CF811424 | GDV

EST Overview


Name	CF811424
Unique Name	CF811424
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	511

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: DNLZ_XENLA (DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.851e-11
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1

Query:  328 MIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            +I+TCKVC TRS KT+ + +Y KGVV+ RC GC N H+IAD+LG
Sbjct:   84 LIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLG 127

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: DNLZ_DANRE (DNL-type zinc finger protein OS=Danio rerio GN=dnlz PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 9.220e-9
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 1

Query:  328 MIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHL 456
            +++TCKVC TRS+K + + +Y KGVV+  C GC N H+IAD+L
Sbjct:   83 LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNL 125

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: DNLZ_HUMAN (DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.573e-8
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 1

Query:  328 MIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+LG
Sbjct:   71 LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLG 114

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: DNLZ_MOUSE (DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 7.805e-8
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 1

Query:  328 MIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHL 456
            +++TCKVC TRS K + + +Y +GVV+  C GC N H+IAD+L
Sbjct:   75 LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNL 117

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: ZIM17_YEAST (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae GN=ZIM17 PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 5.059e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 1

Query:  322 LAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHL 456
            + + FTCK C TRS  T+ +++YEKG V+  C  C   HLIADHL
Sbjct:   69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHL 113

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: ZIM17_YEAS7 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 5.059e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 1

Query:  322 LAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHL 456
            + + FTCK C TRS  T+ +++YEKG V+  C  C   HLIADHL
Sbjct:   69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHL 113

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: ZIM17_YEAS6 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 5.059e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 1

Query:  322 LAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHL 456
            + + FTCK C TRS  T+ +++YEKG V+  C  C   HLIADHL
Sbjct:   69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHL 113

[Close]

BLAST of CF811424 vs. DB:swissprot:display
Match: ZIM17_YEAS1 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 5.059e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 1

Query:  322 LAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHL 456
            + + FTCK C TRS  T+ +++YEKG V+  C  C   HLIADHL
Sbjct:   69 MMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHL 113

[Close]

BLAST of CF811424 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s03710.1 ()

HSP 1 Score: 157.918 bits (398), Expect = 3.141e-39
Identity = 81/150 (54.00%), Postives = 105/150 (70.00%), Query Frame = 1

Query:   10 QIQRRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            Q++R L +L    QP TSSL    SW+ L SA+S F+ ++   R +QTL +P+    ++ E  E + L+P+  S+   +  + +  SA  +++ SNLK S RHDLAMIFTCKVCETRS+KTVCRESYEKGVVVARC GCNNLHLIADHLG
Sbjct:    9 QLRRLLSALAHNNQPFTSSLNKEHSWKLLPSASSLFTRNDFYGRGLQTLAKPANQANEESENHE-NGLKPNCSSANAPAQVNSNEGSATTYSSLSNLKTSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCNNLHLIADHLG 157

[Close]

BLAST of CF811424 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s07050.1 ()

HSP 1 Score: 53.1434 bits (126), Expect = 1.090e-7
Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = 1

Query:  376 CRESYEKGVVVARCSGCNNLHLIADHL 456
            CRESYEKGVVVA C GCNNL LIADHL
Sbjct:    1 CRESYEKGVVVAWCGGCNNLLLIADHL 27

[Close]

BLAST of CF811424 vs. P. persica 1.0 peptide
Match: ppa011950m ()

HSP 1 Score: 135.191 bits (339), Expect = 1.554e-32
Identity = 76/153 (49.67%), Postives = 97/153 (63.40%), Query Frame = 1

Query:    1 AARQIQRRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            AAR +QRR+ SLF + Q Q + L+     QF+ S +S        +R  QT    +    + +       L+P+ DS+   S  +  S+S VKF+A +NLK S RHDLAM+FTCKVCETRS+KT  RESYE GVVVARC GC+NLHLIADHLG
Sbjct:    2 AARMLQRRIGSLFLSNQQQHAKLFKE---QFVPSVSSVLGKYGFDKRDFQTQTNATNLVNEGLADHGDGSLKPNCDSNNSPSLSNAISSSDVKFSAAANLKTSPRHDLAMLFTCKVCETRSMKTCSRESYESGVVVARCGGCDNLHLIADHLG 151

[Close]

BLAST of CF811424 vs. TrEMBL
Match: D7TM68|D7TM68_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016242001 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.363e-40
Identity = 88/153 (57.52%), Postives = 105/153 (68.63%), Query Frame = 1

Query:    1 AARQIQRRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            AAR +QR   S    K PQT  +   PSWQFL SA++ F+ D+  RR + T  +P+    +D E  EA  L  +SDS+  +S    D NSAVK+ A SNLK SSRHDLAMIFTCKVCETRS+KT CRESYE+GVVV RC GC+NLHLIAD LG
Sbjct:    2 AARLLQRIGRSFLGPKHPQTPIIKE-PSWQFLPSASAAFTRDQFYRRGLGTQVEPTNYANEDEEKCEAGSLNLNSDSADDVSQVKSDDNSAVKYTAMSNLKTSSRHDLAMIFTCKVCETRSVKTACRESYERGVVVVRCDGCSNLHLIADRLG 153

[Close]

BLAST of CF811424 vs. TrEMBL
Match: B9HLJ0|B9HLJ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1084263 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.141e-37
Identity = 81/150 (54.00%), Postives = 105/150 (70.00%), Query Frame = 1

Query:   10 QIQRRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            Q++R L +L    QP TSSL    SW+ L SA+S F+ ++   R +QTL +P+    ++ E  E + L+P+  S+   +  + +  SA  +++ SNLK S RHDLAMIFTCKVCETRS+KTVCRESYEKGVVVARC GCNNLHLIADHLG
Sbjct:    9 QLRRLLSALAHNNQPFTSSLNKEHSWKLLPSASSLFTRNDFYGRGLQTLAKPANQANEESENHE-NGLKPNCSSANAPAQVNSNEGSATTYSSLSNLKTSPRHDLAMIFTCKVCETRSVKTVCRESYEKGVVVARCGGCNNLHLIADHLG 157

[Close]

BLAST of CF811424 vs. TrEMBL
Match: B9SY63|B9SY63_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0481360 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.536e-36
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 1

Query:   10 QIQRRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQP-SEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            QI+R L  L    Q  TSS    P+WQFL S  S F+ ++  RRR QT   P S+P  +D +  E+S    + +S    S+ + + +S VK++A S+LK S RHDLAMIFTCKVCETRS+KT+CRESYEKGVVVARC GCNNLHLIAD LG
Sbjct:    9 QIRRVLSVLTHNNQLGTSSFNKEPAWQFLPSTTSIFARNDFYRRRFQTQSNPASQP--EDSQNHESSCPNRNCESDNAPSDINSNEDSPVKYSAVSSLKTSPRHDLAMIFTCKVCETRSVKTICRESYEKGVVVARCGGCNNLHLIADRLG 157

[Close]

BLAST of CF811424 vs. TrEMBL
Match: C6T3Q6|C6T3Q6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.459e-34
Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 1

Query:    1 AARQIQRRLLSLFSAK--QPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            AAR +QRR +S+FS +   P T   ++ P+   L+S           +R + T   P +P  +DVE +EA  L+   +  +  ++ S +  S+VKF+  S+LK SSRHDL M+FTCKVCETRSIKT CRESYEKGVVVARC GCNNLHLIADHLG
Sbjct:    2 AARMLQRRFISIFSRQTHHPITQESWYSPTSAILNSYGFH-------QRGVMTHTNPIKPVCEDVENNEADTLKSSPNPDEVATSISVNETSSVKFSTKSSLKTSSRHDLVMVFTCKVCETRSIKTACRESYEKGVVVARCGGCNNLHLIADHLG 149

[Close]

BLAST of CF811424 vs. TrEMBL
Match: B7FMG1|B7FMG1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.161e-29
Identity = 76/157 (48.41%), Postives = 101/157 (64.33%), Query Frame = 1

Query:    4 ARQIQRRLLSLFSAKQPQTSSLYHG--PSWQFLS---SANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            AR +QRR +S        T S +H   P +Q  S   S N+  +G  I +R + T    ++   +DV+ SEA  L+   ++     + ++DS  A+K +A  ++KVSSRHDLAM+FTCKVCETRS+KT CRESYEKGVV+ARC GCNNLHLIADH G
Sbjct:    5 ARFLQRRFIS--------TQSFHHDRHPIFQASSGHSSINAILNGRGILKRGVSTQTNLNQNICEDVKISEADTLKSGVNNVPTSMSITEDS--AIKGSAGFSVKVSSRHDLAMVFTCKVCETRSVKTFCRESYEKGVVIARCGGCNNLHLIADHRG 151

[Close]

BLAST of CF811424 vs. TrEMBL
Match: Q6K719|Q6K719_ORYSJ (Os02g0819700 protein OS=Oryza sativa subsp. japonica GN=P0474F11.5 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.514e-23
Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 1

Query:  157 PQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDD--------SNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            P P   GI+ ++T   +      D ++ I +   D        S+S  K   TSNLK+S RHDLAMIFTCKVCETRS+K   +ESYEKGVVVARC GCNN HLIAD LG
Sbjct:   32 PAPVTAGIRSLQTIMEASNNASDDRNQDIEDSKTDTVPATVPSSDSGFKVRDTSNLKISPRHDLAMIFTCKVCETRSMKMASKESYEKGVVVARCGGCNNFHLIADRLG 140

[Close]

BLAST of CF811424 vs. TrEMBL
Match: A2XB36|A2XB36_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09474 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.514e-23
Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 1

Query:  157 PQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDD--------SNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            P P   GI+ ++T   +      D ++ I +   D        S+S  K   TSNLK+S RHDLAMIFTCKVCETRS+K   +ESYEKGVVVARC GCNN HLIAD LG
Sbjct:   32 PAPVTAGIRSLQTIMEASNNASDDRNQDIEDSKTDTVPAMVPSSDSGFKVRDTSNLKISPRHDLAMIFTCKVCETRSMKMASKESYEKGVVVARCGGCNNFHLIADRLG 140

[Close]

BLAST of CF811424 vs. TrEMBL
Match: A9NTP9|A9NTP9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.512e-23
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 1

Query:  205 SRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            + L  +  S+  IS P+   N +V+F A SNL  S RH+LAM +TC+VCETRS+KT+ RESYEKGVV+ RCSGCNNLHLIADHLG
Sbjct:   90 ANLESEGVSAMEISKPNA-KNDSVEFTAFSNLNASKRHNLAMAYTCRVCETRSVKTMNRESYEKGVVIVRCSGCNNLHLIADHLG 173

[Close]

BLAST of CF811424 vs. TrEMBL
Match: B6TQA5|B6TQA5_MAIZE (DNL zinc finger family protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.368e-21
Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1

Query:  151 TLPQPSEPGIKDVET----SEASRLRPDSDSSKGISNPSD--DSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            + P P+  G++ + T    S+ +    D   S+    P+      S +K   TSNLK+S RHDLAMIFTCKVCETRS+K   R+SYE GVVV RC GCNNLHL+AD LG
Sbjct:   31 SFPAPAAAGLRSLLTVAGASDTATEPQDQQHSETTPPPASVPTPESGLKVRDTSNLKISPRHDLAMIFTCKVCETRSMKMASRDSYENGVVVVRCGGCNNLHLMADRLG 139

HSP 2 Score: 20.7866 bits (42), Expect = 2.368e-21
Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = 2

Query:  458 GGFGEPGSI 484
            G FGEPGSI
Sbjct:  139 GWFGEPGSI 147

[Close]

BLAST of CF811424 vs. TrEMBL
Match: C0PPD9|C0PPD9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.787e-21
Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 1

Query:  151 TLPQPSEPGIKDV----ETSEASRLRPDSDSSKGISNPSD--DSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            + P P+  G++ +      S+ +    D   S+    P+      S +K   TSNLK+S RHDLAMIFTCKVCETRS+K   R+SYE GVVV RC GCNNLHL+AD LG
Sbjct:   31 SFPAPAAAGLRSLLKAAGASDTATEPQDQQHSETTPPPASVPTPESGLKVRDTSNLKISPRHDLAMIFTCKVCETRSMKMASRDSYENGVVVVRCGGCNNLHLMADRLG 139

HSP 2 Score: 20.7866 bits (42), Expect = 6.787e-21
Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = 2

Query:  458 GGFGEPGSI 484
            G FGEPGSI
Sbjct:  139 GWFGEPGSI 147

[Close]

BLAST of CF811424 vs. Vitis vinifera peptide
Match: GSVIVT01016242001 (assembled CDS)

HSP 1 Score: 169.088 bits (427), Expect = 8.344e-43
Identity = 88/153 (57.52%), Postives = 105/153 (68.63%), Query Frame = 1

Query:    1 AARQIQRRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEICRRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            AAR +QR   S    K PQT  +   PSWQFL SA++ F+ D+  RR + T  +P+    +D E  EA  L  +SDS+  +S    D NSAVK+ A SNLK SSRHDLAMIFTCKVCETRS+KT CRESYE+GVVV RC GC+NLHLIAD LG
Sbjct:    2 AARLLQRIGRSFLGPKHPQTPIIKE-PSWQFLPSASAAFTRDQFYRRGLGTQVEPTNYANEDEEKCEAGSLNLNSDSADDVSQVKSDDNSAVKYTAMSNLKTSSRHDLAMIFTCKVCETRSVKTACRESYERGVVVVRCDGCSNLHLIADRLG 153

[Close]

BLAST of CF811424 vs. Vitis vinifera peptide
Match: GSVIVT01012002001 (assembled CDS)

HSP 1 Score: 52.7582 bits (125), Expect = 8.715e-8
Identity = 31/95 (32.63%), Postives = 50/95 (52.63%), Query Frame = 1

Query:  175 GIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            G +D  +     L P   SS   ++ SDDS S     A+ ++K+  R  L + FTC  C  R+ + + R ++E+G V  +C+GC   H + D+LG
Sbjct:   64 GFRDGNSEANLELGPSVSSSSHSNSVSDDSCS----EASIDIKLP-RRSLIVQFTCDACGERTERLINRLAFERGTVFVQCAGCLQHHKLVDNLG 153

[Close]

BLAST of CF811424 vs. TAIR peptide
Match: AT3G54826.1 (| Symbols: | Zim17-type zinc finger protein | chr3:20310354-20311652 FORWARD LENGTH=223)

HSP 1 Score: 101.293 bits (251), Expect = 3.082e-22
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 1

Query:   19 RRLLSLFSAKQPQTSSLYHGPSWQFLSSANSFFSGDEIC----RRRIQTLPQPSEPGIKDVETSEASRLRPDSDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            RR LSLFS +Q +        S + LS +NS FS   +     +R++  + + +E  + +V  S  S     ++S+K  S  +      VK+   S LK++ RHD  M+FTCKVC+TRS+K   RESYE GVVV RC GC+NLHLIAD  G
Sbjct:   39 RRALSLFSNQQHRFP--LSQVSTEQLSLSNSLFSRSHVYGRLFQRQLSVIREANEASVTNVCNSSNSA----TESAKVPSPATPSEEMMVKYK--SQLKINPRHDFMMVFTCKVCDTRSMKMASRESYENGVVVVRCGGCDNLHLIADRRG 181

[Close]

BLAST of CF811424 vs. TAIR peptide
Match: AT1G68730.1 (| Symbols: | Zim17-type zinc finger protein | chr1:25810321-25811128 REVERSE LENGTH=170)

HSP 1 Score: 53.9138 bits (128), Expect = 5.643e-8
Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 1

Query:  223 SDSSKGISNPSDDSNSAVKFNATSNLKVSSRHDLAMIFTCKVCETRSIKTVCRESYEKGVVVARCSGCNNLHLIADHLG 459
            +D SK   NP ++SN + +  A+ ++K+  R  L + FTC  C  R+ + + R +YEKG+V  +C+GC   H + D+LG
Sbjct:   77 ADDSK--LNPDEESNDSAEV-ASIDIKLP-RRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLG 151

The following BLAST results are available for this feature:

BLAST of CF811424 vs. DB:swissprot:display
BLAST of CF811424 vs. Populus trichocarpa peptide v2.0
BLAST of CF811424 vs. P. persica 1.0 peptide
BLAST of CF811424 vs. TrEMBL
BLAST of CF811424 vs. Vitis vinifera peptide
BLAST of CF811424 vs. TAIR peptide

BLAST of CF811424 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
DNLZ_XENLA	9.851e-11	61.36	DNL-type zinc finger protein OS=Xenopus laevis GN=...	[more]
DNLZ_DANRE	9.220e-9	53.49	DNL-type zinc finger protein OS=Danio rerio GN=dnl...	[more]
DNLZ_HUMAN	1.573e-8	52.27	DNL-type zinc finger protein OS=Homo sapiens GN=DN...	[more]
DNLZ_MOUSE	7.805e-8	51.16	DNL-type zinc finger protein OS=Mus musculus GN=Dn...	[more]
ZIM17_YEAST	5.059e-7	51.11	Mitochondrial protein import protein ZIM17 OS=Sacc...	[more]
ZIM17_YEAS7	5.059e-7	51.11	Mitochondrial protein import protein ZIM17 OS=Sacc...	[more]
ZIM17_YEAS6	5.059e-7	51.11	Mitochondrial protein import protein ZIM17 OS=Sacc...	[more]
ZIM17_YEAS1	5.059e-7	51.11	Mitochondrial protein import protein ZIM17 OS=Sacc...	[more]

BLAST of CF811424 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0008s03710.1	3.141e-39	54.00		[more]
POPTR_0006s07050.1	1.090e-7	88.89		[more]

BLAST of CF811424 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa011950m	1.554e-32	49.67		[more]

BLAST of CF811424 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7TM68\|D7TM68_VITVI	1.363e-40	57.52	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HLJ0\|B9HLJ0_POPTR	3.141e-37	54.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SY63\|B9SY63_RICCO	4.536e-36	54.97	Putative uncharacterized protein OS=Ricinus commun...	[more]
C6T3Q6\|C6T3Q6_SOYBN	1.459e-34	50.97	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FMG1\|B7FMG1_MEDTR	9.161e-29	48.41	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q6K719\|Q6K719_ORYSJ	1.514e-23	53.21	Os02g0819700 protein OS=Oryza sativa subsp. japoni...	[more]
A2XB36\|A2XB36_ORYSI	1.514e-23	53.21	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A9NTP9\|A9NTP9_PICSI	7.512e-23	62.35	Putative uncharacterized protein OS=Picea sitchens...	[more]
B6TQA5\|B6TQA5_MAIZE	2.368e-21	50.46	DNL zinc finger family protein OS=Zea mays PE=2 SV...	[more]
C0PPD9\|C0PPD9_MAIZE	6.787e-21	49.54	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of CF811424 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01016242001	8.344e-43	57.52	assembled CDS	[more]
GSVIVT01012002001	8.715e-8	32.63	assembled CDS	[more]

BLAST of CF811424 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G54826.1	3.082e-22	41.72	\| Symbols: \| Zim17-type zinc finger protein \| chr...	[more]
AT1G68730.1	5.643e-8	36.71	\| Symbols: \| Zim17-type zinc finger protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, Zim17-type	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 110..153 score: 7.7
IPR007853	Zinc finger, Zim17-type	PFAM	PF05180	zf-DNL	coord: 109..154 score: 1.1
None	No IPR available	PANTHER	PTHR20922:SF13	UNCHARACTERIZED	coord: 110..153 score: 7.7

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811424 ID=CF811424; Name=CF811424; organism=Vaccinium corymbosum; type=EST; length=511bp
GCGGCTCGGCAGATTCAGAGGCGATTACTCTCTCTCTTTTCCGCTAAACA
GCCTCAAACCTCCTCTCTCTACCACGGACCCTCGTGGCAATTTCTTTCAT
CTGCAAATTCTTTCTTCAGCGGAGATGAAATATGCAGAAGAAGAATACAG
ACGTTGCCTCAACCAAGTGAGCCAGGTATTAAAGATGTGGAAACCTCAGA
AGCATCCAGACTGAGACCTGATTCTGACTCGTCAAAGGGTATCTCCAACC
CGTCTGATGATTCTAATTCTGCTGTTAAATTCAATGCCACCTCCAACTTA
AAGGTTTCCTCCCGGCATGATCTTGCCATGATATTTACTTGCAAGGTCTG
TGAAACCAGATCCATCAAGACAGTTTGTCGCGAATCGTATGAGAAAGGTG
TGGTAGTGGCACGGTGCAGTGGGTGCAATAACCTACACCTAATTGCAGAT
CACCTGGGGGGGGTTTGGAGAACCAGGGAGCATCNAAGGACCTCTTANCT
GCTCGTGGCGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007853	Znf_DNL-typ
noIPR	unintegrated