV+K+GY GL RGW+PRMLFHAPAAAICWSTYE  K+FFQDLNG  N++
Sbjct:  246 AAAVTTPLDVVKTQLQCQGVCGCDRFKSSSISDVFRTIVKKDGYRGLARGWLPRMLFHAPAAAICWSTYETVKSFFQDLNGEANAA 331

[Close]

BLAST of CF811378 vs. TrEMBL
Match: D7SJQ4|D7SJQ4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024642001 PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.059e-34
Identity = 66/85 (77.65%), Postives = 78/85 (91.76%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNS 255
            AA LTTPLDVVKTQLQCQG+CGCDR+SS SI+DV+ TIV+K+GY GLMRGW+PRMLFHAPAAAICWSTYEA K+ FQ+LN +++S
Sbjct:  239 AALLTTPLDVVKTQLQCQGICGCDRYSSGSIRDVLRTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAWKSIFQELNAKSDS 323

[Close]

BLAST of CF811378 vs. TrEMBL
Match: D7KGY2|D7KGY2_ARALY (Mitochondrial substrate carrier family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470726 PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.059e-34
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AAA+TTPLDVVKTQLQCQGVCGCDRF+S SI  V+ TIV+K+GY GL+RGW+PRMLFHAPAAAICWSTYE  K+FFQD NG +N++
Sbjct:  241 AAAVTTPLDVVKTQLQCQGVCGCDRFTSGSISHVLRTIVKKDGYRGLLRGWLPRMLFHAPAAAICWSTYEGVKSFFQDFNGDSNTA 326

[Close]

BLAST of CF811378 vs. TrEMBL
Match: D7LBK8|D7LBK8_ARALY (Mitochondrial substrate carrier family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481927 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.033e-33
Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNG 243
            AAA+TTPLDVVKTQLQCQGVCGCDRF S SI DV  TIV+K+GY GL RGW+PRMLFHAPAAAICWSTYE  K+FFQDLNG
Sbjct:  248 AAAVTTPLDVVKTQLQCQGVCGCDRFKSGSISDVFRTIVKKDGYRGLARGWLPRMLFHAPAAAICWSTYETVKSFFQDLNG 328

[Close]

BLAST of CF811378 vs. TrEMBL
Match: Q8L6Z2|Q8L6Z2_ARATH (At1g07030 OS=Arabidopsis thaliana GN=At1g07030 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.302e-33
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AAA+TTPLDVVKTQLQCQGVCGCDRF+SSSI  V+ TIV+K+GY GL+RGW+PRMLFHAPAAAICWSTYE  K+FFQD N  +N++
Sbjct:  241 AAAVTTPLDVVKTQLQCQGVCGCDRFTSSSISHVLRTIVKKDGYRGLLRGWLPRMLFHAPAAAICWSTYEGVKSFFQDFNVDSNTA 326

[Close]

BLAST of CF811378 vs. TrEMBL
Match: B9IGH0|B9IGH0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_577051 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.749e-33
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNG 243
            AA +TTPLDVVKTQLQCQGVCGCDRFSSSSI +VI  IV+K+GY GLMRGW+PRMLFHAPAAAICWSTYEA+K FF  LNG
Sbjct:  245 AAIVTTPLDVVKTQLQCQGVCGCDRFSSSSIGNVIKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWSTYEASKDFFHRLNG 325

[Close]

BLAST of CF811378 vs. Vitis vinifera peptide
Match: GSVIVT01030290001 (assembled CDS)

HSP 1 Score: 157.918 bits (398), Expect = 2.402e-39
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNN 252
            AAA+TTPLDVVKTQLQCQGVCGCDRFSS SI+DV+ TIV+K+GYGGLMRGW+PRMLFHAPAAAICWSTYEAAK FF++ NGR+N
Sbjct:   27 AAAVTTPLDVVKTQLQCQGVCGCDRFSSGSIRDVLETIVKKDGYGGLMRGWIPRMLFHAPAAAICWSTYEAAKAFFEEQNGRSN 110

[Close]

BLAST of CF811378 vs. Vitis vinifera peptide
Match: GSVIVT01024642001 (assembled CDS)

HSP 1 Score: 147.517 bits (371), Expect = 3.247e-36
Identity = 66/85 (77.65%), Postives = 78/85 (91.76%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNS 255
            AA LTTPLDVVKTQLQCQG+CGCDR+SS SI+DV+ TIV+K+GY GLMRGW+PRMLFHAPAAAICWSTYEA K+ FQ+LN +++S
Sbjct:  239 AALLTTPLDVVKTQLQCQGICGCDRYSSGSIRDVLRTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAWKSIFQELNAKSDS 323

[Close]

BLAST of CF811378 vs. Vitis vinifera peptide
Match: GSVIVT01007869001 (assembled CDS)

HSP 1 Score: 54.6842 bits (130), Expect = 2.864e-8
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSSV 261
            +A LTTPLDV+KT+LQ QG       S +   D I  I    G  G+ RG +PR++++ PA+A+ +   E  +  F    G NN+S+
Sbjct:  228 SAYLTTPLDVIKTRLQVQG----SNSSYNGWLDAIHRIWMTEGVKGMFRGSIPRIVWYIPASALTFMAVEFLRDHFN--GGLNNNSM 308

[Close]

BLAST of CF811378 vs. TAIR peptide
Match: AT2G30160.1 (| Symbols: | Mitochondrial substrate carrier family protein | chr2:12878016-12879377 FORWARD LENGTH=331)

HSP 1 Score: 150.599 bits (379), Expect = 5.488e-37
Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AAA+TTPLDVVKTQLQCQGVCGCDRF SSSI DV  TIV+K+GY GL RGW+PRMLFHAPAAAICWSTYE  K+FFQDLNG  N++
Sbjct:  246 AAAVTTPLDVVKTQLQCQGVCGCDRFKSSSISDVFRTIVKKDGYRGLARGWLPRMLFHAPAAAICWSTYETVKSFFQDLNGEANAA 331

[Close]

BLAST of CF811378 vs. TAIR peptide
Match: AT1G07030.1 (| Symbols: | Mitochondrial substrate carrier family protein | chr1:2158631-2160524 REVERSE LENGTH=326)

HSP 1 Score: 145.591 bits (366), Expect = 1.765e-35
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSS 258
            AAA+TTPLDVVKTQLQCQGVCGCDRF+SSSI  V+ TIV+K+GY GL+RGW+PRMLFHAPAAAICWSTYE  K+FFQD N  +N++
Sbjct:  241 AAAVTTPLDVVKTQLQCQGVCGCDRFTSSSISHVLRTIVKKDGYRGLLRGWLPRMLFHAPAAAICWSTYEGVKSFFQDFNVDSNTA 326

[Close]

BLAST of CF811378 vs. TAIR peptide
Match: AT1G74240.1 (| Symbols: | Mitochondrial substrate carrier family protein | chr1:27917437-27919987 FORWARD LENGTH=364)

HSP 1 Score: 58.151 bits (139), Expect = 3.707e-9
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLNGRNNSSV 261
            +A LTTPLDVVKT+LQ QG             D +  I +K G  G  RG VPR++++ PA+A+ +   E  +  F++ +  NN+ V
Sbjct:  265 SAYLTTPLDVVKTRLQVQG----STIKYKGWLDAVGQIWRKEGPQGFFRGSVPRVMWYLPASALTFMAVEFLRDNFREKSNNNNNVV 347

[Close]

BLAST of CF811378 vs. TAIR peptide
Match: AT3G55640.1 (| Symbols: | Mitochondrial substrate carrier family protein | chr3:20640048-20642411 FORWARD LENGTH=332)

HSP 1 Score: 52.7582 bits (125), Expect = 1.557e-7
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 1

Query:    1 AAALTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIATIVQKNGYGGLMRGWVPRMLFHAPAAAICWSTYEAAKTFFQDLN 240
            ++  T PLD+V+ + Q +G+ G      + +   +  IVQ  G  GL RG +P      P   IC+ TYE  K +F+DL+
Sbjct:  250 SSTATFPLDLVRRRKQLEGIGGRAVVYKTGLLGTLKRIVQTEGARGLYRGILPEYYKVVPGVGICFMTYETLKLYFKDLS 329

The following BLAST results are available for this feature:

BLAST of CF811378 vs. DB:swissprot:display
BLAST of CF811378 vs. Populus trichocarpa peptide v2.0
BLAST of CF811378 vs. P. persica 1.0 peptide
BLAST of CF811378 vs. TrEMBL
BLAST of CF811378 vs. Vitis vinifera peptide
BLAST of CF811378 vs. TAIR peptide

BLAST of CF811378 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
S2540_XENLA	2.186e-10	46.43	Solute carrier family 25 member 40 OS=Xenopus laev...	[more]
S2540_XENTR	6.359e-10	45.88	Solute carrier family 25 member 40 OS=Xenopus trop...	[more]
S2540_BOVIN	1.417e-9	43.02	Solute carrier family 25 member 40 OS=Bos taurus G...	[more]
S2540_HUMAN	1.199e-8	45.35	Solute carrier family 25 member 40 OS=Homo sapiens...	[more]
MRS3_YEAST	1.199e-8	41.46	Mitochondrial RNA-splicing protein MRS3 OS=Sacchar...	[more]
S2540_DANRE	2.672e-8	44.05	Solute carrier family 25 member 40 OS=Danio rerio ...	[more]
S2539_DANRE	2.672e-8	42.35	Solute carrier family 25 member 39 OS=Danio rerio ...	[more]
MFRN_DICDI	4.557e-8	42.35	Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=...	[more]
MFRN_CAEEL	1.015e-7	36.84	Mitoferrin OS=Caenorhabditis elegans GN=W02B12.9 P...	[more]
S2540_RAT	2.262e-7	40.48	Solute carrier family 25 member 40 OS=Rattus norve...	[more]

BLAST of CF811378 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0009s08130.1	5.269e-36	80.00	[more]
POPTR_0016s13300.1	7.608e-35	82.72	[more]
POPTR_0001s28920.1	9.936e-35	76.47	[more]
POPTR_0008s06120.1	3.013e-7	31.65	[more]

BLAST of CF811378 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3


Match Name	E-value	Identity
ppa008598m	3.427e-37	86.42	[more]
ppa008403m	2.222e-36	76.74	[more]
ppa007881m	3.696e-7	36.36	[more]

BLAST of CF811378 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7SR69\|D7SR69_VITVI	4.483e-37	84.52	Whole genome shotgun sequence of line PN40024, sca...	[more]
O82049\|O82049_RIBNI	7.647e-37	84.88	Mitochondrial carrier protein OS=Ribes nigrum GN=p...	[more]
B9RRI4\|B9RRI4_RICCO	2.460e-35	82.35	Mitochondrial carrier protein, putative OS=Ricinus...	[more]
Q8LEH2\|Q8LEH2_ARATH	7.157e-35	80.23	Putative mitochondrial carrier protein OS=Arabidop...	[more]
O64731\|O64731_ARATH	7.157e-35	80.23	Putative mitochondrial carrier protein OS=Arabidop...	[more]
D7SJQ4\|D7SJQ4_VITVI	6.059e-34	77.65	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7KGY2\|D7KGY2_ARALY	6.059e-34	76.74	Mitochondrial substrate carrier family protein OS=...	[more]
D7LBK8\|D7LBK8_ARALY	1.033e-33	82.72	Mitochondrial substrate carrier family protein OS=...	[more]
Q8L6Z2\|Q8L6Z2_ARATH	2.302e-33	76.74	At1g07030 OS=Arabidopsis thaliana GN=At1g07030 PE=...	[more]
B9IGH0\|B9IGH0_POPTR	8.749e-33	82.72	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of CF811378 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01030290001	2.402e-39	84.52	assembled CDS	[more]
GSVIVT01024642001	3.247e-36	77.65	assembled CDS	[more]
GSVIVT01007869001	2.864e-8	37.93	assembled CDS	[more]

BLAST of CF811378 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G30160.1	5.488e-37	80.23	\| Symbols: \| Mitochondrial substrate carrier fami...	[more]
AT1G07030.1	1.765e-35	76.74	\| Symbols: \| Mitochondrial substrate carrier fami...	[more]
AT1G74240.1	3.707e-9	37.93	\| Symbols: \| Mitochondrial substrate carrier fami...	[more]
AT3G55640.1	1.557e-7	33.75	\| Symbols: \| Mitochondrial substrate carrier fami...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001993	Mitochondrial substrate carrier	PANTHER	PTHR11896	MITOCHONDRIAL CARRIER PROTEIN RELATED	coord: 1..86 score: 7.5
IPR001993	Mitochondrial substrate carrier	SUPERFAMILY	103506	Mitochondrial carrier	coord: 1..72 score: 7.2
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 1..78 score: 9.7
IPR018108	Mitochondrial substrate/solute carrier	PROFILE	PS50920	SOLCAR	coord: 1..75 score: 15
None	No IPR available	GENE3D	1.50.40.10	no description	coord: 1..76 score: 1.4
None	No IPR available	PANTHER	PTHR11896:SF77	SOLUTE CARRIER FAMILY 25, MEMBER 28	coord: 1..86 score: 7.5

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811378 ID=CF811378; Name=CF811378; organism=Vaccinium corymbosum; type=EST; length=575bp
GCTGCTGCTTTAACTACTCCACTTGATGTTGTCAAAACTCAGTTGCAGTG
TCAGGGCGTTTGTGGATGTGATCGATTCTCTAGCAGTTCAATTCAGGATG
TCATTGCGACTATAGTGCAGAAGAATGGATATGGAGGGCTTATGAGAGGT
TGGGTCCCCAGAATGCTATTCCATGCACCTGCTGCTGCAATCTGCTGGTC
TACCTATGAGGCAGCAAAAACCTTCTTTCAAGACCTCAATGGAAGAAATA
ACAGCTCAGTCGATTAATAAGATCATTGAAGTTGCATGTATATCCGCAGA
CACTTCCTCCAGATTGACCTGGAAGCCACCGGAACTCTGGAAGCAAGTGC
TTCACCCTGGTTGTAGTAATCGAATAACACTGAAGCATTGTTCTATCATA
CTTGCTCATTATCTGAGTGAGCTGGTGGAGTCATATGCGAAGAAGGATCG
GAGCTCACTGTATAGTATGCTAATCATCTCTTCTCAGATCAGATGATGTT
ATCGGTAAAAAAATNGGGGTAGTTTATTTGTTCCCCACAGNATCGGGGGT
ATACTTTCCTTGATTCAAAACTTTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001993	Mitochondrial substrate carrier
IPR018108	Mitochondrial_sb/sol_carrier
noIPR	unintegrated