CV091276
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV091276 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s08820.2 () HSP 1 Score: 181.03 bits (458), Expect = 6.426e-46 Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 ++E+K+ EE+ G+SKRN +ST+ +KSLSNQRE+SMALNSEG+EGLIPRAKLLL++GGTFFLGF PLILITVA FS+LY YFGP+FVHD S +PPQYIDPY LLEDERISQ+AP Sbjct: 102 EDEMKIGEEDRGFSKRNPVSTELDKSLSNQREKSMALNSEGIEGLIPRAKLLLTLGGTFFLGFWPLILITVAFFSSLYFYFGPSFVHDGSNASFSPPQYIDPYELLEDERISQIAP 217
BLAST of CV091276 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s08820.1 () HSP 1 Score: 181.03 bits (458), Expect = 6.426e-46 Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 ++E+K+ EE+ G+SKRN +ST+ +KSLSNQRE+SMALNSEG+EGLIPRAKLLL++GGTFFLGF PLILITVA FS+LY YFGP+FVHD S +PPQYIDPY LLEDERISQ+AP Sbjct: 108 EDEMKIGEEDRGFSKRNPVSTELDKSLSNQREKSMALNSEGIEGLIPRAKLLLTLGGTFFLGFWPLILITVAFFSSLYFYFGPSFVHDGSNASFSPPQYIDPYELLEDERISQIAP 223
BLAST of CV091276 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s29660.1 () HSP 1 Score: 165.622 bits (418), Expect = 2.794e-41 Identity = 85/124 (68.55%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLE--------GLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 ++E+K+ EE+ G+SKRN++ST+ +K LS+QRERSMALNSEGLE GLIPRAKLLL+IGG FFLGF PLILI VASFSALY FG +FVHD S P +PPQ+IDPY LLEDERISQ+AP Sbjct: 105 EDEMKIGEEDWGFSKRNSVSTEIDKGLSDQRERSMALNSEGLEVQSWENYLGLIPRAKLLLTIGGAFFLGFWPLILIIVASFSALYSCFGSSFVHDGSDAPTSPPQHIDPYELLEDERISQIAP 228
BLAST of CV091276 vs. P. persica 1.0 peptide
Match: ppa011181m () HSP 1 Score: 181.8 bits (460), Expect = 2.657e-46 Identity = 89/120 (74.17%), Postives = 104/120 (86.67%), Query Frame = 3 Query: 3 YDEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 Y ++ +E+ G+S RNA+ST+ EKSL+NQRERSM LNSEGLEGLIPRA+LLL+IGGTFFLGF PLILITVA FSALY+YFG TF+HD S +PI+PPQYIDPY LLEDERISQ+AP VN Sbjct: 101 YGANDEMGKEDRGFSTRNAVSTEIEKSLANQRERSMQLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVALFSALYLYFGSTFIHDGSSSPISPPQYIDPYELLEDERISQIAPRVN 220
BLAST of CV091276 vs. TrEMBL
Match: D7T3P1|D7T3P1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_88.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037044001 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 8.709e-49 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 +EEIKL EE+ G+SKRNA STD+E +LSNQRERSMALNSEGLEGLIPRAKLLL+IGGTFFLGFGPLILITVA F ALY YFGPTFVHD S+TPI PPQYIDPY LLEDERISQ+AP VN Sbjct: 99 EEEIKL-EEDIGFSKRNAYSTDFEANLSNQRERSMALNSEGLEGLIPRAKLLLTIGGTFFLGFGPLILITVAFFCALYFYFGPTFVHDGSKTPIMPPQYIDPYELLEDERISQIAPRVN 216
BLAST of CV091276 vs. TrEMBL
Match: C6SWH4|C6SWH4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.659e-47 Identity = 93/119 (78.15%), Postives = 107/119 (89.92%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 DEE+ + EE+ G+ KR A+ST+ E+SL NQRERSMALNSEGLEGLIPRAKLLL+IGGTFFLGFGPLILI VA+FSALY YFGPTFVHDAS+ I+PPQY+DPYALLEDERISQ+AP +N Sbjct: 99 DEEVYVNEEDRGFPKRKAVSTNVERSLDNQRERSMALNSEGLEGLIPRAKLLLTIGGTFFLGFGPLILIIVATFSALYFYFGPTFVHDASKMAISPPQYVDPYALLEDERISQIAPRLN 217
BLAST of CV091276 vs. TrEMBL
Match: B9HN28|B9HN28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821303 PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 8.435e-44 Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 ++E+K+ EE+ G+SKRN +ST+ +KSLSNQRE+SMALNSEG+EGLIPRAKLLL++GGTFFLGF PLILITVA FS+LY YFGP+FVHD S +PPQYIDPY LLEDERISQ+AP Sbjct: 108 EDEMKIGEEDRGFSKRNPVSTELDKSLSNQREKSMALNSEGIEGLIPRAKLLLTLGGTFFLGFWPLILITVAFFSSLYFYFGPSFVHDGSNASFSPPQYIDPYELLEDERISQIAP 223
BLAST of CV091276 vs. TrEMBL
Match: B9S7Y6|B9S7Y6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1382800 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.031e-41 Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 3 Query: 6 DEEIKL-KEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 ++E K+ +EE+ G+ KR +ST+++KSL+NQRE SMALNSEGLEGLIPRAKLLL+IGGTFFLGF PLIL+TV FSALY YFG TF+HD S TP++PP YIDPY LLEDERISQ+AP Sbjct: 97 EDEFKIGQEEDRGFFKRKVVSTEFDKSLTNQRETSMALNSEGLEGLIPRAKLLLTIGGTFFLGFWPLILVTVGFFSALYFYFGSTFIHDGSNTPMSPPPYIDPYELLEDERISQIAP 213
BLAST of CV091276 vs. TrEMBL
Match: B9GIN4|B9GIN4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_175587 PE=4 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.117e-41 Identity = 84/116 (72.41%), Postives = 101/116 (87.07%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 ++E+K+ EE+ G+SKRN++ST+ ++ LS+QRERSMALNSEGLEGLIPRAKLLL+IGG FFLGF PLILI VASFSALY FG +FVHD S P +PPQ+IDPY LLEDERISQ+AP Sbjct: 35 EDEMKIGEEDWGFSKRNSVSTEIDRGLSDQRERSMALNSEGLEGLIPRAKLLLTIGGAFFLGFWPLILIIVASFSALYSCFGSSFVHDGSDAPTSPPQHIDPYELLEDERISQIAP 150
BLAST of CV091276 vs. TrEMBL
Match: D7KFU8|D7KFU8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474138 PE=4 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.332e-40 Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = 3 Query: 9 EEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 +EIK +E G SK A S ++KSL NQRERS+ALNSEGLEGLIPRA++LL+IGGTFFLGF PLI++T+ +FSALY+YFG F+HD SRTP++PP YIDPYALLEDERIS M P +N Sbjct: 95 DEIKTDKETGNSSKTTATSPAFDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHDGSRTPVSPPPYIDPYALLEDERISGMNPRLN 212
BLAST of CV091276 vs. TrEMBL
Match: Q9LPM3|Q9LPM3_ARATH (F2J10.10 protein OS=Arabidopsis thaliana GN=At1g50020 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.260e-39 Identity = 80/118 (67.80%), Postives = 98/118 (83.05%), Query Frame = 3 Query: 9 EEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 +EIK +E G SK A + ++KSL NQRERS+ALNSEGLEGLIPRA++LL+IGGTFFLGF PLI++T+ +FSALY+YFG F+HD SRTP++PP YIDPYALLEDERIS M P +N Sbjct: 92 DEIKTGKETGNSSKTTATTPAFDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209
BLAST of CV091276 vs. TrEMBL
Match: Q8LED1|Q8LED1_ARATH (Tubulin alpha-6 chain, putative OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.260e-39 Identity = 80/118 (67.80%), Postives = 98/118 (83.05%), Query Frame = 3 Query: 9 EEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 +EIK +E G SK A + ++KSL NQRERS+ALNSEGLEGLIPRA++LL+IGGTFFLGF PLI++T+ +FSALY+YFG F+HD SRTP++PP YIDPYALLEDERIS M P +N Sbjct: 92 DEIKTGKETGNSSKTTATTPAFDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209
BLAST of CV091276 vs. TrEMBL
Match: B6SR73|B6SR73_MAIZE (Tubulin alpha-6 chain OS=Zea mays PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.442e-35 Identity = 75/116 (64.66%), Postives = 94/116 (81.03%), Query Frame = 3 Query: 24 KEEEGGY----SKRNALSTDYEKSLS--NQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 KE E G +KR +T++E+ + QRERSMALNSEGLEGL+PRAKLLLS+G TFFL FGPLIL+TV+ F+ LY+YFGP+FVHDAS+TP++PP YIDPY LLEDER+S+ +P Sbjct: 80 KEAEEGAPEAGAKRGVAATEFERGAAADGQRERSMALNSEGLEGLVPRAKLLLSLGSTFFLAFGPLILVTVSLFAVLYVYFGPSFVHDASKTPVSPPPYIDPYELLEDERLSRPSP 195
BLAST of CV091276 vs. TrEMBL
Match: B6SQW3|B6SQW3_MAIZE (Tubulin alpha-6 chain OS=Zea mays PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.884e-35 Identity = 71/105 (67.62%), Postives = 90/105 (85.71%), Query Frame = 3 Query: 45 SKRNALSTDYEKSLS--NQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAP 353 +KR +T++E+ + QRERSMALNSEGLEGL+PRAKLLLS+G TFFL FGPLIL+TV+ F+ LY+YFGP+FVHDAS+TP++PP YIDPY LLEDER+S+ +P Sbjct: 72 AKRGVAATEFERGAAADGQRERSMALNSEGLEGLVPRAKLLLSLGSTFFLAFGPLILVTVSLFAVLYVYFGPSFVHDASKTPVSPPPYIDPYELLEDERLSRPSP 176
BLAST of CV091276 vs. Vitis vinifera peptide
Match: GSVIVT01037044001 (assembled CDS) HSP 1 Score: 197.593 bits (501), Expect = 3.992e-51 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 3 Query: 6 DEEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 +EEIKL EE+ G+SKRNA STD+E +LSNQRERSMALNSEGLEGLIPRAKLLL+IGGTFFLGFGPLILITVA F ALY YFGPTFVHD S+TPI PPQYIDPY LLEDERISQ+AP VN Sbjct: 99 EEEIKL-EEDIGFSKRNAYSTDFEANLSNQRERSMALNSEGLEGLIPRAKLLLTIGGTFFLGFGPLILITVAFFCALYFYFGPTFVHDGSKTPIMPPQYIDPYELLEDERISQIAPRVN 216
BLAST of CV091276 vs. Vitis vinifera peptide
Match: GSVIVT01009264001 (assembled CDS) HSP 1 Score: 150.214 bits (378), Expect = 7.309e-37 Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 3 Query: 24 KEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERIS 341 +EE+ G SK N +ST+ E SLSNQRERSMALNSEG+EGL+PRAKLLL+ G TFF+GF P++++TVA FSALY++FGP+F+HD S+T P YIDP LLEDERIS Sbjct: 159 EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIEGLVPRAKLLLATGATFFIGFWPIVVVTVAFFSALYLHFGPSFIHDFSKTHTEPYSYIDPSTLLEDERIS 264
BLAST of CV091276 vs. TAIR peptide
Match: AT1G50020.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18520144-18521600 REVERSE LENGTH=209) HSP 1 Score: 167.162 bits (422), Expect = 8.445e-42 Identity = 80/118 (67.80%), Postives = 98/118 (83.05%), Query Frame = 3 Query: 9 EEIKLKEEEGGYSKRNALSTDYEKSLSNQRERSMALNSEGLEGLIPRAKLLLSIGGTFFLGFGPLILITVASFSALYIYFGPTFVHDASRTPITPPQYIDPYALLEDERISQMAPLVN 362 +EIK +E G SK A + ++KSL NQRERS+ALNSEGLEGLIPRA++LL+IGGTFFLGF PLI++T+ +FSALY+YFG F+HD SRTP++PP YIDPYALLEDERIS M P +N Sbjct: 92 DEIKTGKETGNSSKTTATTPAFDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209 The following BLAST results are available for this feature:
BLAST of CV091276 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 3
BLAST of CV091276 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CV091276 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of CV091276 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
BLAST of CV091276 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV091276 ID=CV091276; Name=CV091276; organism=Vaccinium corymbosum; type=EST; length=726bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|