CF811409

EST Overview
NameCF811409
Unique NameCF811409
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length404
Libraries
Library NameType
LIBEST_014531 cDNA non acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CF811409 vs. DB:swissprot:display
Match: COPE1_ARATH (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana GN=At1g30630 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.496e-14
Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSRYLNQLKLS+ +H+LVKR +SAE++F+RALQ+ A
Sbjct:  244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292
[Close]
BLAST of CF811409 vs. DB:swissprot:display
Match: COPE2_ORYSJ (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica GN=Os04g0644700 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.954e-14
Identity = 37/49 (75.51%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSL++GKS+SRYLNQLKL++ DH+LVKR+SSAE+SFDRA QAI+
Sbjct:  249 ANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297
[Close]
BLAST of CF811409 vs. DB:swissprot:display
Match: COPE2_ORYSI (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica GN=H0413E07.10 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.954e-14
Identity = 37/49 (75.51%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSL++GKS+SRYLNQLKL++ DH+LVKR+SSAE+SFDRA QAI+
Sbjct:  249 ANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297
[Close]
BLAST of CF811409 vs. DB:swissprot:display
Match: COPE2_ARATH (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana GN=At2g34840 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.353e-14
Identity = 35/49 (71.43%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSR+L+QLKLS+ +HILVKR+SSAE++F+RA+Q +A
Sbjct:  245 ANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293
[Close]
BLAST of CF811409 vs. DB:swissprot:display
Match: COPE1_ORYSJ (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica GN=COPE1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.267e-13
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VC+LH+GK SSRYL+QLKLS+ DH+LVKR  SAE++F+RALQA+A
Sbjct:  239 ANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287
[Close]
BLAST of CF811409 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s15930.1 ()

HSP 1 Score: 79.337 bits (194), Expect = 8.337e-16
Identity = 37/49 (75.51%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLHIGKSSSRYL+QLKLS+ DH+LVKR SSAE++F+RA+Q++A
Sbjct:  242 ANLVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290
[Close]
BLAST of CF811409 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s46330.1 ()

HSP 1 Score: 77.411 bits (189), Expect = 3.168e-15
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            AN  VCSLHIGKSSSRYL+QLKLS+ DH+LVKR SSAE SF+RA+Q++A
Sbjct:  139 ANFVVCSLHIGKSSSRYLSQLKLSHPDHMLVKRTSSAENSFERAVQSVA 187
[Close]
BLAST of CF811409 vs. P. persica 1.0 peptide
Match: ppa009423m ()

HSP 1 Score: 71.633 bits (174), Expect = 1.260e-13
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VC LH+GKS SR+L+QLKL + DH+LVKR ++AEE FDRA+Q++A
Sbjct:  245 ANLVVCYLHLGKSPSRFLSQLKLGHPDHVLVKRAAAAEEGFDRAIQSVA 293
[Close]
BLAST of CF811409 vs. TrEMBL
Match: D7KFM4|D7KFM4_ARALY (Coatomer protein epsilon subunit family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473294 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.046e-13
Identity = 36/49 (73.47%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSRYLNQLKLS+ +H+LVKR++SAE++F+RALQ+ A
Sbjct:  244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRVASAEDNFERALQSFA 292
[Close]
BLAST of CF811409 vs. TrEMBL
Match: B9I0V9|B9I0V9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823128 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.366e-13
Identity = 37/49 (75.51%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLHIGKSSSRYL+QLKLS+ DH+LVKR SSAE++F+RA+Q++A
Sbjct:  242 ANLVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290
[Close]
BLAST of CF811409 vs. TrEMBL
Match: B3H5Z4|B3H5Z4_ARATH (Uncharacterized protein At2g34840.2 OS=Arabidopsis thaliana GN=At2g34840 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.851e-13
Identity = 35/49 (71.43%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSR+L+QLKLS+ +HILVKR+SSAE++F+RA+Q +A
Sbjct:  166 ANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 214
[Close]
BLAST of CF811409 vs. TrEMBL
Match: D7TKQ8|D7TKQ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021747001 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.156e-12
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GK SSRYL+QLKLS+ DH+LV R S+AEE+FDRA+Q IA
Sbjct:  241 ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289
[Close]
BLAST of CF811409 vs. TrEMBL
Match: B3TLU5|B3TLU5_ELAGV (Protein transporter OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.156e-12
Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKS++RYLNQLKLS+ DH+LV+R S AEESF+RA+Q+IA
Sbjct:  241 ANLVVCSLHLGKSAARYLNQLKLSHPDHMLVQRASFAEESFERAVQSIA 289
[Close]
BLAST of CF811409 vs. TrEMBL
Match: A5B5W9|A5B5W9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013598 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.156e-12
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GK SSRYL+QLKLS+ DH+LV R S+AEE+FDRA+Q IA
Sbjct:   77 ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 125
[Close]
BLAST of CF811409 vs. TrEMBL
Match: A9NNT4|A9NNT4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.510e-12
Identity = 34/49 (69.39%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VC+LH+GK ++RYL+QLKLS+ +HIL+K +SSAEESFDRA QA+A
Sbjct:  241 ANLVVCNLHLGKPATRYLSQLKLSHPEHILIKHVSSAEESFDRAFQAVA 289
[Close]
BLAST of CF811409 vs. TrEMBL
Match: B9SV80|B9SV80_RICCO (Coatomer epsilon subunit, putative OS=Ricinus communis GN=RCOM_0771310 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.575e-12
Identity = 35/49 (71.43%), Postives = 45/49 (91.84%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GK SSRYL+QLKLS+ DH+LV+R SSAEE+F+RA+Q++A
Sbjct:  241 ANLIVCSLHLGKPSSRYLSQLKLSHPDHMLVRRSSSAEENFERAVQSVA 289
[Close]
BLAST of CF811409 vs. TrEMBL
Match: B8AU46|B8AU46_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17362 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.575e-12
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VC+LH+GK SSRYL+QLKLS+ DH+LVKR  SAE++F+RALQA+A
Sbjct:  239 ANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287
[Close]
BLAST of CF811409 vs. TrEMBL
Match: B7E599|B7E599_ORYSJ (cDNA clone:001-030-H03, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.575e-12
Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VC+LH+GK SSRYL+QLKLS+ DH+LVKR  SAE++F+RALQA+A
Sbjct:  239 ANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287
[Close]
BLAST of CF811409 vs. Vitis vinifera peptide
Match: GSVIVT01021747001 (assembled CDS)

HSP 1 Score: 76.2554 bits (186), Expect = 4.440e-15
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GK SSRYL+QLKLS+ DH+LV R S+AEE+FDRA+Q IA
Sbjct:  241 ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289
[Close]
BLAST of CF811409 vs. TAIR peptide
Match: AT1G30630.1 (| Symbols: | Coatomer epsilon subunit | chr1:10858546-10860173 REVERSE LENGTH=292)

HSP 1 Score: 78.1814 bits (191), Expect = 1.653e-15
Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSRYLNQLKLS+ +H+LVKR +SAE++F+RALQ+ A
Sbjct:  244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292
[Close]
BLAST of CF811409 vs. TAIR peptide
Match: AT2G34840.2 (| Symbols: | Coatomer epsilon subunit | chr2:14702932-14704165 FORWARD LENGTH=214)

HSP 1 Score: 76.6406 bits (187), Expect = 4.811e-15
Identity = 35/49 (71.43%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSR+L+QLKLS+ +HILVKR+SSAE++F+RA+Q +A
Sbjct:  166 ANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 214
[Close]
BLAST of CF811409 vs. TAIR peptide
Match: AT2G34840.1 (| Symbols: | Coatomer epsilon subunit | chr2:14702603-14704165 FORWARD LENGTH=293)

HSP 1 Score: 76.6406 bits (187), Expect = 4.811e-15
Identity = 35/49 (71.43%), Postives = 46/49 (93.88%), Query Frame = 1 
Query:    1 ANLAVCSLHIGKSSSRYLNQLKLSNSDHILVKRISSAEESFDRALQAIA 147
            ANL VCSLH+GKSSSR+L+QLKLS+ +HILVKR+SSAE++F+RA+Q +A
Sbjct:  245 ANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293
The following BLAST results are available for this feature:
BLAST of CF811409 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
COPE1_ARATH1.496e-1473.47Coatomer subunit epsilon-1 OS=Arabidopsis thaliana... [more]
COPE2_ORYSJ1.954e-1475.51Coatomer subunit epsilon-2 OS=Oryza sativa subsp. ... [more]
COPE2_ORYSI1.954e-1475.51Coatomer subunit epsilon-2 OS=Oryza sativa subsp. ... [more]
COPE2_ARATH4.353e-1471.43Coatomer subunit epsilon-2 OS=Arabidopsis thaliana... [more]
COPE1_ORYSJ1.267e-1371.43Coatomer subunit epsilon-1 OS=Oryza sativa subsp. ... [more]
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BLAST of CF811409 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0011s15930.18.337e-1675.51[more]
POPTR_0001s46330.13.168e-1575.51[more]
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BLAST of CF811409 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa009423m1.260e-1365.31[more]
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BLAST of CF811409 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7KFM4|D7KFM4_ARALY1.046e-1373.47Coatomer protein epsilon subunit family protein OS... [more]
B9I0V9|B9I0V9_POPTR1.366e-1375.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B3H5Z4|B3H5Z4_ARATH8.851e-1371.43Uncharacterized protein At2g34840.2 OS=Arabidopsis... [more]
D7TKQ8|D7TKQ8_VITVI1.156e-1273.47Whole genome shotgun sequence of line PN40024, sca... [more]
B3TLU5|B3TLU5_ELAGV1.156e-1273.47Protein transporter OS=Elaeis guineensis var. tene... [more]
A5B5W9|A5B5W9_VITVI1.156e-1273.47Putative uncharacterized protein OS=Vitis vinifera... [more]
A9NNT4|A9NNT4_PICSI1.510e-1269.39Putative uncharacterized protein OS=Picea sitchens... [more]
B9SV80|B9SV80_RICCO2.575e-1271.43Coatomer epsilon subunit, putative OS=Ricinus comm... [more]
B8AU46|B8AU46_ORYSI2.575e-1271.43Putative uncharacterized protein OS=Oryza sativa s... [more]
B7E599|B7E599_ORYSJ2.575e-1271.43cDNA clone:001-030-H03, full insert sequence OS=Or... [more]
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BLAST of CF811409 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010217470014.440e-1573.47assembled CDS[more]
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BLAST of CF811409 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G30630.11.653e-1573.47| Symbols: | Coatomer epsilon subunit | chr1:1085... [more]
AT2G34840.24.811e-1571.43| Symbols: | Coatomer epsilon subunit | chr2:1470... [more]
AT2G34840.14.811e-1571.43| Symbols: | Coatomer epsilon subunit | chr2:1470... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006822Coatomer, epsilon subunitPANTHERPTHR10805COATOMER EPSILON SUBUNITcoord: 1..49
score: 8.8
IPR006822Coatomer, epsilon subunitPFAMPF04733Coatomer_Ecoord: 1..48
score: 2.6

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811409 ID=CF811409; Name=CF811409; organism=Vaccinium corymbosum; type=EST; length=404bp
GCCAATTTGGCTGTATGTAGTCTTCACATTGGTAAATCATCTTCACGCTA
CTTGAACCAGCTGAAATTGTCAAATTCCGACCACATCCTTGTCAAACGCA
TATCGTCTGCTGAGGAGAGTTTTGACAGAGCACTCCAAGCAATTGCTTGA
AGAAAGTAAGACCTACAGGAACACTGCTTGAATAAATGGGGGAAAAATCG
TTGGTGAAACTTCTTTTGCGAGAGTTTAGATTTATGTTATAGTACTGTTT
TTGTTTCATTTTTTTCGCTTAAGCTTCTTCATTGTCAAAGAAAGCACTGT
TTTTTAAGACTGATTTCTAAAATTGGTGTCTAGATTACATTTGCTTCAGC
TTGTGGATCTCCATTGTATGTAGTTAGCATGAAATGTAACCTGTTTTGTT
TCAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0030126COPI vesicle coat
Vocabulary: INTERPRO
TermDefinition
IPR006822Coatomer_esu