CF811041 | GDV

EST Overview


Name	CF811041
Unique Name	CF811041
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	687

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s19270.1 ()

HSP 1 Score: 100.908 bits (250), Expect = 1.091e-26
Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = -2

Query:  195 DREELRLPHI--VCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 476
            +++E+ L  I  V E+ DVFP +LPGLPP RE++ +IE  PGT  I+  P+ +AP EL ELK QLQE  +  +I+PS SP GAP LFVKK++GTLR
Sbjct:  385 EKKEIELDKIPVVREFPDVFPKELPGLPPEREVEVAIETLPGTIPIAQAPYRMAPAELVELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGTLR 480

HSP 2 Score: 36.965 bits (84), Expect = 1.091e-26
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = -3

Query:  554 LIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTM 676
            +I+ MDWL T+RA +DC  K+VT          FKG+R  +
Sbjct:  316 MILGMDWLVTYRAQIDCFIKMVTLQDEGGRRVEFKGERNVI 356

[Close]

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s01050.1 ()

HSP 1 Score: 76.2554 bits (186), Expect = 2.027e-14
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPG-LPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            ++ ++ DV P  LP  LPPRR ID  IEL PG    S  P+ ++P EL EL+ QL+E  +  +++PS +P GAP LF KK +G+LR
Sbjct:  554 VLQQFEDVMPPQLPKKLPPRRAIDHRIELVPGAKPPSQAPYRMSPKELAELRKQLEELIDSGFVRPSKAPYGAPVLFQKKADGSLR 639

[Close]

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s17950.1 ()

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-13
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = -2

Query:  282 DREELRLPHI--VCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQE 476
            +++E+ L  I  V E+ DVFP +LPGLPP RE++ SIE  PGT  ++  P+ +APTEL  LK QLQE
Sbjct:  460 EKKEIELDKIPVVREFLDVFPKELPGLPPEREVEVSIETLPGTTPVAQAPYRMAPTELVVLKIQLQE 526

HSP 2 Score: 23.483 bits (49), Expect = 1.406e-13
Identity = 11/29 (37.93%), Postives = 15/29 (51.72%), Query Frame = -3

Query:  563 THRAVVDCHQKIVTAXPP*WDMFRFKGDR 649
            T+RA +DC  K VT          F+G+R
Sbjct:  400 TYRAQIDCFTKTVTFQDEGGRRVEFRGER 428

[Close]

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s07060.1 ()

HSP 1 Score: 72.4034 bits (176), Expect = 2.926e-13
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPG-LPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            ++ ++ DV P  LP  LPPRR ID  IEL  G    S  P+ ++P EL EL+ QL+E  +  +++PS +P GAP LF KK +G+LR
Sbjct:  503 VLQQFEDVMPPQLPKKLPPRRAIDHRIELVLGAKPPSQAPYRMSPRELAELRKQLEELIDSGFVRPSKAPYGAPVLFQKKADGSLR 588

[Close]

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s10760.1 ()

HSP 1 Score: 58.151 bits (139), Expect = 5.711e-9
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = -2

Query:  195 EYADVFPDDLP-GLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 440
            E+ +V P DLP GLPP R+I   I+  PG +L +   + + P E + L+ Q++E  E   ++ S SP   PAL V K++G+ R
Sbjct:  620 EFQEVIPSDLPKGLPPVRDIQHQIDFMPGASLPNRPHYRMNPKESQVLQAQVEELIEKGLVQESMSPCAVPALLVPKKDGSWR 702

[Close]

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0012s01930.1 ()

HSP 1 Score: 51.9878 bits (123), Expect = 4.093e-7
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = -2

Query:  195 EYADVFPDDLP-GLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 440
            E+ +V P DLP GLPP R+I   I+  PG +L +   + + P E + L+ Q++E  E   ++ S SP    AL V K +G+ R
Sbjct:  444 EFQEVIPLDLPNGLPPVRDIQHQIDFMPGASLPNRPHYRMNPNESQVLQAQVEELIEKGLVQESMSPCTVLALLVPKNDGSWR 526

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa015000m ()

HSP 1 Score: 108.227 bits (269), Expect = 5.782e-31
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +VCE+ ++FPDDLPGLPP+REI+F+I+  PGT  I   P+ +AP EL+ELK QLQE  +  +I+PS SP GAP LFV+K++GT+R
Sbjct:  530 VVCEFPNIFPDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIRPSVSPWGAPVLFVRKQDGTMR 614

HSP 2 Score: 43.5134 bits (101), Expect = 5.782e-31
Identity = 19/44 (43.18%), Postives = 26/44 (59.09%), Query Frame = -3

Query:  554 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTM 685
            D D+I+ MDWL  H A VDC +K VT   P      F+G+R+ +
Sbjct:  447 DLDIILGMDWLEKHHASVDCFRKEVTLRSPGQPKVTFRGERRVL 490

HSP 3 Score: 42.743 bits (99), Expect = 2.554e-8
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = -2

Query:    3 KKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 113
            +K+K I ++L  AQ RQKSYAD R+K L F  GD VF
Sbjct: 1323 EKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDWVF 1359

HSP 4 Score: 32.3426 bits (72), Expect = 2.554e-8
Identity = 10/34 (29.41%), Postives = 21/34 (61.76%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            YG  CR+ +CW + G+  L + + ++ TT ++ +
Sbjct: 1294 YGRQCRTPICWNEVGDKKLEKVDSIQATTEKVKM 1327

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa022673m ()

HSP 1 Score: 110.153 bits (274), Expect = 2.162e-30
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = -2

Query:  195 ELRLPHI--VCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 467
            ELRL  I  V +++DVFP+DLPGLPP REI+F IEL PGT LIS  P+ +AP EL+ELKTQLQE  +  +I+PS SP GA  LFVKK++GT+R
Sbjct:  595 ELRLEDIPVVQDFSDVFPEDLPGLPPHREIEFVIELAPGTNLISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGALVLFVKKKDGTMR 687

HSP 2 Score: 39.6614 bits (91), Expect = 2.162e-30
Identity = 19/44 (43.18%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  554 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTM 685
            D D+I+ MDWL+ HRA VDC +K V    P      F G R+ +
Sbjct:  520 DLDVILGMDWLARHRASVDCFRKEVVFRSPGRPEVTFYGKRRVL 563

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppb020037m ()

HSP 1 Score: 106.686 bits (265), Expect = 1.055e-29
Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +V ++ DVFP+DLPGLPP+REI+F IEL PGT  IS  P+ +AP EL+ELKTQLQE  +  +I+PS SP GAP LFVKK++G +R
Sbjct:  488 VVQDFPDVFPEDLPGLPPQREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPILFVKKKDGIMR 572

HSP 2 Score: 40.817 bits (94), Expect = 1.055e-29
Identity = 19/44 (43.18%), Postives = 26/44 (59.09%), Query Frame = -3

Query:  554 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTM 685
            D D+I+ MDWL+ HRA VDC +K V    P      F G+R+ +
Sbjct:  405 DLDVILGMDWLARHRASVDCFRKEVVFRSPGRPEVTFYGERRVL 448

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa014973m ()

HSP 1 Score: 106.301 bits (264), Expect = 1.383e-29
Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            I+ ++ DVFP+DLPG+PP+REI+F IEL PGT  IS  P+ +AP EL+ELKTQLQE  +  +I PS SP GAP LFVKK++GT+R
Sbjct:  335 IIQDFPDVFPEDLPGVPPQREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFICPSFSPWGAPVLFVKKKDGTMR 419

HSP 2 Score: 40.817 bits (94), Expect = 1.383e-29
Identity = 19/44 (43.18%), Postives = 26/44 (59.09%), Query Frame = -3

Query:  554 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTM 685
            D D+I+ MDWL+ HRA VDC +K V    P      F G+R+ +
Sbjct:  252 DLDVILGMDWLARHRASVDCFRKEVVFRSPGRHEVTFYGERRVL 295

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa021229m ()

HSP 1 Score: 108.612 bits (270), Expect = 3.031e-29
Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            ++ ++ DVFP+DLPGLPP REI+F IEL PGT  IS  P+ +AP EL+ELKTQLQE  +  +I+PS SP GAP LFVKK++GT+R
Sbjct:  232 VIQDFPDVFPEDLPGLPPHREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPVLFVKKKDGTMR 316

HSP 2 Score: 37.3502 bits (85), Expect = 3.031e-29
Identity = 18/44 (40.91%), Postives = 25/44 (56.82%), Query Frame = -3

Query:  554 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTM 685
            D D+I+ MDWL+ HRA VDC +K V           F G+R+ +
Sbjct:  149 DLDVILGMDWLARHRASVDCFRKEVVFHSLGQPEVTFYGERRVL 192

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa016115m ()

HSP 1 Score: 99.3673 bits (246), Expect = 3.482e-27
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +V ++ DVFP+DLPGLP  REI+F IEL PGT  IS  P+ +AP EL+ELK QLQE  +  +I+ S SP GAP LFVKK++GT+R
Sbjct:  342 VVQDFPDVFPEDLPGLPHHREIEFVIELAPGTNPISQAPYRMAPAELRELKIQLQELVDKGFIRLSFSPWGAPVLFVKKKDGTMR 426

HSP 2 Score: 39.6614 bits (91), Expect = 3.482e-27
Identity = 19/50 (38.00%), Postives = 27/50 (54.00%), Query Frame = -3

Query:  536 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMSPVIRQ 685
            D D+I+ MDWL+ HRA VDC +  V    P      F G+  T   ++R+
Sbjct:  269 DLDVILGMDWLARHRASVDCFRNEVVFRSPGRPKVTFYGEPMTAKRLLRK 318

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa026240m ()

HSP 1 Score: 102.449 bits (254), Expect = 1.002e-26
Identity = 52/85 (61.18%), Postives = 64/85 (75.29%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +V E+ DVFP+DLPGLPP REI+F IEL  GT  IS  P+ +AP EL+ELK QLQE  +  +I PS SP GAP LFVKK++GT+R
Sbjct:  470 VVQEFPDVFPEDLPGLPPHREIEFIIELALGTNPISQAPYRMAPAELRELKMQLQELIDKGFIVPSFSPWGAPVLFVKKKDGTMR 554

HSP 2 Score: 35.039 bits (79), Expect = 1.002e-26
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = -3

Query:  539 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMSPVIR 685
            D D+I+ MDWL+  RA VDC +K V    P  D   + G     + V+R
Sbjct:  416 DLDVILGMDWLARRRASVDCFRKEVVFLVP--DNLNYDGKTIAENRVLR 462

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa024392m ()

HSP 1 Score: 102.834 bits (255), Expect = 2.199e-26
Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = -2

Query:  195 VGKKSDREELRLPHIVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 491
            +  + +R  L    IV E+ +VFP+DLPGLPP REI+F I+L PG   IS  P+ +AP EL+ELK QLQE  +  +I+PS SP G PALFVKK++GT+R
Sbjct:  471 INTRDNRLRLEDIPIVQEFPNVFPEDLPGLPPHREIEFIIKLAPGMNPISQAPYRMAPAELRELKIQLQELVDKGFIRPSFSPWGPPALFVKKKDGTMR 569

HSP 2 Score: 33.4982 bits (75), Expect = 2.199e-26
Identity = 20/65 (30.77%), Postives = 31/65 (47.69%), Query Frame = -3

Query:  491 DFDLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMSPVIRQLKWQNQLFGWLANLR 685
            D D+I+ MDWL+ H A V+C +K V    P      F  +  T   ++  +KW +     + N R
Sbjct:  412 DLDVILWMDWLAKHCASVNCFRKEVVFSSPRRPEVTFYVEPMTAKQLL--IKWCSGYIAHVINTR 474

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa023790m ()

HSP 1 Score: 106.686 bits (265), Expect = 9.995e-24
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +V E+ DVFP+DLPGLPP REI+F IEL PGT  IS   + +APTEL+ELKTQLQE  +  +I+PS SP G P LFVKK++GT+R
Sbjct:  202 VVQEFPDVFPEDLPGLPPHREIEFIIELAPGTNPISQALYRMAPTELRELKTQLQELVDKGFIRPSFSPWGTPVLFVKKKDGTMR 286

[Close]

BLAST of CF811041 vs. P. persica 1.0 peptide
Match: ppa021114m ()

HSP 1 Score: 106.301 bits (264), Expect = 1.305e-23
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +V +++DVFP+DLPGLPP REI+F IEL PGT  IS  P+ +AP +L+ELKTQLQE  +  +I+PS  P GAP LFVKK++GT+R
Sbjct:    3 VVQDFSDVFPEDLPGLPPHREIEFVIELTPGTNPISQAPYRMAPAKLRELKTQLQELVDKGFIRPSFPPWGAPVLFVKKKDGTMR 87

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q4QXS8|Q4QXS8_HORVD (Polyprotein OS=Hordeum vulgare var. distichum PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.989e-24
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = -2

Query:  195 HESGD*TVEMA-EPTVRMAS*SPVGKKSDREELRLPHIVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 557
            H S D  +  A + TVR+ S +  G+ +  E++    +VCEY DVFP++LPG+PP RE++F IEL+PGT  +   P+ + P ELKELK QL E      I+PS+SP G   LFVKK++GT R
Sbjct:  491 HSSEDVIIFAARDDTVRLFSLNEKGEINPIEQVP---VVCEYQDVFPEELPGMPPHREVEFVIELEPGTEPVCKRPYKLGPEELKELKRQLDEQERLGLIRPSSSPWGCGVLFVKKKDGTER 609

HSP 2 Score: 33.113 bits (74), Expect = 3.989e-24
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = -3

Query:  611 DFDLIMEMDWLSTHRAVVDCHQKIV 685
            D DLI+ MDWL+ ++A +DC  K V
Sbjct:  463 DIDLILGMDWLAMNKASIDCEAKEV 487

[Close]

BLAST of CF811041 vs. TrEMBL
Match: A5BBP7|A5BBP7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027150 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.634e-24
Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = -2

Query:  195 GKKSDREELRLPHIVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 488
            GK+  ++++    +V ++ DVFPD+LPGLPP RE DFSIE+ PGT  IS+ P+ +AP ELKELKTQL E     +I+PSTSP GAP LFVKK++GTLR
Sbjct:  586 GKEKAQKDITEIPVVRKFQDVFPDELPGLPPHREFDFSIEVYPGTDPISVSPYRMAPLELKELKTQLDELLGRGFIRPSTSPWGAPVLFVKKKDGTLR 683

HSP 2 Score: 49.2914 bits (116), Expect = 3.717e-12
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = -2

Query:    3 KKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 113
            +KI+ I ++L TAQ RQKSYAD+R +PL F+EGD VF
Sbjct: 1324 EKIQLIKEKLKTAQDRQKSYADKRRRPLEFEEGDWVF 1360

HSP 3 Score: 46.595 bits (109), Expect = 3.717e-12
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            YG PCRS +CW + GE  LL PE+V++TT ++ L
Sbjct: 1295 YGRPCRSPLCWIEMGESRLLGPEIVQETTEKIQL 1328

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q01JF4|Q01JF4_ORYSA (H0502G05.12 protein OS=Oryza sativa GN=H0502G05.12 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.732e-24
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVCEY DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  918 IVCEYPDVFPEELTSMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEIKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 1010

HSP 2 Score: 38.5058 bits (88), Expect = 6.732e-24
Identity = 16/43 (37.21%), Postives = 25/43 (58.14%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T+S
Sbjct:  859 DIILGMDWLAKHKGQIDCAEKTITLQGPGGKQVRFTPNTPTVS 901

HSP 3 Score: 47.3654 bits (111), Expect = 5.843e-7
Identity = 20/38 (52.63%), Postives = 31/38 (81.58%), Query Frame = -2

Query:    3 DKKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 116
            ++++K I +RL TAQ+RQK+YAD R + L F++GDHV+
Sbjct: 1707 EEQVKLIRERLKTAQNRQKNYADNRRRDLEFEKGDHVY 1744

HSP 4 Score: 30.8018 bits (68), Expect = 5.843e-7
Identity = 9/34 (26.47%), Postives = 20/34 (58.82%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            +G  CR+ +CW + GE  +  P++++    ++ L
Sbjct: 1679 FGRKCRTPLCWNEVGEALVFGPDILKSAEEQVKL 1712

[Close]

BLAST of CF811041 vs. TrEMBL
Match: A5JSC4|A5JSC4_MAIZE (Polyprotein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.478e-23
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = -2

Query:  195 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLR 449
            +VCEYADVFPD+LPG+PP R+I+F+IELQPGTA IS  P+ + P EL ELK QLQE  +  +I+PSTSP G PALFVKK++ +LR
Sbjct:  510 VVCEYADVFPDELPGMPPDRDIEFAIELQPGTAPISKRPYRMPPAELAELKKQLQELLDKGFIRPSTSPWGCPALFVKKKDESLR 594

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q2R011|Q2R011_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g44150 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.937e-23
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVCEY DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  544 IVCEYPDVFPEELTSMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 636

HSP 2 Score: 37.3502 bits (85), Expect = 1.937e-23
Identity = 16/43 (37.21%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T S
Sbjct:  485 DIILGMDWLAKHKGQIDCAEKSITLQGPGGKQVRFTPNTPTAS 527

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q109N9|Q109N9_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os10g28724 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.946e-23
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVCEY DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  214 IVCEYPDVFPEELTSMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 306

HSP 2 Score: 37.3502 bits (85), Expect = 1.946e-23
Identity = 16/43 (37.21%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T S
Sbjct:  155 DIILGMDWLAKHKGQIDCAEKSITLQGPRGKQVRFTPNTPTAS 197

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q5W6B6|Q5W6B6_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0037H03.15 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.516e-23
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVC+Y DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  831 IVCKYPDVFPEELTSMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 923

HSP 2 Score: 38.5058 bits (88), Expect = 2.516e-23
Identity = 16/43 (37.21%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T S
Sbjct:  772 DIILGMDWLAKHKGQIDCAEKSITLQGPGGKQVRFTSNTSTAS 814

HSP 3 Score: 48.9062 bits (115), Expect = 1.238e-7
Identity = 21/38 (55.26%), Postives = 31/38 (81.58%), Query Frame = -2

Query:    3 DKKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 116
            D+++K I +RL TAQ+RQK+YAD R + L F++GDHV+
Sbjct: 1514 DEQVKLIRERLKTAQNRQKNYADNRRRDLEFEKGDHVY 1551

HSP 4 Score: 31.5722 bits (70), Expect = 1.238e-7
Identity = 10/34 (29.41%), Postives = 20/34 (58.82%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            +G  CR+ +CW + GE  +  P+M++    ++ L
Sbjct: 1486 FGRKCRTPLCWNEVGEALVFGPDMLKAADEQVKL 1519

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q7XSU3|Q7XSU3_ORYSJ (OSJNBa0039K24.13 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0039K24.13 PE=4 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.269e-23
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVCEY DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  892 IVCEYPDVFPEELTRMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 984

HSP 2 Score: 37.3502 bits (85), Expect = 3.269e-23
Identity = 16/43 (37.21%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T S
Sbjct:  833 DIILGMDWLAKHKGQIDCAEKSITLQGPGGKQVRFTPNTPTAS 875

HSP 3 Score: 47.3654 bits (111), Expect = 7.574e-7
Identity = 20/38 (52.63%), Postives = 31/38 (81.58%), Query Frame = -2

Query:    3 DKKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 116
            ++++K I +RL TAQ+RQK+YAD R + L F++GDHV+
Sbjct: 1681 EEQVKLIRERLKTAQNRQKNYADNRRRDLEFEKGDHVY 1718

HSP 4 Score: 30.4166 bits (67), Expect = 7.574e-7
Identity = 9/34 (26.47%), Postives = 20/34 (58.82%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            +G  CR+ +CW + GE  +  P++++    ++ L
Sbjct: 1653 FGRKCRTPLCWDEVGEALVFGPDILKSAEEQVKL 1686

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q7X726|Q7X726_ORYSA (OSJNBa0089N06.1 protein OS=Oryza sativa GN=OSJNBa0089N06.1 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.269e-23
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVCEY DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  892 IVCEYPDVFPEELTRMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 984

HSP 2 Score: 37.3502 bits (85), Expect = 3.269e-23
Identity = 16/43 (37.21%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T S
Sbjct:  833 DIILGMDWLAKHKGQIDCAEKSITLQGPGGKQVRFTPNTPTAS 875

HSP 3 Score: 47.3654 bits (111), Expect = 7.574e-7
Identity = 20/38 (52.63%), Postives = 31/38 (81.58%), Query Frame = -2

Query:    3 DKKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 116
            ++++K I +RL TAQ+RQK+YAD R + L F++GDHV+
Sbjct: 1681 EEQVKLIRERLRTAQNRQKNYADNRRRDLEFEKGDHVY 1718

HSP 4 Score: 30.4166 bits (67), Expect = 7.574e-7
Identity = 9/34 (26.47%), Postives = 20/34 (58.82%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            +G  CR+ +CW + GE  +  P++++    ++ L
Sbjct: 1653 FGRRCRTPLCWNEVGEALVFGPDILKSAEEQVKL 1686

[Close]

BLAST of CF811041 vs. TrEMBL
Match: Q2QNF0|Q2QNF0_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g38030 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.269e-23
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -2

Query:  171 IVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*GAPALFVKKEEGTLRPPLSIASL 449
            IVCEY DVFP++L  +PP REI+F+IEL PGTA I+  P+ +A  EL E+K Q++E     Y++PS+SP GAP L VKK++G+ R  +   +L
Sbjct:  892 IVCEYPDVFPEELTRMPPDREIEFAIELAPGTAPIAKRPYRMAANELAEVKRQIEELESKGYVRPSSSPWGAPVLLVKKKDGSERMVIDYRAL 984

HSP 2 Score: 37.3502 bits (85), Expect = 3.269e-23
Identity = 16/43 (37.21%), Postives = 24/43 (55.81%), Query Frame = -3

Query:  551 DLIMEMDWLSTHRAVVDCHQKIVTAXPP*WDMFRFKGDRQTMS 679
            D+I+ MDWL+ H+  +DC +K +T   P     RF  +  T S
Sbjct:  833 DIILGMDWLAKHKGQIDCAEKSITLQGPGGKQVRFTPNTPTAS 875

HSP 3 Score: 47.3654 bits (111), Expect = 7.574e-7
Identity = 20/38 (52.63%), Postives = 31/38 (81.58%), Query Frame = -2

Query:    3 DKKIKPI*QRLLTAQSRQKSYADRRNKPLSFKEGDHVF 116
            ++++K I +RL TAQ+RQK+YAD R + L F++GDHV+
Sbjct: 1681 EEQVKLIRERLKTAQNRQKNYADNRRRDLEFEKGDHVY 1718

HSP 4 Score: 30.4166 bits (67), Expect = 7.574e-7
Identity = 9/34 (26.47%), Postives = 20/34 (58.82%), Query Frame = -3

Query:   98 YGHPCRSQVCWTDAGEIGLLEPEMVRDTTRRLSL 199
            +G  CR+ +CW + GE  +  P++++    ++ L
Sbjct: 1653 FGRRCRTPLCWNEVGEALVFGPDILKSAEEQVKL 1686

[Close]

BLAST of CF811041 vs. Vitis vinifera peptide
Match: GSVIVT01018780001 (assembled CDS)

HSP 1 Score: 91.6633 bits (226), Expect = 2.842e-19
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = -2

Query:  237 GKKSDREELRLPHIVCEYADVFPDDLPGLPPRREIDFSIELQPGTALISIVPHHIAPTELKELKTQLQESSE**YIKPSTSP*G 488
            GK+  ++++    +V ++ DVFPD+LPGLPP RE DFSIE+ PGT  IS+ P+ +AP ELKELKTQL E     +I+PSTSP G
Sbjct:  570 GKEKAQKDITEIPMVRKFQDVFPDELPGLPPHREFDFSIEVYPGTDPISVSPYRMAPLELKELKTQLDELLGRGFIRPSTSPWG 653

The following BLAST results are available for this feature:

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
BLAST of CF811041 vs. P. persica 1.0 peptide
BLAST of CF811041 vs. TrEMBL
BLAST of CF811041 vs. Vitis vinifera peptide

BLAST of CF811041 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 6


Match Name	E-value	Identity
POPTR_0004s19270.1	1.091e-26	54.17	[more]
POPTR_0014s01050.1	2.027e-14	46.51	[more]
POPTR_0001s17950.1	1.406e-13	52.24	[more]
POPTR_0015s07060.1	2.926e-13	45.35	[more]
POPTR_0013s10760.1	5.711e-9	38.55	[more]
POPTR_0012s01930.1	4.093e-7	37.35	[more]

BLAST of CF811041 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 10


Match Name	E-value	Identity
ppa015000m	5.782e-31	57.65	[more]
ppa022673m	2.162e-30	62.37	[more]
ppb020037m	1.055e-29	61.18	[more]
ppa014973m	1.383e-29	61.18	[more]
ppa021229m	3.031e-29	61.18	[more]
ppa016115m	3.482e-27	58.82	[more]
ppa026240m	1.002e-26	61.18	[more]
ppa024392m	2.199e-26	53.54	[more]
ppa023790m	9.995e-24	62.35	[more]
ppa021114m	1.305e-23	60.00	[more]

BLAST of CF811041 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q4QXS8\|Q4QXS8_HORVD	3.989e-24	46.72	Polyprotein OS=Hordeum vulgare var. distichum PE=4...	[more]
A5BBP7\|A5BBP7_VITVI	6.634e-24	58.16	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q01JF4\|Q01JF4_ORYSA	6.732e-24	50.54	H0502G05.12 protein OS=Oryza sativa GN=H0502G05.12...	[more]
A5JSC4\|A5JSC4_MAIZE	1.478e-23	64.71	Polyprotein OS=Zea mays PE=4 SV=1	[more]
Q2R011\|Q2R011_ORYSJ	1.937e-23	50.54	Retrotransposon protein, putative, Ty3-gypsy subcl...	[more]
Q109N9\|Q109N9_ORYSJ	1.946e-23	50.54	Retrotransposon protein, putative, Ty3-gypsy subcl...	[more]
Q5W6B6\|Q5W6B6_ORYSJ	2.516e-23	49.46	Putative polyprotein OS=Oryza sativa subsp. japoni...	[more]
Q7XSU3\|Q7XSU3_ORYSJ	3.269e-23	50.54	OSJNBa0039K24.13 protein OS=Oryza sativa subsp. ja...	[more]
Q7X726\|Q7X726_ORYSA	3.269e-23	50.54	OSJNBa0089N06.1 protein OS=Oryza sativa GN=OSJNBa0...	[more]
Q2QNF0\|Q2QNF0_ORYSJ	3.269e-23	50.54	Retrotransposon protein, putative, Ty3-gypsy subcl...	[more]

BLAST of CF811041 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01018780001	2.842e-19	54.76	assembled CDS	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 29..41 score
None	No IPR available	PANTHER	PTHR10178	GAG/POL/ENV POLYPROTEIN	coord: 17..72 score: 1.2
None	No IPR available	PANTHER	PTHR10178:SF14	RETROVIRUS POLYPROTEIN	coord: 17..72 score: 1.2
None	No IPR available	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 16..72 score: 1.4

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811041 ID=CF811041; Name=CF811041; organism=Vaccinium corymbosum; type=EST; length=687bp
AGAAACACGTGGTCTCCCTCTTTGAACGACAATGGTTTGTTTCTTCGATC
CGCATAACTCTTCTGTCGGCTCTGCGCAGTAAGCAATCTCTGTTAGATAG
GCTTAATCTTCTTGTCGTGTCTCTAACCATTTCAGGTTCTAGTAATCCTA
TCTCTCCGGCGTCAGTCCAACAAACTTGCGATCGACAAGGGTGGCCGTAG
GGTTCCTTCTTCCTTCTTCACGAACAGTGCAGGTGCTCCTCATGGTGAAG
TACTCGGTTTGATGTATCATTACTCTGACGACTCTTGTAGTTGGGTCTTC
AATTCCTTCAGTTCTGTTGGCGCTATATGGTGTGGGACTATCGAAATTAG
GGCGGTTCCAGGTTGAAGCTCGATGGAAAAGTCAATCTCCCTTCGTGGCG
GTAATCCAGGTAGATCGTCAGGAAATACGTCAGCATACTCGCAGACGATG
TGTGGCAGTCTTAACTCCTCACGGTCAGATTTTTTTCCAACCGGAGATTA
GCTAGCCATCCGAACAGTTGGTTCTGCCATTTCAACTGTCTAATCACCGG
ACTCATGGTTTGTCTATCCCCCTTAAAACGAAACATGTCCCATCAAGGGG
GGNAAGCCGTTACTATCTTTTGATGGCAATCAACGACAGCTCGATGAGTT
GACAGCCAATCCATCTCCATAATTAAGTCGAAATCAR

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated