CV090250

EST Overview
NameCV090250
Unique NameCV090250
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length806
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_YEAST (DNA-directed RNA polymerase I subunit RPA1 OS=Saccharomyces cerevisiae GN=RPA1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.340e-36
Identity = 105/311 (33.76%), Postives = 161/311 (51.77%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFN----------------------------HELEFNNYITGLPKLLKENAKKYIEEVKKN---KISSELKKPEDLLK------------LVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDL--SASVGPHQVSRIYKLRMKLNGDRLSPSDDYEETLEVWFVKELEDAIQIIWVYSPES 800
            L K LE + V YD ++RDADG+++QF YG D +D+ + S ++QF+    N   + +K+N                             E  +   +   P L K N  KY+  V +N   K+ S L K   L K            L++ KY+ SL + GE VG+IA+QSVGEPSTQMTLNTFH AG G  NVTLGIPRL+EI+MTAS+ IKTP MT P+      + A    + +  V ++++ + + V +   +++      +R Y + M     R   +++Y E  +V   +EL++ I   +++  E+
Sbjct: 1023 LTKQLEGVHVSYDNSIRDADGTLVQFMYGGDAIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFKSSDGVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASAAIKTPQMTLPIWNDVSDEQADTFCKSISKVLLSEVIDKVIVTETTGTSNTAGGNAARSYVIHM-----RFFDNNEYSEEYDV-SKEELQNVISNQFIHLLEA 1327
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_SCHPO (DNA-directed RNA polymerase I subunit rpa1 OS=Schizosaccharomyces pombe GN=rpa1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.340e-36
Identity = 93/268 (34.70%), Postives = 141/268 (52.61%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFN---------------------------------------NYITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKL 689
            L+K+LE L V YD+TVRD+DGSI+QF YGED +DV +   ++QF+  A N   + QK+  +   +                                        +   + +  ++N  K I   K++K+   L        L++ +Y  SL   GE VGV+A+QS+GEPSTQMTLNTFH AG G  NVTLGIPRL+EI+MTAS+ I+TP MT  L +    K A    +++  + ++++   + V +  +  G  + S+ Y +R+ L
Sbjct: 1036 LMKHLEGLCVQYDHTVRDSDGSIVQFHYGEDSLDVTKQKHLTQFEFSAKNYKSLIQKYKVKSVLSAVDSETASSYAKKALKKPYKYDPVLDKYPPSRYLGSVSEKFQRAVDEYTQKNPDKLIASKKESKLDDSLLNESKFKALMQLRYQQSLVDPGESVGVLASQSIGEPSTQMTLNTFHFAGFGAKNVTLGIPRLREIIMTASANIQTPTMTLRLNDGVSDKRASAFCKEVNKLVLSEVVRQVRVTEKISGQGSDEQSKTYAIRLDL 1303
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_DICDI (DNA-directed RNA polymerase I subunit rpa1 OS=Dictyostelium discoideum GN=polr1a PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.551e-33
Identity = 85/242 (35.12%), Postives = 134/242 (55.37%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHE-----------LEFNNYITGLPKL-------------------LKENAKKYIEEVKKNKISSELKKP-----EDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEV 623
            L+K+LE L V YD TVR++DGS+IQF YGED +++ +T ++++F  +A N  +   +F  E           +E+N  I   P+L                          YIE   +  I +   +      +D   L+   Y  S+   GE VG++ AQS+GEPSTQMTLNTFH AGRGE NVTLGIPRL+E++MTA+++  TP+M   + +   K +  ++ + ++++ ++DI + + V
Sbjct:  986 LIKHLEGLSVQYDNTVRESDGSVIQFNYGEDSLEIGKTPYLTKFPIIAENYELFKSQFPMEQLIEQLKNQEVVEYNRSIKTQPELDPVMSKFNPSSDLGCVSESFMNQLNHYIESNPQKLIKTTSNRDGKINEKDFRNLMYLYYSRSMVSPGESVGLLCAQSIGEPSTQMTLNTFHLAGRGEANVTLGIPRLRELIMTATTKPITPLMEFQINDSTNKVETEKMAKYLEILKLSDIIKDITV 1227
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_RAT (DNA-directed RNA polymerase I subunit RPA1 OS=Rattus norvegicus GN=Polr1a PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.661e-27
Identity = 81/207 (39.13%), Postives = 124/207 (59.90%), Query Frame = 3 
Query:  183 ELEFNNYITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKM-KVVTVADITECMEVIDLSAS--VGPHQVS-RIYKLRMKL------NGDRLSPSDDYEETLEVWFVKELEDAIQ 773
            ++ F +      K + + ++++  + +K+   SEL   + L  L++ K+  SL   GE VG++AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS+ IKTP+M+ P+      K A+R V+ + K +T   + E ++ +D+  S  +G  Q   R+Y+LR +         ++    +D    +E  F K L +AI+
Sbjct: 1160 DIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSL-DRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFN---TKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFRVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIK 1362

HSP 2 Score: 62.7734 bits (151), Expect = 2.665e-9
Identity = 48/148 (32.43%), Postives = 76/148 (51.35%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFI--SQFKALAVN-QPIIGQKFNHELEFNNYITGLPKLLKENAKKYIEEVKK--NKISSELKKPEDLLKLVR--QKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFH 425
            ++K+LE L + YD TVRD+DGS++QF YGEDG+D+ +T F+   QF  LA N + I+  K  HE+        L +   +   ++   +KK  ++ SS L +    L   +  Q  + +L   G+       Q+   P TQ  L  +H
Sbjct:  999 IIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEV--------LSRADPQKVLRHFRAIKKWHHRHSSALLRKGAFLSFSQKIQAAVKALNLEGK------TQNGRSPETQQMLQMWH 1132
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_DROME (DNA-directed RNA polymerase I subunit RPA1 OS=Drosophila melanogaster GN=RpI1 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 3 
Query:  225 LKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEV 623
            + E  +K I +  K K + +    E +  ++R K I SLA  GEPVG+IAAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM ASS IKTP M  P ++   +  A +L   +  VT+A++ E + V
Sbjct: 1137 VSERTRKLITDYAKRKPALK----ETIADIMRVKTIKSLAAPGEPVGLIAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIP-IKPGQQHQAEKLRINLNSVTLANLLEYVHV 1264
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_MOUSE (DNA-directed RNA polymerase I subunit RPA1 OS=Mus musculus GN=Polr1a PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26
Identity = 72/192 (37.50%), Postives = 116/192 (60.42%), Query Frame = 3 
Query:  219 KLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLE-KKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKL------NGDRLSPSDDYEETLEVWFVKELEDAIQ 773
            K + + ++++  + +++   SEL   + L  L++ K+  SL   GE VG++AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS+ IKTP+M+ P+ + KK  K    L +++  V + ++ + +++ +           ++Y+LR +         ++    +D    +E  F K L +AI+
Sbjct: 1172 KKIDDFSQEWAAQAERSYKKSELSL-DRLRTLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFDTKKALKKVKSLKKRLTRVCLGEVLQKVDIQESFCMGEKRNKFQVYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIK 1362

HSP 2 Score: 61.6178 bits (148), Expect = 5.936e-9
Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFI--SQFKALAVN-QPIIGQKFNHEL 188
            ++K+LE L + YD TVRD+DGS++QF YGEDG+D+ +T F+   QF  LA N + I+  K  HE+
Sbjct:  999 IIKHLEGLVIQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLAGNYEVIMKSKHLHEV 1063
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPA1_HUMAN (DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens GN=POLR1A PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26
Identity = 73/186 (39.25%), Postives = 113/186 (60.75%), Query Frame = 3 
Query:  237 AKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLE-KKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKL------NGDRLSPSDDYEETLEVWFVKELEDAIQ 773
            ++++  + +K+   SEL   + L  L++ K+  SL   GE VG++AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS+ IKTP+M+ P+L  KK  K    L +++  V + ++ + ++V +           ++Y+LR +         ++    +D    +E  F K L ++I+
Sbjct: 1171 SQEWAAQTEKSYEKSELSL-DRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIK 1355

HSP 2 Score: 62.3882 bits (150), Expect = 3.480e-9
Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFI--SQFKALAVNQPIIGQKFNHELEFNNYITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVG----EPSTQMTLNTFH 425
            ++K+LE L V YD TVRD+DGS++QF YGEDG+D+ +T F+   QF  LA N  +I  K  H  E          L + + KK +   +  K   + K P  LL+  R  ++S      E V  +  +S       P TQ  L  ++
Sbjct:  992 IIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVI-MKSQHLHEV---------LSRADPKKALHHFRAIK-KWQSKHPNTLLR--RGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWY 1125
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPC1_BOVIN (DNA-directed RNA polymerase III subunit RPC1 OS=Bos taurus GN=POLR3A PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.652e-25
Identity = 89/275 (32.36%), Postives = 137/275 (49.82%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVD---VHQTSFISQFKALAVN-QPIIGQKFNHELEFNNYITGLPKLLKENA-----KKYIEEVKK--NKISSELKKPED----------------------------LLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVR-KMKVVTVADITECMEVIDLSAS---VGPHQVSRIYKLRMKLNGD 698
            LVK+LE L   YD TVR + G IIQF YG DG+D   +       +FK +  N + +   +    L  N  +     ++K+N        +++E+KK   ++S ++KK  D                             L+  R KY+ +    G  VG + AQS+GEP TQMTL TFH AG   MN+TLG+PR++EI+  AS  I TPI+T   L+K    D  RLV+ +++   + +I+E +E + L      +    + RI  LR+++N +
Sbjct:  875 LVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCRSEPALSKNELLLSAESIMKKNEFLCCQDSFLQEIKKFIKEVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEII-NASKAISTPIITAQ-LDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAE 1147
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPC1_CHICK (DNA-directed RNA polymerase III subunit RPC1 OS=Gallus gallus GN=POLR3A PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.316e-24
Identity = 89/275 (32.36%), Postives = 136/275 (49.45%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVD---VHQTSFISQFKALAVN-QPIIGQKFNHELEFNNYITGLPKLLKENA-----KKYIEEVKK--NKISSELKKPED----------------------------LLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVR-KMKVVTVADITECMEVIDLSAS---VGPHQVSRIYKLRMKLNGD 698
            LVK+LE L   YD TVR + G IIQF YG DG+D   +       +FK +  N + +   +    L  N  +     ++K+N        +++E+KK    +S ++KK  D                             L+  R KY+ +    G  VG + AQS+GEP TQMTL TFH AG   MN+TLG+PR++EI+  AS  I TPI+T   L+K    D  RLV+ +++   + +I+E +E + L      +    + RI  LR+++N +
Sbjct:  875 LVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLCCRDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEII-NASKAISTPIITAQ-LDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAE 1147
[Close]
BLAST of CV090250 vs. DB:swissprot:display
Match: RPC1_HUMAN (DNA-directed RNA polymerase III subunit RPC1 OS=Homo sapiens GN=POLR3A PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.002e-24
Identity = 89/275 (32.36%), Postives = 135/275 (49.09%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVD---VHQTSFISQFKALAVN-QPIIGQKFNHELEFNNYITGLPKLLKENA-----KKYIEEVKK--NKISSELKKPED----------------------------LLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVR-KMKVVTVADITECMEVIDLSAS---VGPHQVSRIYKLRMKLNGD 698
            LVK+LE L   YD TVR + G IIQF YG DG+D   +       +FK +  N + +        L  N  I     ++K++        +++E+KK    +S ++KK  D                             L+  R KY+ +    G  VG + AQS+GEP TQMTL TFH AG   MN+TLG+PR++EI+  AS  I TPI+T   L+K    D  RLV+ +++   + +I+E +E + L      +    + RI  LR+++N +
Sbjct:  875 LVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCPSEPALSKNELILTTESIMKKSEFLCCQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEII-NASKAISTPIITAQ-LDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAE 1147
[Close]
BLAST of CV090250 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s05420.1 ()

HSP 1 Score: 192.971 bits (489), Expect = 1.906e-49
Identity = 106/160 (66.25%), Postives = 123/160 (76.88%), Query Frame = 3 
Query:  312 LVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPS------DDYEETLEVWFVKELEDAIQ 773
            L++QK+ +SLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTAS+ IKTPIMTCPL E + K+DA RL  K+K VTVADI E MEV  +  +V    + RIYKL+MKL      P       +++EETLEV FV+ELEDAIQ
Sbjct:  568 LLKQKFFTSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIKTPIMTCPLHEGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAVQNDDICRIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQ 727
[Close]
BLAST of CV090250 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s10940.1 ()

HSP 1 Score: 87.0409 bits (214), Expect = 1.473e-17
Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 3 
Query:  315 VRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEK--KLKKDAIRLVRKMKVVTVADITECMEV 623
            +  +++ SL   GE +G +AAQS+GEP+TQMTLNTFH+AG    NVTLG+PRL+EI+  A  +IKTP ++  L  +  K K+ A  +   ++  T+  +T+  EV
Sbjct: 1070 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA-KKIKTPSLSVYLKPEFNKTKEKAKNVQCALEYTTLRSVTQATEV 1173
[Close]
BLAST of CV090250 vs. P. persica 1.0 peptide
Match: ppa000153m ()

HSP 1 Score: 274.633 bits (701), Expect = 3.540e-74
Identity = 149/264 (56.44%), Postives = 188/264 (71.21%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELE-FNNYITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLN-GDRLS-----PSDDYEETLEVWFVKELEDAIQ 773
            ++KNLECLKV YD TVRDADGSIIQF YGEDG+DVH TSFI +F++L  N+ +  +K   +++  N YI  LP  LKE A+K++  +   +     +  ED LKL+  KY+ SLA  GEPVGV+A QSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTA++ IKTP+MTCPL + + K++A  L  K+K +TVADI E M+V  +   +   Q  RIYKL M L+  + L       S+D+EE LE+ FV+ELEDAIQ
Sbjct:  954 IIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSFIQKFESLIANKEMFHKKGRRQMDKLNPYIKDLPLALKEKAEKFVHNLALKEKDHNFQ--EDFLKLMEHKYLCSLAQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVMTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDGQTCRIYKLEMTLHVPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQ 1215
[Close]
BLAST of CV090250 vs. P. persica 1.0 peptide
Match: ppa000093m ()

HSP 1 Score: 86.6557 bits (213), Expect = 1.367e-17
Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 3 
Query:  315 VRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEK--KLKKDAIRLVRKMKVVTVADITECMEV 623
            +  +++ SL   GE +G +AAQS+GEP+TQMTLNTFH+AG    NVTLG+PRL+EI+  A  +IKTP ++  L  +  K K+ A  +   ++  T+  +T+  EV
Sbjct: 1068 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA-KRIKTPSLSVYLKPEANKTKERAKNVQCALEYTTLRSVTQATEV 1171
[Close]
BLAST of CV090250 vs. P. persica 1.0 peptide
Match: ppa023322m ()

HSP 1 Score: 83.9593 bits (206), Expect = 8.862e-17
Identity = 64/204 (31.37%), Postives = 93/204 (45.59%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNYIT-------------------------GLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGE--PVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPL 533
            L K +E L V YD TVR++ G +IQF YG+DG+D            L + +  +  K       N Y++                         G    L++   KY+E  +K   +  L     L + + Q          E  P   I+ QS+ EP+TQMTL TFH AG   MN+TLG+PR++EIL  A  +I+TP++   L
Sbjct:  781 LTKVMEDLCVQYDNTVRNSSGCVIQFCYGDDGMDPAVMEGTEDGAPLDLPRLFLKAKATCPARENEYLSPEQVNEMVRSRLSKQDMTLDGGCFVGFKTSLEQFLNKYVEAFRKTHETFLLDDHSALKQKIVQNISGVTFRQLEVFPDTCISPQSICEPATQMTLKTFHFAGVASMNITLGVPRIKEIL-DAVKKIRTPVIFATL 983
[Close]
BLAST of CV090250 vs. TrEMBL
Match: D7TI03|D7TI03_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033327001 PE=4 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 6.363e-86
Identity = 169/264 (64.02%), Postives = 204/264 (77.27%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNYITGLPKLLKENAKKYIEE-VKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPS------DDYEETLEVWFVKELEDAIQ 773
            L+KNLECLKVCYDYTVRD+DGSI+QF YG+DGVDVHQTSFI++F+ALAVN+ ++ +KF  + +FN YI  LPK L++  KK+IE  +++ +    +KK +D + LV+QKYISSLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGE+NVTLGIPRLQEILMTA++ IKTPIMTCPL   + K DA RL  K+K VTVADITE MEV  +  +V  HQ   IYKL+MKL    L P       +D EETLE  FV+ELEDAIQ
Sbjct: 1030 LIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQ 1293
[Close]
BLAST of CV090250 vs. TrEMBL
Match: B9SL65|B9SL65_RICCO (DNA-directed RNA polymerase OS=Ricinus communis GN=RCOM_0090500 PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.518e-79
Identity = 162/265 (61.13%), Postives = 201/265 (75.85%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHEL-EFNNYITGLPKLLKENAKKYIEEVK-KNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPS------DDYEETLEVWFVKELEDAIQ 773
            L+KNLECLK+ YD+TVRDADGS++QF YGEDGVDVHQTSFI++FK LA+NQ +I ++   +L  FN+YI+ LP+ LKE A +++++     +I+S L K EDL  L++QK++ SLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTAS  IKTPIMTCPL E +  +DA  L  K++ VTVADI E MEV  +  ++    V RIYKL+MKL      P       +D+EETLEV F++ELEDAIQ
Sbjct: 1030 LIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQ 1294
[Close]
BLAST of CV090250 vs. TrEMBL
Match: D7LVV3|D7LVV3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486216 PE=4 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 3.622e-73
Identity = 150/267 (56.18%), Postives = 201/267 (75.28%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHEL--EFNNYITGLPKLLKENAKKYIEEVKKN-KISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSP------SDDYEETLEVWFVKELEDAIQI 776
            L+KNLE LK+ YD TVRDADGSIIQF YGEDGVDVH++SFI +FK LA+NQ ++ Q+ + ++    N+YI+ LP  LK  A+K++E +  N +I+S+  + E+LLKLV+ K+ +SLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTA++ IKTPIMTCPLL+ K K+DA  +  K++ +TVADI + M++  +  +V  ++V  I+KL++ L      P        D+EET+ V F+++LEDAI+I
Sbjct: 1038 LMKNLESLKINYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELAINQDMVLQRCSEDMLSGANSYISDLPISLKNGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITGKLRKITVADIIKSMDLSVVPYTVYKNEVCSIHKLKINLYKPEHYPKHTDITEKDWEETMTVVFLRKLEDAIEI 1304
[Close]
BLAST of CV090250 vs. TrEMBL
Match: Q9SVY0|Q9SVY0_ARATH (DNA-directed RNA polymerase OS=Arabidopsis thaliana GN=F15B8.150 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 3.066e-72
Identity = 148/266 (55.64%), Postives = 200/266 (75.19%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHEL--EFNNYITGLPKLLKENAKKYIEEVKKN-KISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSP------SDDYEETLEVWFVKELEDAIQ 773
            L+KNLE LKV YD TVRDADGSIIQF YGEDGVDVH++SFI +FK L +NQ ++ QK + ++    ++YI+ LP  LK+ A+K++E +  N +I+S+  + E+LLKLV+ K+ +SLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTA++ IKTPIMTCPLL+ K K+DA  +  +++ +TVADI + ME+  +  +V  ++V  I+KL++ L      P       +D+EET+   F+++LEDAI+
Sbjct: 1036 LMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCSEDMLSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMRAVFLRKLEDAIE 1301
[Close]
BLAST of CV090250 vs. TrEMBL
Match: A5BD07|A5BD07_VITVI (DNA-directed RNA polymerase OS=Vitis vinifera GN=VITISV_029145 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.514e-66
Identity = 125/178 (70.22%), Postives = 152/178 (85.39%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNYITGLPKLLKENAKKYIEE-VKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPL 533
            L+KNLECLKVCYDYTVRD+DGSI+QF YG+DGVDVHQTSFI++F+ALAVNQ ++ +KF  + +FN YI  LPK L++  KK+IE  +++ +    +KK +D + LV+QKYISSLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGE+NVTLGIPRLQEILMTA++ IKTPIMTCPL
Sbjct: 1167 LIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNQEVVCEKFGQDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPL 1344
[Close]
BLAST of CV090250 vs. TrEMBL
Match: Q69X40|Q69X40_ORYSJ (DNA-directed RNA polymerase OS=Oryza sativa subsp. japonica GN=P0429G06.12 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.059e-56
Identity = 141/296 (47.64%), Postives = 186/296 (62.84%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFIS-QFKALAVNQ-PIIGQKFNHE-----LEFNNYITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLE------------KKLKK---------------DAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPS------DDYEETLEVWFVKELEDAI 770
            L+K+LE LKV YD+TVRD DGSIIQF YGEDGVDV +TSF+  +F+ L+ N+  ++G+  +H      L  N YI+ LP+ L ENA ++++  +  K   ++K+ E L+KL++ KYISSL   GE VGV+AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRL+E+LMTAS++I TP M CPLLE             KLKK               DA R+  K++ V VADI E +EV  +        VS +YKL++KL    L P       ++  ETL   F+  ++ AI
Sbjct: 1081 LIKSLESLKVSYDHTVRDVDGSIIQFCYGEDGVDVLKTSFLDDKFRELSDNRRALLGKLDSHNDKHLLLNPNGYISELPEKLIENAMEFLKSKRNEKGRYDIKEKE-LMKLLKVKYISSLVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLKELLMTASAKISTPFMKCPLLEDKTWDDDEEEMDDKLKKARDAERLAAKLRTIDDAERIAAKLRRVRVADIVERIEVCTVPFHNNNGCVSTLYKLQLKLYPQGLYPRQSELTVEECHETLRTVFIDAMDLAI 1375
[Close]
BLAST of CV090250 vs. TrEMBL
Match: C0JAC0|C0JAC0_ORYCO (DNA-directed RNA polymerase OS=Oryza coarctata PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.598e-50
Identity = 126/294 (42.86%), Postives = 171/294 (58.16%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEF------NNYITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKL--------------------------KKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPS------DDYEETLEVWFVKELEDAI 770
            L+K+LE LKV YD+T          F YGEDGVDV +TSF+ +F+ L+ N+  +  K +   +       N YI+ LP  L ENA K+++E +K +      + E+L+KL++ KY+SSL   GE VGV+AAQS+GEPSTQMTLNTFH AGRGE+NVTLGIPRL+EILMTAS +I TP M CPL++ K                           + DA R+  K++ V VAD+ E +EV  +        VS +YKL+MKL    L P       D+ +ETL   F+  ++ AI
Sbjct: 1094 LIKSLESLKVSYDHT----------FCYGEDGVDVLKTSFLDKFRELSDNRRAVLDKLDSHNDKHLLSNPNGYISELPAKLIENAMKFLKENEKGRYDI---REEELMKLLKVKYLSSLVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGELNVTLGIPRLKEILMTASDKISTPFMKCPLIKTKTRFIPVVIYISLYTCFLHFSWSVEYDERNDAERIAAKLRRVHVADVLERIEVCTVPFHNNNGCVSTLYKLQMKLYPKELYPPQLELTVDECQETLRTVFIDAMDLAI 1374
[Close]
BLAST of CV090250 vs. TrEMBL
Match: C1EFA8|C1EFA8_9CHLO (DNA-directed RNA polymerase (Fragment) OS=Micromonas sp. RCC299 GN=MICPUN_65110 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 6.662e-43
Identity = 103/252 (40.87%), Postives = 154/252 (61.11%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNY------ITGLPKLLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLL-EKKLKKDAIRLVRKMKVVTVADITECMEVIDL---SASVGPHQVSRIYKLRMKLNGDRLSPSDDYEE 728
            ++KNLE L+V YD+TVRD DGS++QF YGEDG DV ++S+ S F+ LA N  ++      E E          I    K +K   ++   E K++ ++      E+  +L+  +Y++ LA  GE VG IA QSVGEPSTQMTLNTFH AGRGE NVTLGIPRL+E+LM A+ ++ TP+MT PLL   +  + A  L R+++ V +A++   + V +    ++  G  +++R Y + M+L G +    DD ++
Sbjct:  994 MIKNLETLRVHYDHTVRDCDGSVVQFQYGEDGADVTKSSYASDFQFLADNAELVKANLR-EAEAGRAEGKGASIKADLKSVKGVVERKPPEKKQSLVAQAGVTREEFKRLMNYRYLNQLAAPGEAVGCIAGQSVGEPSTQMTLNTFHFAGRGEANVTLGIPRLRELLMAAAKKLATPVMTLPLLPHAQTMEQAENLARRLRRVRLAELIRRLSVTENPCGTSHSGTGKLARTYTVSMQLRGPKTGEDDDDDD 1244
[Close]
BLAST of CV090250 vs. TrEMBL
Match: C1N756|C1N756_MICPS (DNA-directed RNA polymerase OS=Micromonas pusilla CCMP1545 GN=MICPUCDRAFT_36623 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.256e-41
Identity = 105/289 (36.33%), Postives = 163/289 (56.40%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKF------------------NHELE---------------FNNYITGLPKLLKENAKKYIEEVKKNKISSELKKP----------EDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLE-KKLKKDAIRLVRKMKVVTVADITECMEVID---LSASVGPHQVSRIYKLRMKLNGDRLSPSDDYEE 728
            LVKNLE L+V YD+TVRD DGSI+QF YG+D VDV +  ++ +F+ LA N  ++                      + E +                +N +  LP+  K+N   +I+       ++  K P          ++  +L+  +Y+S+LA  GE VG +AAQSVGEPSTQMTLNTFH AGRGE NVTLGIPRL+E+LM AS ++ TP+MT PL +  + ++DA  L R+++ V +A++   ++V +     +  G  +++R+Y + ++L G   + +D+  E
Sbjct: 1014 LVKNLETLRVHYDHTVRDCDGSIVQFHYGDDAVDVTKGGYLEKFQFLADNPELLRANLAAAEKDIAALRVIDEADEDEEKDASGKHPALPVMSSRPLSNALGTLPERFKDNLDAFIQRADPAAAAAAAKPPGLPALSGMTADEFKRLMNLRYLSALASPGEAVGCVAAQSVGEPSTQMTLNTFHFAGRGEANVTLGIPRLRELLMAASKKLATPVMTLPLRDGARNREDATALARRLRKVRLAELVRKLKVAERPCARSHGGSGELARVYTVTVELRGPVEADADEGNE 1302
[Close]
BLAST of CV090250 vs. TrEMBL
Match: Q00WA2|Q00WA2_OSTTA (DNA-directed RNA polymerase OS=Ostreococcus tauri GN=Ot14g01100 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.641e-41
Identity = 118/309 (38.19%), Postives = 168/309 (54.37%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNYITGLPKLLKENAKKYIEEVKKN--------------------KISSELKK-----------------------------PEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLE-KKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPH-QVSRIY--KLRMKLNGDRLSPSD----DYEETLEVWFVKEL 758
            LVKNLE L+V YDYTVRD DGSI+QF YGED VDV ++ ++ +F+ LA N  +I       L   + I+ LP L K+N K  I+E+ +                     K S ELK                               E+   L+   ++S++A  GE VGV+AAQSVGEPSTQMTLNTFH AGRGE NVTLGIPRL+E+LM AS ++ TP+M  PL +  + K+ A  L R+++ V +A++ E + V       GP  ++SR+Y   + M+   D   P++    ++  T+++ F  +L
Sbjct: 1123 LVKNLESLRVHYDYTVRDCDGSIVQFQYGEDSVDVTRSGYLQKFEFLAENPELI------MLNNKSAISTLPTLNKKNVK-VIDEISRKEDIPRFATENFGNQLGVLPEKFSVELKTFIDSRPKGYWADEKGDIKNASLAAKSGVTAEEFATLMNMMFLSNVAPPGEAVGVVAAQSVGEPSTQMTLNTFHFAGRGEANVTLGIPRLRELLMAASRKLLTPVMVLPLRKGYRSKEHANTLCRRLRRVVLAELMEKLSVKIKDYGTGPDGRLSRLYTVSIHMREGHDENDPNEVTFKEFARTVKLKFAPQL 1424
[Close]
BLAST of CV090250 vs. Vitis vinifera peptide
Match: GSVIVT01033327001 (assembled CDS)

HSP 1 Score: 321.242 bits (822), Expect = 2.810e-88
Identity = 169/264 (64.02%), Postives = 204/264 (77.27%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNYITGLPKLLKENAKKYIEE-VKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPS------DDYEETLEVWFVKELEDAIQ 773
            L+KNLECLKVCYDYTVRD+DGSI+QF YG+DGVDVHQTSFI++F+ALAVN+ ++ +KF  + +FN YI  LPK L++  KK+IE  +++ +    +KK +D + LV+QKYISSLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGE+NVTLGIPRLQEILMTA++ IKTPIMTCPL   + K DA RL  K+K VTVADITE MEV  +  +V  HQ   IYKL+MKL    L P       +D EETLE  FV+ELEDAIQ
Sbjct: 1030 LIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQ 1293
[Close]
BLAST of CV090250 vs. Vitis vinifera peptide
Match: GSVIVT01008740001 (assembled CDS)

HSP 1 Score: 117.857 bits (294), Expect = 4.719e-27
Identity = 90/271 (33.21%), Postives = 141/271 (52.03%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHELEFNNYITG--LPK-LLKENAKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVA-DITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSPSDDYEETLEVWFVKELEDAIQIIWVYSPESM 803
            LVK +E + V YD TVR++ G +IQF YGEDG+D        +  +L + +    + F +E++  N+     LP+  L  NA+K  +E  K                +  +++ SL   GE +G +AAQS+GEP+TQMTLNTFH+AG    NVTLG+PRL+EI+  A  +IKT     P L   LK D  +   + K V  A + T    V   +  + P      + LR++LN + +   +  E+ +   F+K++E   ++ W+   E +
Sbjct:  907 LVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE-TQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHRLIWNAQKTFKERLK----------------IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA-KKIKT-----PSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEKISP------WLLRIELNREMMLQDESAEDDV---FLKKIE---KVEWMLDTEGV 1142
[Close]
BLAST of CV090250 vs. Vitis vinifera peptide
Match: GSVIVT01025079001 (assembled CDS)

HSP 1 Score: 75.8702 bits (185), Expect = 2.056e-14
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  324 KYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVI 626
            +Y      AG  +G I A S+GEP TQMTL TFH AG   MNVTLG+PR++EI+   + +I TPI+T  L      K A  +  +++  T+  + + ++++
Sbjct: 1462 RYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII-NGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIV 1561
[Close]
BLAST of CV090250 vs. TAIR peptide
Match: AT3G57660.1 (| Symbols: NRPA1 | nuclear RNA polymerase A1 | chr3:21353746-21362814 FORWARD LENGTH=1670)

HSP 1 Score: 275.789 bits (704), Expect = 1.966e-74
Identity = 148/266 (55.64%), Postives = 200/266 (75.19%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVHQTSFISQFKALAVNQPIIGQKFNHEL--EFNNYITGLPKLLKENAKKYIEEVKKN-KISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVRKMKVVTVADITECMEVIDLSASVGPHQVSRIYKLRMKLNGDRLSP------SDDYEETLEVWFVKELEDAIQ 773
            L+KNLE LKV YD TVRDADGSIIQF YGEDGVDVH++SFI +FK L +NQ ++ QK + ++    ++YI+ LP  LK+ A+K++E +  N +I+S+  + E+LLKLV+ K+ +SLA  GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTA++ IKTPIMTCPLL+ K K+DA  +  +++ +TVADI + ME+  +  +V  ++V  I+KL++ L      P       +D+EET+   F+++LEDAI+
Sbjct: 1036 LMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCSEDMLSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMRAVFLRKLEDAIE 1301
[Close]
BLAST of CV090250 vs. TAIR peptide
Match: AT5G60040.2 (| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr5:24173590-24183269 FORWARD LENGTH=1391)

HSP 1 Score: 106.301 bits (264), Expect = 2.063e-23
Identity = 79/243 (32.51%), Postives = 119/243 (48.97%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVH--------QTSFISQFKALAVNQPI-----------IGQKFNHELEFNNYITGLPKLLKENAKKYIEEVKKNKISSEL----------KKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVR-KMKVVTVADITECMEVIDLSAS 641
            L+K LE L V YD TVR+A G I+QFTYG+DG+D            +F   F  +    P            + QKF  EL  ++          ++ ++++  +     S             K+ E  +K+   +Y      AG  +G I AQS+GEP TQMTL TFH AG   MN+T G+PR+ EI+  AS  I TP+++   LE  L+  + R V+ +++  T+  + E +EV+  S S
Sbjct:  893 LMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRHDKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEII-NASKNISTPVISAE-LENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTS 1133
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BLAST of CV090250 vs. TAIR peptide
Match: AT5G60040.1 (| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr5:24173590-24183269 FORWARD LENGTH=1376)

HSP 1 Score: 106.301 bits (264), Expect = 2.063e-23
Identity = 79/243 (32.51%), Postives = 119/243 (48.97%), Query Frame = 3 
Query:    3 LVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDVH--------QTSFISQFKALAVNQPI-----------IGQKFNHELEFNNYITGLPKLLKENAKKYIEEVKKNKISSEL----------KKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEKKLKKDAIRLVR-KMKVVTVADITECMEVIDLSAS 641
            L+K LE L V YD TVR+A G I+QFTYG+DG+D            +F   F  +    P            + QKF  EL  ++          ++ ++++  +     S             K+ E  +K+   +Y      AG  +G I AQS+GEP TQMTL TFH AG   MN+T G+PR+ EI+  AS  I TP+++   LE  L+  + R V+ +++  T+  + E +EV+  S S
Sbjct:  876 LMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRHDKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEII-NASKNISTPVISAE-LENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTS 1116
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BLAST of CV090250 vs. TAIR peptide
Match: AT4G35800.1 (| Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_II_LS | RNA polymerase II large subunit | chr4:16961115-16967892 REVERSE LENGTH=1839)

HSP 1 Score: 88.5817 bits (218), Expect = 4.451e-18
Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:  237 AKKYIEEVKKNKISSELKKPEDLLKLVRQKYISSLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSQIKTPIMTCPLLEK--KLKKDAIRLVRKMKVVTVADITECMEV 623
            +K+ +EE K ++ + E    E     +  +++ SL   GE +G +AAQS+GEP+TQMTLNTFH+AG    NVTLG+PRL+EI+  A  +IKTP ++  L  +  K K+ A  +   ++  T+  +T+  EV
Sbjct: 1048 SKRVLEEYKLSREAFEWVIGE-----IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVA-KRIKTPSLSVYLTPEASKSKEGAKTVQCALEYTTLRSVTQATEV 1172
The following BLAST results are available for this feature:
BLAST of CV090250 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RPA1_YEAST3.340e-3633.76DNA-directed RNA polymerase I subunit RPA1 OS=Sacc... [more]
RPA1_SCHPO3.340e-3634.70DNA-directed RNA polymerase I subunit rpa1 OS=Schi... [more]
RPA1_DICDI1.551e-3335.12DNA-directed RNA polymerase I subunit rpa1 OS=Dict... [more]
RPA1_RAT1.661e-2739.13DNA-directed RNA polymerase I subunit RPA1 OS=Ratt... [more]
RPA1_DROME8.245e-2752.63DNA-directed RNA polymerase I subunit RPA1 OS=Dros... [more]
RPA1_MOUSE3.133e-2637.50DNA-directed RNA polymerase I subunit RPA1 OS=Mus ... [more]
RPA1_HUMAN3.133e-2639.25DNA-directed RNA polymerase I subunit RPA1 OS=Homo... [more]
RPC1_BOVIN2.652e-2532.36DNA-directed RNA polymerase III subunit RPC1 OS=Bo... [more]
RPC1_CHICK1.316e-2432.36DNA-directed RNA polymerase III subunit RPC1 OS=Ga... [more]
RPC1_HUMAN5.002e-2432.36DNA-directed RNA polymerase III subunit RPC1 OS=Ho... [more]
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BLAST of CV090250 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0006s05420.11.906e-4966.25[more]
POPTR_0005s10940.11.473e-1743.81[more]
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BLAST of CV090250 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
ppa000153m3.540e-7456.44[more]
ppa000093m1.367e-1743.81[more]
ppa023322m8.862e-1731.37[more]
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BLAST of CV090250 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7TI03|D7TI03_VITVI6.363e-8664.02Whole genome shotgun sequence of line PN40024, sca... [more]
B9SL65|B9SL65_RICCO1.518e-7961.13DNA-directed RNA polymerase OS=Ricinus communis GN... [more]
D7LVV3|D7LVV3_ARALY3.622e-7356.18Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9SVY0|Q9SVY0_ARATH3.066e-7255.64DNA-directed RNA polymerase OS=Arabidopsis thalian... [more]
A5BD07|A5BD07_VITVI2.514e-6670.22DNA-directed RNA polymerase OS=Vitis vinifera GN=V... [more]
Q69X40|Q69X40_ORYSJ1.059e-5647.64DNA-directed RNA polymerase OS=Oryza sativa subsp.... [more]
C0JAC0|C0JAC0_ORYCO9.598e-5042.86DNA-directed RNA polymerase OS=Oryza coarctata PE=... [more]
C1EFA8|C1EFA8_9CHLO6.662e-4340.87DNA-directed RNA polymerase (Fragment) OS=Micromon... [more]
C1N756|C1N756_MICPS1.256e-4136.33DNA-directed RNA polymerase OS=Micromonas pusilla ... [more]
Q00WA2|Q00WA2_OSTTA1.641e-4138.19DNA-directed RNA polymerase OS=Ostreococcus tauri ... [more]
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BLAST of CV090250 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3
Match NameE-valueIdentityDescription
GSVIVT010333270012.810e-8864.02assembled CDS[more]
GSVIVT010087400014.719e-2733.21assembled CDS[more]
GSVIVT010250790012.056e-1438.61assembled CDS[more]
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BLAST of CV090250 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G57660.11.966e-7455.64| Symbols: NRPA1 | nuclear RNA polymerase A1 | chr... [more]
AT5G60040.22.063e-2332.51| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr... [more]
AT5G60040.12.063e-2332.51| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr... [more]
AT4G35800.14.451e-1839.69| Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 1..260
score: 5.9
IPR015699DNA-directed RNA pol I, largest subunitPANTHERPTHR19376:SF11DNA-DIRECTED RNA POLYMERASE I LARGEST SUBUNITcoord: 1..257
score: 4.2
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 1..257
score: 4.2
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 1..215
score: 2.6
NoneNo IPR availableSEGsegsegcoord: 37..49
score
NoneNo IPR availableSEGsegsegcoord: 14..28
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090250 ID=CV090250; Name=CV090250; organism=Vaccinium corymbosum; type=EST; length=806bp
GCCTGGTAAAAAATCTGGAGTGCCTGAAAGTTTGTTATGACTACACAGTC
CGTGATGCCGATGGTTCTATCATTCAGTTTACTTATGGAGAAGATGGCGT
TGATGTTCACCAAACCAGTTTTATTTCTCAATTTAAAGCACTGGCAGTGA
ATCAACCAATCATTGGACAAAAATTTAATCATGAGCTGGAATTCAATAAT
TACATTACGGGGTTGCCTAAACTCCTCAAGGAGAACGCAAAAAAGTACAT
AGAGGAAGTGAAGAAAAACAAGATATCTTCGGAGCTGAAAAAACCCGAGG
ACTTGCTGAAGTTAGTGAGGCAAAAATACATATCAAGTCTTGCACATGCA
GGGGAACCAGTCGGTGTAATTGCTGCTCAATCTGTTGGTGAACCGTCAAC
CCAGATGACGCTAAACACCTTCCATCATGCTGGGCGTGGAGAAATGAACG
TGACACTTGGTATTCCACGTTTACAGGAGATCTTGATGACTGCATCTAGT
CAGATCAAGACTCCTATAATGACATGTCCATTGCTAGAGAAGAAGTTGAA
AAAGGATGCCATACGCCTTGTGAGAAAAATGAAGGTGGTCACTGTTGCAG
ACATTACAGAGTGCATGGAAGTGATTGATTTGTCAGCATCCGTTGGACCT
CACCAGGTATCTAGGATATATAAGCTTAGGATGAAGCTTAATGGAGACCG
TCTCTCTCCATCTGATGACTATGAGGAGACCCTAGAAGTTTGGTTTGTAA
AAGAACTGGAAGACGCCATACAAATCATTTGGGTTTACTCTCCAGAATCA
ATGGNA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006350transcription
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K02999RPA1; DNA-directed RNA polymerase I subunit A1 [EC:2.7.7.6]
Vocabulary: KEGG PATHWAY
TermDefinition
ko00230Purine metabolism
ko03020RNA polymerase
Vocabulary: INTERPRO
TermDefinition
IPR007081RNA_pol_Rpb1_5
IPR015699DNA-dir_RNA_pol1_lsu_N
noIPRunintegrated