CV090254 | GDV

EST Overview


Name	CV090254
Unique Name	CV090254
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	708

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.304e-67
Identity = 119/168 (70.83%), Postives = 147/168 (87.50%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LP+D+L  IAA FSHP+LQ+ASLVC++WRDALKPLRE+ML +RWGK++KHGRG V+ N +KAL+SFLKGA RGSTLAMVDAGLVYWE GEKE+A+ LYRRA+EL D+ GQCNLGI+YL+ +P NPKEA+KWLK+++ +G++RAQYQLALCLH G  V+ NL EA
Sbjct:   64 DFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEA 231

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: SE1L1_RAT (Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 9.499e-10
Identity = 41/126 (32.54%), Postives = 71/126 (56.35%), Query Frame = 3

Query:  342 GRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGE-----KEEAIQLYRRAAELADSAGQCNLGISYL--RAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV--FNL 692
            GRGV+QN ++A + F   A  G++ AM   G +Y E  +      E A+  +++AA++ +  GQ  LG++YL  R    N   A+K+ ++A+  G +  Q QL    + G GV+++ ++A+  FNL
Sbjct:  387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 512

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: SE1L1_MOUSE (Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 9.499e-10
Identity = 41/126 (32.54%), Postives = 71/126 (56.35%), Query Frame = 3

Query:  342 GRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGE-----KEEAIQLYRRAAELADSAGQCNLGISYL--RAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV--FNL 692
            GRGV+QN ++A + F   A  G++ AM   G +Y E  +      E A+  +++AA++ +  GQ  LG++YL  R    N   A+K+ ++A+  G +  Q QL    + G GV+++ ++A+  FNL
Sbjct:  383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 508

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: SE1L1_HUMAN (Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3)

HSP 1 Score: 63.929 bits (154), Expect = 9.499e-10
Identity = 41/126 (32.54%), Postives = 71/126 (56.35%), Query Frame = 3

Query:  342 GRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGE-----KEEAIQLYRRAAELADSAGQCNLGISYL--RAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV--FNL 692
            GRGV+QN ++A + F   A  G++ AM   G +Y E  +      E A+  +++AA++ +  GQ  LG++YL  R    N   A+K+ ++A+  G +  Q QL    + G GV+++ ++A+  FNL
Sbjct:  387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 512

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: SE1L1_MESAU (Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.241e-9
Identity = 41/126 (32.54%), Postives = 71/126 (56.35%), Query Frame = 3

Query:  342 GRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGE-----KEEAIQLYRRAAELADSAGQCNLGISYL--RAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV--FNL 692
            GRGV+QN ++A + F   A  G++ AM   G +Y E  +      E A+  +++AA++ +  GQ  LG++YL  R    N   A+K+ ++A+  G +  Q QL    + G GV+++ ++A+  FNL
Sbjct:  387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 512

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: K0141_MOUSE (Uncharacterized protein KIAA0141 OS=Mus musculus GN=Kiaa0141 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.161e-7
Identity = 37/126 (29.37%), Postives = 67/126 (53.17%), Query Frame = 3

Query:  324 GKRFKHGRGVKQNTEKALESFLKGAARGSTLAMVD-AGLVYWEMG-----EKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV 683
            G   +HGRG  ++  KA+  +   A +G +LA    A  +    G     E+E A+ L ++AA+   +  Q  LG+ + +    + + AVK+L  A+ +G  ++++ L +C  +G G ++NL EAV
Sbjct:  285 GLCLEHGRGTPRDLSKAILFYHLAAVQGHSLAQYRYARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGVLFTKEPHLDEQRAVKYLWLAASNGDSQSRFHLGICYEKGLGAQRNLGEAV 410

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: K0141_RAT (Uncharacterized protein KIAA0141 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.587e-7
Identity = 36/126 (28.57%), Postives = 68/126 (53.97%), Query Frame = 3

Query:  324 GKRFKHGRGVKQNTEKALESFLKGAARGSTLAMVD-AGLVYWEMG-----EKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV 683
            G   +HGRG  ++  KA+  +   A +G +LA    A  +    G     E++ A+ L ++AA+   +  Q  LG+ + +    + ++AVK+   A+ +G  ++++ L +C  +G GV++NL EAV
Sbjct:  285 GLCLEHGRGTPRDLSKAVLFYHLAAVQGHSLAQYRYARCLLQSPGSMSDPERQRAVSLLKQAADSGLTEAQAFLGVLFTKEPHLDEQKAVKYFWLAASNGDSQSRFHLGICYEKGLGVQRNLGEAV 410

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: K0141_HUMAN (Uncharacterized protein KIAA0141, mitochondrial OS=Homo sapiens GN=KIAA0141 PE=2 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 2.587e-7
Identity = 35/123 (28.46%), Postives = 67/123 (54.47%), Query Frame = 3

Query:  336 KHGRGVKQNTEKALESFLKGAARGSTLA-------MVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV 683
            +HGRG  ++  KA+  +   A++G +LA       ++      W   E++ A+ L ++AA+      Q  LG+ + +    + + AVK+L  A+ +G  +++Y L +C  +G GV++NL EA+
Sbjct:  288 EHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNP-ERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEAL 409

[Close]

BLAST of CV090254 vs. DB:swissprot:display
Match: SE1L2_MOUSE (Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 5.763e-7
Identity = 37/112 (33.04%), Postives = 55/112 (49.11%), Query Frame = 3

Query:  345 RGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMG-----EKEEAIQLYRRAAELADSAGQCNLGISYLRAE--PPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGV 659
            +G+ Q+  KAL  FLK A  GS  AM   G +Y+E           A + +  AA   ++ G   LG+ Y   +  P N  EA+K+ ++A+  G   AQ+QL    + G GV
Sbjct:  312 KGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGV 423

[Close]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05550.2 ()

HSP 1 Score: 254.603 bits (649), Expect = 4.381e-68
Identity = 122/168 (72.62%), Postives = 146/168 (86.90%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LPFD+LT IAA+F+ P+LQ+ASLVC++W + L+PLREAMLFL+WGKRFKHGRG V+ N  KALESFLKGAARGSTLAMVDAGL+YWE+G+K++AI LY +AA+L D +GQCNLG++YL+AEP   KEAVKWL +AS SGH+RAQYQ ALCLHQG GV  NLQEA
Sbjct:   51 DFSKLPFDILTKIAASFTLPNLQAASLVCKSWSEGLRPLREAMLFLKWGKRFKHGRGGVRPNLSKALESFLKGAARGSTLAMVDAGLLYWEIGDKDKAIALYEKAAKLGDRSGQCNLGLAYLQAEPSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEA 218

[Close]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s05550.1 ()

HSP 1 Score: 254.603 bits (649), Expect = 4.381e-68
Identity = 122/168 (72.62%), Postives = 146/168 (86.90%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LPFD+LT IAA+F+ P+LQ+ASLVC++W + L+PLREAMLFL+WGKRFKHGRG V+ N  KALESFLKGAARGSTLAMVDAGL+YWE+G+K++AI LY +AA+L D +GQCNLG++YL+AEP   KEAVKWL +AS SGH+RAQYQ ALCLHQG GV  NLQEA
Sbjct:   51 DFSKLPFDILTKIAASFTLPNLQAASLVCKSWSEGLRPLREAMLFLKWGKRFKHGRGGVRPNLSKALESFLKGAARGSTLAMVDAGLLYWEIGDKDKAIALYEKAAKLGDRSGQCNLGLAYLQAEPSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEA 218

[Close]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s19140.1 ()

HSP 1 Score: 245.743 bits (626), Expect = 2.035e-65
Identity = 117/168 (69.64%), Postives = 145/168 (86.31%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LP D+LT IAA+F+ P LQ+ASLVC++W + L+PLREA+LFL+WGKRFKHGRG V+ N +KAL+SFLKGA RGSTLAMVDAGL+YWE+G+K++AI LY++AA L D +GQCNLG+SYL+AEP   KEAVKWL +AS SGH+RAQYQLALCLHQG G +++L EA
Sbjct:   35 DFSTLPSDILTKIAASFTLPHLQTASLVCKSWSEGLRPLREALLFLKWGKRFKHGRGGVRPNLDKALDSFLKGAVRGSTLAMVDAGLLYWEIGKKDKAIALYKKAAVLGDPSGQCNLGLSYLQAEPSKRKEAVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEA 202

[Close]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0307s00200.2 ()

HSP 1 Score: 67.0106 bits (162), Expect = 1.296e-11
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 3

Query:  546 AEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            AEP   KE VKWL +AS SGH+RAQYQLALCLHQG G +++L EA
Sbjct:    8 AEPSKRKEVVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEA 52

[Close]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0307s00200.1 ()

HSP 1 Score: 67.0106 bits (162), Expect = 1.296e-11
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 3

Query:  546 AEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            AEP   KE VKWL +AS SGH+RAQYQLALCLHQG G +++L EA
Sbjct:    8 AEPSKRKEVVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEA 52

[Close]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s04640.1 ()

HSP 1 Score: 51.9878 bits (123), Expect = 4.313e-7
Identity = 39/127 (30.71%), Postives = 64/127 (50.39%), Query Frame = 3

Query:  324 GKRFKHGRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYW-----EMGEKEEAIQLYRRAAELADSAGQCNLGISYLRA--EPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEAV 683
            G+ +  G GV++N  KALE     A +    A    G +Y      E     +A + + RAA+  D+ G  NLG+ +L+      + K A ++   A+ +G  +A YQLA   H+G G+++NL  A+
Sbjct:  297 GEIYARGAGVERNYTKALEWLTLAAKQQLYSAYNGMGYLYVKGYGVEKKNYTKAKEYFERAADNEDAGGHYNLGVIHLKGIGVKRDVKLACQYFIVAANAGQPKAFYQLAKMFHKGVGLKKNLPMAI 423

[Close]

BLAST of CV090254 vs. P. persica 1.0 peptide
Match: ppa008243m ()

HSP 1 Score: 244.202 bits (622), Expect = 4.179e-65
Identity = 111/169 (65.68%), Postives = 145/169 (85.80%), Query Frame = 3

Query:  177 RDFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            RDFSALP++++ +I  + SHP+L++ASL C++W +AL+PLR+AML++RWGKRFKHGRG V+ N +KAL++FLKGAA GS +AMVDAGL+YWE G K++A+ LY++AA+L D AG+CNLGISYL+ EPPNPKEAVKWL  AS  GH RAQYQLALCLH G GV++N++EA
Sbjct:   56 RDFSALPYELIMIIGVSLSHPNLRAASLACKSWYEALRPLRQAMLYMRWGKRFKHGRGGVQPNMDKALDAFLKGAALGSPMAMVDAGLIYWERGLKDKAVALYQKAADLGDLAGKCNLGISYLQVEPPNPKEAVKWLYHASNEGHTRAQYQLALCLHHGRGVDRNIKEA 224

[Close]

BLAST of CV090254 vs. P. persica 1.0 peptide
Match: ppa002386m ()

HSP 1 Score: 50.447 bits (119), Expect = 8.855e-7
Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 3

Query:  324 GKRFKHGRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYW-----EMGEKEEAIQLYRRAAELADSAGQCNLGISYLRA--EPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            G+ +  G GV++N  KALE     A +    A    G +Y      E     +A + + +AA+  D+ G  NLG+ YL+      + K A ++   A+ +G  +A YQL    H G G+++NL  A
Sbjct:  292 GEIYARGAGVERNYTKALEWLTLAAKQELYSAYNGMGYLYVKGYGVEKKNLTKAKEYFEKAADNEDAGGHYNLGVMYLKGIGVTRDVKLACQYFIVAANAGQPKAFYQLGKMFHTGVGLKKNLPRA 417

[Close]

BLAST of CV090254 vs. TrEMBL
Match: D7KY47|D7KY47_ARALY (F-box family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476189 PE=4 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.349e-67
Identity = 124/168 (73.81%), Postives = 147/168 (87.50%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LPFD+L  IAA FSHP+LQ+AS VC++WRDALKPLRE+ML LRWGK+FKHGRG V+ N +KAL+SFLKGAARGSTLAMVDAGLVYWE GEKE+A+ LYRRAAEL D+ GQCNLGI YL+ +P NPKEA+KWLK+++ +G++RAQYQLALCLHQG  V+ NL EA
Sbjct:   62 DFSMLPFDILMKIAAPFSHPNLQAASSVCKSWRDALKPLRESMLLLRWGKKFKHGRGGVRANLDKALDSFLKGAARGSTLAMVDAGLVYWETGEKEKAMSLYRRAAELGDAVGQCNLGICYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHQGRVVKTNLLEA 229

[Close]

BLAST of CV090254 vs. TrEMBL
Match: B9SPK1|B9SPK1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0024680 PE=4 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.349e-67
Identity = 124/169 (73.37%), Postives = 146/169 (86.39%), Query Frame = 3

Query:  177 RDFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            RDFS LPFD+L  IAA+F+ P+LQ+ASLVCR+WRD L+PLREAM+FL+WGKRFKHGRG V+ N +KAL+SFLKG A GS LAMVDAGLVYWEMG K++AI LY +AAEL D AGQCNLGI Y++ EPP PKEA+KWL +AS +GH+RAQYQLALCLHQG GV+ NLQEA
Sbjct:   45 RDFSTLPFDILIKIAASFTLPNLQTASLVCRSWRDGLRPLREAMVFLKWGKRFKHGRGGVRPNLQKALDSFLKGVALGSPLAMVDAGLVYWEMGFKDKAIALYLKAAELGDPAGQCNLGIYYVQVEPPKPKEAIKWLLQASNAGHVRAQYQLALCLHQGRGVDHNLQEA 213

[Close]

BLAST of CV090254 vs. TrEMBL
Match: B9HTU2|B9HTU2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821879 PE=4 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.670e-66
Identity = 122/168 (72.62%), Postives = 146/168 (86.90%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LPFD+LT IAA+F+ P+LQ+ASLVC++W + L+PLREAMLFL+WGKRFKHGRG V+ N  KALESFLKGAARGSTLAMVDAGL+YWE+G+K++AI LY +AA+L D +GQCNLG++YL+AEP   KEAVKWL +AS SGH+RAQYQ ALCLHQG GV  NLQEA
Sbjct:   51 DFSKLPFDILTKIAASFTLPNLQAASLVCKSWSEGLRPLREAMLFLKWGKRFKHGRGGVRPNLSKALESFLKGAARGSTLAMVDAGLLYWEIGDKDKAIALYEKAAKLGDRSGQCNLGLAYLQAEPSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEA 218

[Close]

BLAST of CV090254 vs. TrEMBL
Match: B9HLR4|B9HLR4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565167 PE=4 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.634e-63
Identity = 117/168 (69.64%), Postives = 145/168 (86.31%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LP D+LT IAA+F+ P LQ+ASLVC++W + L+PLREA+LFL+WGKRFKHGRG V+ N +KAL+SFLKGA RGSTLAMVDAGL+YWE+G+K++AI LY++AA L D +GQCNLG+SYL+AEP   KEAVKWL +AS SGH+RAQYQLALCLHQG G +++L EA
Sbjct:   35 DFSTLPSDILTKIAASFTLPHLQTASLVCKSWSEGLRPLREALLFLKWGKRFKHGRGGVRPNLDKALDSFLKGAVRGSTLAMVDAGLLYWEIGKKDKAIALYKKAAVLGDPSGQCNLGLSYLQAEPSKRKEAVKWLFQASKSGHVRAQYQLALCLHQGCGFDRHLHEA 202

[Close]

BLAST of CV090254 vs. TrEMBL
Match: A5ACX1|A5ACX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023688 PE=4 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.307e-59
Identity = 110/156 (70.51%), Postives = 134/156 (85.90%), Query Frame = 3

Query:  216 IAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            IAA F+ P LQ+ASLVCR+WRD+L+PLREAML L+WGKRFKHG G V+ N +KAL+SFLKGAARGSTLAMVDAGL+YWEMG+KEE++ LYR+AAEL D   QCNLGISYL +EPP  +EA KWL  +S +G++RAQYQLALCLH+G G+++NL EA
Sbjct:   47 IAATFTLPDLQTASLVCRSWRDSLRPLREAMLLLKWGKRFKHGHGGVRPNIQKALDSFLKGAARGSTLAMVDAGLIYWEMGKKEESVALYRKAAELGDPTAQCNLGISYLHSEPPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEA 202

[Close]

BLAST of CV090254 vs. TrEMBL
Match: A9REC1|A9REC1_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_24572 PE=4 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.313e-46
Identity = 94/163 (57.67%), Postives = 117/163 (71.78%), Query Frame = 3

Query:  192 LPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            LPFDVL  IA +FS   L +A+  C+ W  AL PLRE MLFL +GK+FKHG  V +N +KAL+ F KGA RG   AMVDAGL+ WEMG ++E I  Y++AAEL   AG CNLG++YL+ +     EAVKWLK A+ +GH+RAQY LALCL QG GVE N+Q+A
Sbjct:    1 LPFDVLQRIAGSFSWHDLWNATCTCKTWNKALAPLREGMLFLHYGKKFKHGHEVSKNLDKALQMFTKGAIRGCAAAMVDAGLLLWEMGRRDEGINWYKQAAELRHPAGMCNLGLAYLQ-DSNRLVEAVKWLKIAATAGHVRAQYSLALCLQQGKGVECNMQKA 162

[Close]

BLAST of CV090254 vs. TrEMBL
Match: Q7XKU0|Q7XKU0_ORYSJ (OSJNBa0022H21.17 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0022H21.17 PE=4 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 5.530e-37
Identity = 81/176 (46.02%), Postives = 108/176 (61.36%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRGV---------KQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFSALP +++    A      + +AS  CRAWRDAL+PLREA      G+R KH  G          K   ++AL  F + A  GS  AMVDAGL+ WE G ++EA+  Y++AAEL    G CNLG+SYL A+PP  +EAV+W   A+ +G+ RAQY L LCL  G G+++N +EA
Sbjct:   88 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPVGMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREA 263

[Close]

BLAST of CV090254 vs. TrEMBL
Match: Q01IX3|Q01IX3_ORYSA (OSIGBa0106G07.11 protein OS=Oryza sativa GN=OSIGBa0106G07.11 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.530e-37
Identity = 81/176 (46.02%), Postives = 108/176 (61.36%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRGV---------KQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFSALP +++    A      + +AS  CRAWRDAL+PLREA      G+R KH  G          K   ++AL  F + A  GS  AMVDAGL+ WE G ++EA+  Y++AAEL    G CNLG+SYL A+PP  +EAV+W   A+ +G+ RAQY L LCL  G G+++N +EA
Sbjct:   92 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPVGMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREA 267

[Close]

BLAST of CV090254 vs. TrEMBL
Match: B8AVG0|B8AVG0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16304 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.530e-37
Identity = 81/176 (46.02%), Postives = 108/176 (61.36%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRGV---------KQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFSALP +++    A      + +AS  CRAWRDAL+PLREA      G+R KH  G          K   ++AL  F + A  GS  AMVDAGL+ WE G ++EA+  Y++AAEL    G CNLG+SYL A+PP  +EAV+W   A+ +G+ RAQY L LCL  G G+++N +EA
Sbjct:   20 DFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAGAEGRKAERQRALGLFQRAARLGSAAAMVDAGLMCWEEGRRDEAVGCYQKAAELGHPVGMCNLGVSYLEADPPKAEEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREA 195

[Close]

BLAST of CV090254 vs. TrEMBL
Match: B6U9W6|B6U9W6_MAIZE (Sel1-like repeat OS=Zea mays PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.963e-35
Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKH------------------GRGVKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFSALP D++    A      + +AS  CRAW DAL+PLREA     +G+R KH                  G  V+   ++AL  F + A  GS  AMVDAGL+ WE G +EEA+  YR AA+L    G CNLG+SYL A+PP  +EA++W   ++ +G+ RAQY L LCL  G GV++N +EA
Sbjct:   54 DFSALPPDLVHRALAAACASDVAAASRACRAWWDALRPLREAAALHAYGRRVKHDPVTGARAVPAAAASRGGGERVETERQRALGLFRRAARLGSAAAMVDAGLMCWEDGRREEAVGYYRSAADLGHPIGMCNLGVSYLEADPPKAEEAIRWFYPSASAGNARAQYNLGLCLQNGKGVKRNQKEA 238

[Close]

BLAST of CV090254 vs. Vitis vinifera peptide
Match: GSVIVT01004082001 (assembled CDS)

HSP 1 Score: 108.997 bits (271), Expect = 1.791e-24
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 3

Query:  450 MGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            MG+KEE+I LYR+AAEL D   QCNLGISYL +EPP  +EA KWL  +S +G++RAQYQLALCLH+G G+++NL EA
Sbjct:    1 MGKKEESIALYRKAAELGDPTAQCNLGISYLHSEPPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEA 77

[Close]

BLAST of CV090254 vs. TAIR peptide
Match: AT1G70590.1 (| Symbols: | F-box family protein | chr1:26618403-26620159 FORWARD LENGTH=351)

HSP 1 Score: 256.144 bits (653), Expect = 1.325e-68
Identity = 119/168 (70.83%), Postives = 147/168 (87.50%), Query Frame = 3

Query:  180 DFSALPFDVLTMIAANFSHPSLQSASLVCRAWRDALKPLREAMLFLRWGKRFKHGRG-VKQNTEKALESFLKGAARGSTLAMVDAGLVYWEMGEKEEAIQLYRRAAELADSAGQCNLGISYLRAEPPNPKEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            DFS LP+D+L  IAA FSHP+LQ+ASLVC++WRDALKPLRE+ML +RWGK++KHGRG V+ N +KAL+SFLKGA RGSTLAMVDAGLVYWE GEKE+A+ LYRRA+EL D+ GQCNLGI+YL+ +P NPKEA+KWLK+++ +G++RAQYQLALCLH G  V+ NL EA
Sbjct:   64 DFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEA 231

[Close]

BLAST of CV090254 vs. TAIR peptide
Match: AT1G18260.1 (| Symbols: | HCP-like superfamily protein | chr1:6279047-6282008 REVERSE LENGTH=678)

HSP 1 Score: 56.6102 bits (135), Expect = 1.540e-8
Identity = 40/126 (31.75%), Postives = 66/126 (52.38%), Query Frame = 3

Query:  324 GKRFKHGRGVKQNTEKALESFLKGAARGSTLAMVDAGLVY---WEMGEKE--EAIQLYRRAAELADSAGQCNLGISYLRAEPPNP--KEAVKWLKEASVSGHIRAQYQLALCLHQGHGVEQNLQEA 680
            G+ +  G GV++N  KALE     A  G   A    G +Y   + + +K   +A + + +A +  D +G  NLG+ YL+    N   ++A K+   A+ +G  +A YQLA   H G G+++NL+ A
Sbjct:  286 GEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMA 411

The following BLAST results are available for this feature:

BLAST of CV090254 vs. DB:swissprot:display
BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
BLAST of CV090254 vs. P. persica 1.0 peptide
BLAST of CV090254 vs. TrEMBL
BLAST of CV090254 vs. Vitis vinifera peptide
BLAST of CV090254 vs. TAIR peptide

BLAST of CV090254 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
FB84_ARATH	1.304e-67	70.83	F-box protein At1g70590 OS=Arabidopsis thaliana GN...	[more]
SE1L1_RAT	9.499e-10	32.54	Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Se...	[more]
SE1L1_MOUSE	9.499e-10	32.54	Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l P...	[more]
SE1L1_HUMAN	9.499e-10	32.54	Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L P...	[more]
SE1L1_MESAU	1.241e-9	32.54	Protein sel-1 homolog 1 OS=Mesocricetus auratus GN...	[more]
K0141_MOUSE	1.161e-7	29.37	Uncharacterized protein KIAA0141 OS=Mus musculus G...	[more]
K0141_RAT	2.587e-7	28.57	Uncharacterized protein KIAA0141 homolog OS=Rattus...	[more]
K0141_HUMAN	2.587e-7	28.46	Uncharacterized protein KIAA0141, mitochondrial OS...	[more]
SE1L2_MOUSE	5.763e-7	33.04	Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 ...	[more]

BLAST of CV090254 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0010s05550.2	4.381e-68	72.62	[more]
POPTR_0010s05550.1	4.381e-68	72.62	[more]
POPTR_0008s19140.1	2.035e-65	69.64	[more]
POPTR_0307s00200.2	1.296e-11	68.89	[more]
POPTR_0307s00200.1	1.296e-11	68.89	[more]
POPTR_0015s04640.1	4.313e-7	30.71	[more]

BLAST of CV090254 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa008243m	4.179e-65	65.68		[more]
ppa002386m	8.855e-7	30.16		[more]

BLAST of CV090254 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7KY47\|D7KY47_ARALY	1.349e-67	73.81	F-box family protein OS=Arabidopsis lyrata subsp. ...	[more]
B9SPK1\|B9SPK1_RICCO	1.349e-67	73.37	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9HTU2\|B9HTU2_POPTR	5.670e-66	72.62	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HLR4\|B9HLR4_POPTR	2.634e-63	69.64	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5ACX1\|A5ACX1_VITVI	2.307e-59	70.51	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9REC1\|A9REC1_PHYPA	1.313e-46	57.67	Predicted protein (Fragment) OS=Physcomitrella pat...	[more]
Q7XKU0\|Q7XKU0_ORYSJ	5.530e-37	46.02	OSJNBa0022H21.17 protein OS=Oryza sativa subsp. ja...	[more]
Q01IX3\|Q01IX3_ORYSA	5.530e-37	46.02	OSIGBa0106G07.11 protein OS=Oryza sativa GN=OSIGBa...	[more]
B8AVG0\|B8AVG0_ORYSI	5.530e-37	46.02	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6U9W6\|B6U9W6_MAIZE	3.963e-35	43.78	Sel1-like repeat OS=Zea mays PE=2 SV=1	[more]

BLAST of CV090254 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01004082001	1.791e-24	64.94	assembled CDS	[more]

BLAST of CV090254 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G70590.1	1.325e-68	70.83	\| Symbols: \| F-box family protein \| chr1:26618403...	[more]
AT1G18260.1	1.540e-8	31.75	\| Symbols: \| HCP-like superfamily protein \| chr1:...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 101..117 score
None	No IPR available	SEG	seg	seg	coord: 44..62 score
None	No IPR available	GENE3D	1.20.1280.50	no description	coord: 58..94 score: 6.3
None	No IPR available	PANTHER	PTHR11102	SEL-1-LIKE PROTEIN	coord: 43..208 score: 9.2
None	No IPR available	PANTHER	PTHR11102:SF7	SEL-1-LIKE PROTEIN-RELATED	coord: 43..208 score: 9.2
None	No IPR available	SEG	seg	seg	coord: 37..56 score
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 113..230 score: 5.5
None	No IPR available	SEG	seg	seg	coord: 25..48 score
None	No IPR available	SEG	seg	seg	coord: 2..28 score
IPR001810	F-box domain, cyclin-like	PFAM	PF00646	F-box	coord: 61..100 score: 6.6
IPR006597	Sel1-like	PFAM	PF08238	Sel1	coord: 111..135 score: 0.3coord: 151..166 score: 0.15coord: 170..202 score: 0.0028coord: 204..227 score: 0.
IPR006597	Sel1-like	SMART	SM00671	no description	coord: 99..136 score: 0.79coord: 137..168 score: 63coord: 169..202 score: 0.0014coord: 203..232 score
IPR011990	Tetratricopeptide-like helical	GENE3D	1.25.40.10	no description	coord: 95..227 score: 2.2
IPR013026	Tetratricopeptide repeat-containing	PROFILE	PS50293	TPR_REGION	coord: 137..170 score: 10
IPR019734	Tetratricopeptide repeat	PROFILE	PS50005	TPR	coord: 137..170 score: 9
IPR022364	F-box domain, Skp2-like	SUPERFAMILY	81383	F-box domain	coord: 61..96 score: 4.6

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090254 ID=CV090254; Name=CV090254; organism=Vaccinium corymbosum; type=EST; length=708bp
CTCGATCCTGCGCTTCCACCTTCACCTCACTTTCCCTATCACCGAAACCA
ATCTCCAGCAACACCGATCAAAACCACCTCCATCTCTCCCCCAAGCCCAA
GAAGATAACCTCCTCCAATCATTCCCCAAGCTCCAAATCTCGATTCTCTT
CCACCTCCTCCTCCTCATCGACCATCCGCGACTTCTCGGCCCTCCCATTC
GACGTTCTGACGATGATCGCCGCGAATTTCAGCCACCCGAGCCTCCAGTC
GGCGTCGCTTGTGTGCAGGGCGTGGAGGGACGCGCTGAAGCCGCTGAGAG
AGGCCATGTTGTTCCTCCGGTGGGGGAAGCGGTTCAAGCACGGCCGAGGT
GTGAAACAGAACACAGAGAAGGCTCTGGAATCCTTTTTGAAAGGGGCAGC
CCGTGGGTCGACGCTTGCGATGGTTGATGCGGGGCTGGTGTATTGGGAGA
TGGGAGAGAAGGAGGAAGCGATTCAGTTGTATCGGAGAGCAGCAGAGTTG
GCTGATTCTGCTGGGCAGTGCAATTTGGGGATTTCGTACTTGAGAGCTGA
ACCACCAAATCCAAAGGAAGCTGTTAAATGGTTAAAAGAAGCTTCCGTTT
CTGGTCATATCCGTGCACAGTACCAACTCGCCCTATGTTTGCACCAAGGT
CATGGGGTGGAGCAAAATCTACAAGAAGCAGTATTCAACCTTCCACATTT
TCTTCCTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR001810	F-box_dom
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat
IPR022364	F-box domain, Skp2-like