CV090280

EST Overview
NameCV090280
Unique NameCV090280
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length755
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090280 vs. DB:swissprot:display
Match: SCRL2_ORYSJ (SCAR-like protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0208600 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 7.707e-8
Identity = 62/221 (28.05%), Postives = 95/221 (42.99%), Query Frame = 3
Query:   54 VPMSDQNTSAPCESQ----KSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLT-NTRDGELDTKKPAKWAQ------SSEIMENIFSK------SSTSCHSDKNGSDKKTPWRFL-----PTDLSTKHERYGDSHSSNQLNDDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENE---SQIFGLGNRFLSNGFQRK 641
            +P++D   +  C +Q     + +  +GV SV  WTN  L GLEPSKPP F   +   +D    +T     P L  +T   E+   KP + AQ      +S I  +   K       STS  S+ N S  +TP   +      T  ST  E       S+  N    + S + + E++ +        S T+++ RN  N+   S    +  RFL+N  QR+
Sbjct:  680 MPLNDSLENG-CATQGLPANAPTNSTGVSSVKLWTNAGLFGLEPSKPPVFGAHDGPKED----TTPGHTQPQLCHSTGCPEVHFSKPTESAQVYVPNGNSPITSSFVGKLVGICPGSTSHSSETNQSTVRTPDTVIGQTEGSTGCSTSFEH------SDHKNIIGKQTSISELLESEDSAENGAEMFSKTDMTGRNNMNQVSASSFSSIAQRFLANTLQRR 889          
BLAST of CV090280 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s05600.1 ()

HSP 1 Score: 126.331 bits (316), Expect = 1.989e-29
Identity = 88/228 (38.60%), Postives = 122/228 (53.51%), Query Frame = 3
Query:   45 NPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLTNTRDGELDTKKPAKWAQSSEIMENI-FSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN---DDQVRNSSAVI--RETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQK 710
            N + P+SD+  S+  +SQ+S ++ S VQS  FWTNG LLGLEPSKPPDF+V N    DS TRS D    P   +T     D  KP +  + +  +E+   SK STS H D++                +K E+ GD H  N+++   +D    +SAV    E +H   + V  I S   SQ N EN  +  G G+R L NGF RKVSLVH  + E    +++GA +Q+
Sbjct:  509 NAEGPLSDKIISSSNKSQESQNDFSSVQSTTFWTNGGLLGLEPSKPPDFAVSNAKSPDSVTRSKDETGLP-TNHTSMPINDGGKPGRLIKDAGSIESAPTSKGSTSWHDDQD----------------SKVEKPGDFHQGNRISHGYEDGPNITSAVTPGNELQHDSYSKVPPIES---SQENDENSYRRLGFGHRLLVNGFSRKVSLVHDGEREPARLLRSGALEQQ 716          
BLAST of CV090280 vs. P. persica 1.0 peptide
Match: ppa000443m ()

HSP 1 Score: 129.413 bits (324), Expect = 1.673e-30
Identity = 95/257 (36.96%), Postives = 127/257 (49.42%), Query Frame = 3
Query:    3 SVVSNSPSFGFCEPNPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTD--NLANPCLTNTRDGELDTKKPAKWAQSSEIMENIFSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN---DDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQ-----KIRSQMFTDRIF 743
            S ++NS S G    N K    D+  S  CESQ+S ++ S   S+ FWTNG LLGL+PSKPPDF++ +P+ QDSA RST+   ++N   T   D                  EN   K  +S + +   S K+    F  T+L  K    GDS  SN  +   +D ++ ++ +   T   V A     +S E +Q N EN S +FGLG R L NGF RKV   H EKSE  S   AG  DQ     ++  Q F D  F
Sbjct:  586 SSLNNSTSCGSGTANAK----DKIISGLCESQESLADISRTNSINFWTNGGLLGLQPSKPPDFTMSSPITQDSAYRSTETVGVSNHAYTLIAD--------------EHEAENAGCKEMSSDYQEDGISPKEISKGFSSTELYPKLGNIGDSPKSNVFSHCMEDGLKKTNTMEPGTLLPV-APCRKSTSNEANQENDENSSLVFGLGRRLLVNGFGRKVPHSHDEKSEPASYSNAGVLDQRNEHHRVEHQAFPDTSF 823          
BLAST of CV090280 vs. TrEMBL
Match: B9S9B2|B9S9B2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1015180 PE=4 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.236e-25
Identity = 79/222 (35.59%), Postives = 123/222 (55.41%), Query Frame = 3
Query:   57 PMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATR-STDNLANPCLTNTRDGELDTKKPAKWAQSSEIME-NIFSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN--DDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQK 710
            P+SD+  S  C+SQ+  +E + VQ V FWTNG LLGLEPSKPPDF+V N    DS TR +++ + +P   +    + +  +P    +     E ++ S+ S+S H D++   +KT                GD H  ++ N  D +  N ++V++   + +  D N I  T + + N +N SQ+FGLG+R L NGF+RK+SLV   + E  SS++  A DQ+
Sbjct:  536 PLSDKAVSHSCKSQEPQAELATVQPVSFWTNGGLLGLEPSKPPDFAVANTSNMDSETRINSEVIGHPNHFSMPSNDGERGRPDILVKDDRSTERDLTSERSSSQHKDQDSEVEKT----------------GDFHPVDRFNHADGERHNITSVVK-PGNELPIDAN-IKDTCIGE-NEKNSSQMFGLGHRLLINGFRRKISLVPDSQCEQASSLRTSASDQR 738          
BLAST of CV090280 vs. TrEMBL
Match: B9H2I0|B9H2I0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555676 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.023e-18
Identity = 72/194 (37.11%), Postives = 99/194 (51.03%), Query Frame = 3
Query:   45 NPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLTNTRDGELDTKKPAKWAQSSEIMENI-FSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLN---DDQVRNSSAVI--RETKHAVTADVNAISSTEVSQRNGENESQIFGLG 608
            N + P+SD+  S+  +SQ+S ++ S VQS  FWTNG LLGLEPSKPPDF+V N    DS TRS D    P   +T     D  KP +  + +  +E+   SK STS H D++                +K E+ GD H  N+++   +D    +SAV    E +H   + V  I S   SQ N EN  +  G G
Sbjct:  509 NAEGPLSDKIISSSNKSQESQNDFSSVQSTTFWTNGGLLGLEPSKPPDFAVSNAKSPDSVTRSKDETGLP-TNHTSMPINDGGKPGRLIKDAGSIESAPTSKGSTSWHDDQD----------------SKVEKPGDFHQGNRISHGYEDGPNITSAVTPGNELQHDSYSKVPPIES---SQENDENSYRRLGFG 682          
BLAST of CV090280 vs. TrEMBL
Match: D7TJL3|D7TJL3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021213001 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.553e-11
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3
Query:    3 SVVSNSPSFGFCEPNPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSV 197
            SV+SN  S      N + P  D+  S+ CESQ+SS++ S V SV FWTNG LLGLEPSKPPDFSV
Sbjct:  444 SVISNLSSSTSPISNSQGPTDDKVRSSFCESQESSADVSSVHSVKFWTNGGLLGLEPSKPPDFSV 508          
BLAST of CV090280 vs. TrEMBL
Match: B9I1L8|B9I1L8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728200 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.730e-10
Identity = 63/222 (28.38%), Postives = 89/222 (40.09%), Query Frame = 3
Query:   45 NPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSVVNPVVQDSATRSTDNLANPCLTNTRDGELDTKKPAKWAQSSEIMENIFSKSSTSCHSDKNGSDKKTPWRFLPTDLSTKHERYGDSHSSNQLNDDQVRNSSAVIRETKHAVTADVNAISSTEVSQRNGENESQIFGLGNRFLSNGFQRKVSLVHGEKSESPSSMKAGAFDQK 710
            N + P+S+++  +   SQ+S ++ S V S  FWTNG LLGLEPSKPPDF+V N    D  TR    +  P          D     K++ S E  + I +  +    S  +   K TP                    S+Q ND+   NSS                               Q  G G+  L NGF RK+SLVH  + E    ++    +Q+
Sbjct:  464 NVQEPLSNKSIRSSNRSQESQADFSSVHSTTFWTNGGLLGLEPSKPPDFAVSNATSPDYVTR----IEKPG---------DFHHGNKYSPSYEDGQKITTAVTPGNESQHDSDSKVTP------------------IESSQDNDE---NSS-------------------------------QRHGFGHGLLVNGFSRKMSLVHDGECEPTRLLRTSTLEQQ 620          
BLAST of CV090280 vs. Vitis vinifera peptide
Match: GSVIVT01021213001 (assembled CDS)

HSP 1 Score: 72.4034 bits (176), Expect = 2.070e-13
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3
Query:    3 SVVSNSPSFGFCEPNPKVPMSDQNTSAPCESQKSSSEHSGVQSVMFWTNGSLLGLEPSKPPDFSV 197
            SV+SN  S      N + P  D+  S+ CESQ+SS++ S V SV FWTNG LLGLEPSKPPDFSV
Sbjct:  444 SVISNLSSSTSPISNSQGPTDDKVRSSFCESQESSADVSSVHSVKFWTNGGLLGLEPSKPPDFSV 508          
The following BLAST results are available for this feature:
BLAST of CV090280 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
SCRL2_ORYSJ7.707e-828.05SCAR-like protein 2 OS=Oryza sativa subsp. japonic... [more]
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BLAST of CV090280 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0004s05600.11.989e-2938.60[more]
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BLAST of CV090280 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa000443m1.673e-3036.96[more]
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BLAST of CV090280 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
B9S9B2|B9S9B2_RICCO7.236e-2535.59Putative uncharacterized protein OS=Ricinus commun... [more]
B9H2I0|B9H2I0_POPTR5.023e-1837.11Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TJL3|D7TJL3_VITVI4.553e-1158.46Whole genome shotgun sequence of line PN40024, sca... [more]
B9I1L8|B9I1L8_POPTR1.730e-1028.38Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of CV090280 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010212130012.070e-1358.46assembled CDS[more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090280 ID=CV090280; Name=CV090280; organism=Vaccinium corymbosum; type=EST; length=755bp
AATCTGTTGTCAGTAATTCACCATCTTTTGGGTTCTGTGAACCCAATCCG
AAGGTTCCAATGAGTGATCAAAACACCAGCGCACCTTGCGAATCACAGAA
GTCTTCATCTGAACATTCTGGTGTGCAGTCCGTTATGTTTTGGACAAACG
GGTCCCTCCTTGGACTTGAGCCGTCAAAGCCTCCTGACTTCAGTGTAGTA
AATCCTGTAGTTCAGGACTCTGCGACAAGAAGCACAGATAACTTAGCTAA
TCCATGTTTGACTAATACTCGCGATGGTGAGCTAGACACAAAAAAGCCTG
CTAAGTGGGCCCAGAGTTCAGAAATCATGGAAAATATTTTTTCTAAAAGC
TCCACATCATGTCACAGTGATAAAAATGGATCTGATAAGAAGACACCTTG
GAGATTTTTACCTACTGATCTAAGCACCAAGCATGAAAGATATGGTGATT
CTCATTCTAGCAATCAGTTAAATGATGACCAGGTGCGTAATTCCAGTGCA
GTGATACGTGAAACTAAACATGCAGTCACTGCAGATGTTAATGCCATATC
CTCTACTGAAGTTAGTCAGAGGAATGGTGAAAATGAATCTCAGATTTTTG
GACTTGGCAACAGATTCCTTTCAAATGGTTTTCAAAGAAAAGTCTCACTT
GTCCATGGGGAGAAGTCTGAATCTCCATCCTCCATGAAAGCTGGTGCTTT
TGATCAGAAGATCCGAAGCCAAATGTTTACCGACCGAATTTTTTCACCTT
CTTCC
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