CV090280
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV090280 vs. DB:swissprot:display
Match: SCRL2_ORYSJ (SCAR-like protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0208600 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 7.707e-8 Identity = 62/221 (28.05%), Postives = 95/221 (42.99%), Query Frame = 3 Query: 54 VPMSDQNTSAPCESQ----KSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLT-NTRDGELDTKKPAKWAQ------SSEIMENIFSK------SSTSCHSDKNGSDKKTPWRFL-----PTDLSTKHERYGDSHSSNQLNDDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENE---SQIFGLGNRFLSNGFQRK 641 +P++D + C +Q + + +GV SV WTN L GLEPSKPP F + +D +T P L +T E+ KP + AQ +S I + K STS S+ N S +TP + T ST E S+ N + S + + E++ + S T+++ RN N+ S + RFL+N QR+ Sbjct: 680 MPLNDSLENG-CATQGLPANAPTNSTGVSSVKLWTNAGLFGLEPSKPPVFGAHDGPKED----TTPGHTQPQLCHSTGCPEVHFSKPTESAQVYVPNGNSPITSSFVGKLVGICPGSTSHSSETNQSTVRTPDTVIGQTEGSTGCSTSFEH------SDHKNIIGKQTSISELLESEDSAENGAEMFSKTDMTGRNNMNQVSASSFSSIAQRFLANTLQRR 889
BLAST of CV090280 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s05600.1 () HSP 1 Score: 126.331 bits (316), Expect = 1.989e-29 Identity = 88/228 (38.60%), Postives = 122/228 (53.51%), Query Frame = 3 Query: 45 NPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLTNTRDGELDTKKPAKWAQSSEIMENI-FSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN---DDQVRNSSAVI--RETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQK 710 N + P+SD+ S+ +SQ+S ++ S VQS FWTNG LLGLEPSKPPDF+V N DS TRS D P +T D KP + + + +E+ SK STS H D++ +K E+ GD H N+++ +D +SAV E +H + V I S SQ N EN + G G+R L NGF RKVSLVH + E +++GA +Q+ Sbjct: 509 NAEGPLSDKIISSSNKSQESQNDFSSVQSTTFWTNGGLLGLEPSKPPDFAVSNAKSPDSVTRSKDETGLP-TNHTSMPINDGGKPGRLIKDAGSIESAPTSKGSTSWHDDQD----------------SKVEKPGDFHQGNRISHGYEDGPNITSAVTPGNELQHDSYSKVPPIES---SQENDENSYRRLGFGHRLLVNGFSRKVSLVHDGEREPARLLRSGALEQQ 716
BLAST of CV090280 vs. P. persica 1.0 peptide
Match: ppa000443m () HSP 1 Score: 129.413 bits (324), Expect = 1.673e-30 Identity = 95/257 (36.96%), Postives = 127/257 (49.42%), Query Frame = 3 Query: 3 SVVSNSPSFGFCEPNPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTD--NLANPCLTNTRDGELDTKKPAKWAQSSEIMENIFSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN---DDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQ-----KIRSQMFTDRIF 743 S ++NS S G N K D+ S CESQ+S ++ S S+ FWTNG LLGL+PSKPPDF++ +P+ QDSA RST+ ++N T D EN K +S + + S K+ F T+L K GDS SN + +D ++ ++ + T V A +S E +Q N EN S +FGLG R L NGF RKV H EKSE S AG DQ ++ Q F D F Sbjct: 586 SSLNNSTSCGSGTANAK----DKIISGLCESQESLADISRTNSINFWTNGGLLGLQPSKPPDFTMSSPITQDSAYRSTETVGVSNHAYTLIAD--------------EHEAENAGCKEMSSDYQEDGISPKEISKGFSSTELYPKLGNIGDSPKSNVFSHCMEDGLKKTNTMEPGTLLPV-APCRKSTSNEANQENDENSSLVFGLGRRLLVNGFGRKVPHSHDEKSEPASYSNAGVLDQRNEHHRVEHQAFPDTSF 823
BLAST of CV090280 vs. TrEMBL
Match: B9S9B2|B9S9B2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1015180 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.236e-25 Identity = 79/222 (35.59%), Postives = 123/222 (55.41%), Query Frame = 3 Query: 57 PMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATR-STDNLANPCLTNTRDGELDTKKPAKWAQSSEIME-NIFSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN--DDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQK 710 P+SD+ S C+SQ+ +E + VQ V FWTNG LLGLEPSKPPDF+V N DS TR +++ + +P + + + +P + E ++ S+ S+S H D++ +KT GD H ++ N D + N ++V++ + + D N I T + + N +N SQ+FGLG+R L NGF+RK+SLV + E SS++ A DQ+ Sbjct: 536 PLSDKAVSHSCKSQEPQAELATVQPVSFWTNGGLLGLEPSKPPDFAVANTSNMDSETRINSEVIGHPNHFSMPSNDGERGRPDILVKDDRSTERDLTSERSSSQHKDQDSEVEKT----------------GDFHPVDRFNHADGERHNITSVVK-PGNELPIDAN-IKDTCIGE-NEKNSSQMFGLGHRLLINGFRRKISLVPDSQCEQASSLRTSASDQR 738
BLAST of CV090280 vs. TrEMBL
Match: B9H2I0|B9H2I0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555676 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.023e-18 Identity = 72/194 (37.11%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 45 NPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLTNTRDGELDTKKPAKWAQSSEIMENI-FSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN---DDQVRNSSAVI--RETKHAVTADVNAISSTEVSQRNGENESQIFGLG 608 N + P+SD+ S+ +SQ+S ++ S VQS FWTNG LLGLEPSKPPDF+V N DS TRS D P +T D KP + + + +E+ SK STS H D++ +K E+ GD H N+++ +D +SAV E +H + V I S SQ N EN + G G Sbjct: 509 NAEGPLSDKIISSSNKSQESQNDFSSVQSTTFWTNGGLLGLEPSKPPDFAVSNAKSPDSVTRSKDETGLP-TNHTSMPINDGGKPGRLIKDAGSIESAPTSKGSTSWHDDQD----------------SKVEKPGDFHQGNRISHGYEDGPNITSAVTPGNELQHDSYSKVPPIES---SQENDENSYRRLGFG 682
BLAST of CV090280 vs. TrEMBL
Match: D7TJL3|D7TJL3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021213001 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.553e-11 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3 Query: 3 SVVSNSPSFGFCEPNPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSV 197 SV+SN S N + P D+ S+ CESQ+SS++ S V SV FWTNG LLGLEPSKPPDFSV Sbjct: 444 SVISNLSSSTSPISNSQGPTDDKVRSSFCESQESSADVSSVHSVKFWTNGGLLGLEPSKPPDFSV 508
BLAST of CV090280 vs. TrEMBL
Match: B9I1L8|B9I1L8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728200 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.730e-10 Identity = 63/222 (28.38%), Postives = 89/222 (40.09%), Query Frame = 3 Query: 45 NPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLTNTRDGELDTKKPAKWAQSSEIMENIFSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLNDDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQK 710 N + P+S+++ + SQ+S ++ S V S FWTNG LLGLEPSKPPDF+V N D TR + P D K++ S E + I + + S + K TP S+Q ND+ NSS Q G G+ L NGF RK+SLVH + E ++ +Q+ Sbjct: 464 NVQEPLSNKSIRSSNRSQESQADFSSVHSTTFWTNGGLLGLEPSKPPDFAVSNATSPDYVTR----IEKPG---------DFHHGNKYSPSYEDGQKITTAVTPGNESQHDSDSKVTP------------------IESSQDNDE---NSS-------------------------------QRHGFGHGLLVNGFSRKMSLVHDGECEPTRLLRTSTLEQQ 620
BLAST of CV090280 vs. Vitis vinifera peptide
Match: GSVIVT01021213001 (assembled CDS) HSP 1 Score: 72.4034 bits (176), Expect = 2.070e-13 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3 Query: 3 SVVSNSPSFGFCEPNPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSV 197 SV+SN S N + P D+ S+ CESQ+SS++ S V SV FWTNG LLGLEPSKPPDFSV Sbjct: 444 SVISNLSSSTSPISNSQGPTDDKVRSSFCESQESSADVSSVHSVKFWTNGGLLGLEPSKPPDFSV 508 The following BLAST results are available for this feature:
BLAST of CV090280 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 1
BLAST of CV090280 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV090280 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV090280 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 4
BLAST of CV090280 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV090280 ID=CV090280; Name=CV090280; organism=Vaccinium corymbosum; type=EST; length=755bpback to top |