CV091287 | GDV

EST Overview


Name	CV091287
Unique Name	CV091287
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	802

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV091287 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s14840.1 ()

HSP 1 Score: 185.652 bits (470), Expect = 3.025e-47
Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SL    SCEFFHDP  G+SDEGKVRK+LKVEPL DGSGH FNLSV N ++N++E+I++PVTK EY VL S FN+ LPYLLGW+  A+S +P+D+ R NNA+PR G DYEWSR
Sbjct:  138 RKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGNNASPRYGGDYEWSR 265

[Close]

BLAST of CV091287 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s10260.1 ()

HSP 1 Score: 179.874 bits (455), Expect = 1.660e-45
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTL--ADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SLG  +SCEFFHDP  GRS+EGKVRKVLKVEPL DGSGH FNLSV N  +N++ESI++PVT+ EY VL+S FN+ LPYLLGW+    A+S +  D+ R NN NPR G DY+W+R
Sbjct:  142 RKQVFSLSVTEIGHLVSLGARDSCEFFHDPNKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKALNIDESIYIPVTRAEYTVLISAFNYILPYLLGWHAYANANSIKSADSSRENNVNPRYGGDYDWNR 271

[Close]

BLAST of CV091287 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s04700.1 ()

HSP 1 Score: 74.7146 bits (182), Expect = 7.520e-14
Identity = 34/62 (54.84%), Postives = 49/62 (79.03%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVL 187
            ++Q F+LSATE+G+LIS GP +SCEFFHDP +  S+ G+VRK L ++P +DGSG+  +L+ L
Sbjct:  103 KRQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLNFL 164

[Close]

BLAST of CV091287 vs. P. persica 1.0 peptide
Match: ppa009776m ()

HSP 1 Score: 187.193 bits (474), Expect = 7.390e-48
Identity = 86/128 (67.19%), Postives = 106/128 (82.81%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG+L+ LG  ES EFFHDPF G+SDEGKVRKVLKVEPL DGSGH FNLSV N LIN++ES+++P+T+ E+AVL S FNF LPY+LGW+  A+S +PED+ R NN++ R G D+EWSR
Sbjct:  151 RKQVFSLSVTEIGSLVCLGSKESIEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESVYIPITRAEFAVLKSAFNFILPYILGWHAYANSIKPEDSSRMNNSSSRYGGDFEWSR 278

[Close]

BLAST of CV091287 vs. P. persica 1.0 peptide
Match: ppa011529m ()

HSP 1 Score: 111.694 bits (278), Expect = 3.946e-25
Identity = 50/101 (49.50%), Postives = 77/101 (76.24%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTL 304
            + Q+F+LSATE+G+LISLGP +SCE FHDP +  S+ G+VRK L ++  +DGSG+L +L+V+N L+  +E+  VPVT  E+AV+ +  +F LP+++GW+ L
Sbjct:   82 KNQVFALSATEVGSLISLGPKDSCELFHDPSMKSSNAGQVRKSLSIKCHADGSGYLVSLAVVNNLLKTKENFIVPVTAAEFAVMKTACSFVLPHIMGWDRL 182

[Close]

BLAST of CV091287 vs. TrEMBL
Match: D7KBJ9|D7KBJ9_ARALY (ATWHY1/PTAC1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471615 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.507e-50
Identity = 91/128 (71.09%), Postives = 110/128 (85.94%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            +KQ+FSLS TEIGTL+SLGP ESCEFFHDPF G+SDEGKVRKVLKVEPL DGSGH FNLSV N L+N++ESI++P+T+ E+AVL+S FNF LPYL+GW+  A+S +PEDT R+NNA P  G DYEW+R
Sbjct:  137 KKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEDTNRANNAPPNYGGDYEWNR 264

[Close]

BLAST of CV091287 vs. TrEMBL
Match: Q9M9S3|Q9M9S3_ARATH (F14L17.18 protein OS=Arabidopsis thaliana GN=At1g14410 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.525e-50
Identity = 90/128 (70.31%), Postives = 110/128 (85.94%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            +KQ+FSLS TEIGTL+SLGP ESCEFFHDPF G+SDEGKVRKVLKVEPL DGSGH FNLSV N L+N++ESI++P+T+ E+AVL+S FNF LPYL+GW+  A+S +PE+T R NNA+P  G DYEW+R
Sbjct:  136 KKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of CV091287 vs. TrEMBL
Match: D7TND7|D7TND7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020061001 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.771e-49
Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG+LISLG  ESCEFFHDPF GRS+EGKVRKVLKVEPL DGSGH FNLSV N L+NM+E+I++PVT+ E+AVL+S FNF +PYLLGW+  A+S +P+DT R NNANPRSG D+EWSR
Sbjct:  142 RKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKPDDTSRVNNANPRSG-DFEWSR 268

[Close]

BLAST of CV091287 vs. TrEMBL
Match: Q9LL85|Q9LL85_SOLTU (DNA-binding protein p24 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 6.174e-49
Identity = 92/128 (71.88%), Postives = 109/128 (85.16%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG++ISLG  +SCEFFHDP  GRSDEG+VRKVLKVEPL DGSGH FNLSV N LIN++E+I++PVTK E+AVLVS FNF +PYLLGW+T  +S +PED  RSNNANPRSG + EW+R
Sbjct:  147 RKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWNR 274

[Close]

BLAST of CV091287 vs. TrEMBL
Match: A8MR64|A8MR64_ARATH (Uncharacterized protein At2g02740.2 OS=Arabidopsis thaliana GN=At2g02740 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.346e-48
Identity = 88/128 (68.75%), Postives = 108/128 (84.38%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SLGP ESCEFFHDPF G+ DEGKVRKVLKVEPL DGSG  FNLSV N L+N++ES+++P+TK E+AVL+S FNF LP+L+GW+  A+S +PED+ R NNA+P+ G DYEWSR
Sbjct:  140 RKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 267

[Close]

BLAST of CV091287 vs. TrEMBL
Match: Q66GR6|Q66GR6_ARATH (At2g02740 OS=Arabidopsis thaliana GN=At2g02740 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.986e-47
Identity = 89/129 (68.99%), Postives = 109/129 (84.50%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGR-SDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SLGP ESCEFFHDPF G+ SDEGKVRKVLKVEPL DGSG  FNLSV N L+N++ES+++P+TK E+AVL+S FNF LP+L+GW+  A+S +PED+ R NNA+P+ G DYEWSR
Sbjct:  140 RKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CV091287 vs. TrEMBL
Match: D7LQ57|D7LQ57_ARALY (ATWHY3/PTAC11 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484180 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.388e-47
Identity = 89/129 (68.99%), Postives = 108/129 (83.72%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGR-SDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SLGP ESCEFFHDPF G+ SDEGKVRKVLKVEPL DGSG  FNLSV N L+N++ES+++P+TK E+AVL+S FNF LP+L+GW+  A+S +PED  R NNA+P+ G DYEWSR
Sbjct:  140 RKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFILPHLIGWSAFANSIKPEDANRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CV091287 vs. TrEMBL
Match: B9S2A9|B9S2A9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0697810 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.425e-47
Identity = 90/128 (70.31%), Postives = 106/128 (82.81%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIGT+ISLG  +SCEFFHDP  G+SDEGK+RKVLKVEPL DGSGH FNLSV N  +NM+ESI++PVTK E+AVL+S FN+ LPYLLGW+T A+S +P+     NNANPR G DYEWSR
Sbjct:  144 RKQVFSLSVTEIGTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWSR 271

[Close]

BLAST of CV091287 vs. TrEMBL
Match: Q0WLJ4|Q0WLJ4_ARATH (Putative uncharacterized protein At2g02740 OS=Arabidopsis thaliana GN=At2g02740 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.287e-46
Identity = 87/129 (67.44%), Postives = 109/129 (84.50%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGR-SDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            +K++FSLS TEIG L+SLGP ESCEFFHDPF G+ SDEGKVRKVLKVEPL DGSG  FNLSV N L+N++ES+++P+TK E+AVL+S FNF LP+L+GW+  A+S +PED+ R NNA+P+ G DYEWSR
Sbjct:  140 KKRVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CV091287 vs. TrEMBL
Match: A9PDN0|A9PDN0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1085328 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.141e-45
Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SL    SCEFFHDP  G+SDEGKVRK+LKVEPL DGSGH FNLSV N ++N++E+I++PVTK EY VL S FN+ LPYLLGW+  A+S +P+D+ R NNA+PR G DYEWSR
Sbjct:  138 RKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGNNASPRYGGDYEWSR 265

[Close]

BLAST of CV091287 vs. Vitis vinifera peptide
Match: GSVIVT01020061001 (assembled CDS)

HSP 1 Score: 199.519 bits (506), Expect = 1.226e-51
Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG+LISLG  ESCEFFHDPF GRS+EGKVRKVLKVEPL DGSGH FNLSV N L+NM+E+I++PVT+ E+AVL+S FNF +PYLLGW+  A+S +P+DT R NNANPRSG D+EWSR
Sbjct:  142 RKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKPDDTSRVNNANPRSG-DFEWSR 268

[Close]

BLAST of CV091287 vs. Vitis vinifera peptide
Match: GSVIVT01037137001 (assembled CDS)

HSP 1 Score: 97.8265 bits (242), Expect = 5.024e-21
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            +KQ F+LSA E+G+L+SL P   CEFFHDP +  S+ G+VRK L V+ + DG  +  +LSV+N +    E + VP+T  E+AV+ +  +FALP++LGW+   +   P        A P +    EW R
Sbjct:  113 KKQFFALSAVEVGSLLSLSPGGGCEFFHDPSMKTSNAGQVRKSLSVKSM-DGGSYFLSLSVVNNIQKTNERLAVPLTAAEFAVMQTACSFALPHILGWDRYMNQKLPR-----TEATPST---LEWDR 231

[Close]

BLAST of CV091287 vs. TAIR peptide
Match: AT1G14410.1 (| Symbols: ATWHY1, PTAC1, WHY1 | ssDNA-binding transcriptional regulator | chr1:4929352-4930810 REVERSE LENGTH=263)

HSP 1 Score: 201.06 bits (510), Expect = 6.117e-52
Identity = 90/128 (70.31%), Postives = 110/128 (85.94%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            +KQ+FSLS TEIGTL+SLGP ESCEFFHDPF G+SDEGKVRKVLKVEPL DGSGH FNLSV N L+N++ESI++P+T+ E+AVL+S FNF LPYL+GW+  A+S +PE+T R NNA+P  G DYEW+R
Sbjct:  136 KKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of CV091287 vs. TAIR peptide
Match: AT2G02740.2 (| Symbols: ATWHY3, PTAC11, WHY3 | ssDNA-binding transcriptional regulator | chr2:769389-770993 FORWARD LENGTH=267)

HSP 1 Score: 196.438 bits (498), Expect = 1.507e-50
Identity = 88/128 (68.75%), Postives = 108/128 (84.38%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SLGP ESCEFFHDPF G+ DEGKVRKVLKVEPL DGSG  FNLSV N L+N++ES+++P+TK E+AVL+S FNF LP+L+GW+  A+S +PED+ R NNA+P+ G DYEWSR
Sbjct:  140 RKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 267

[Close]

BLAST of CV091287 vs. TAIR peptide
Match: AT2G02740.1 (| Symbols: ATWHY3, PTAC11, WHY3 | ssDNA-binding transcriptional regulator | chr2:769389-770993 FORWARD LENGTH=268)

HSP 1 Score: 193.356 bits (490), Expect = 1.276e-49
Identity = 89/129 (68.99%), Postives = 109/129 (84.50%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGR-SDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPEDTRRSNNANPRSGVDYEWSR 385
            RKQ+FSLS TEIG L+SLGP ESCEFFHDPF G+ SDEGKVRKVLKVEPL DGSG  FNLSV N L+N++ES+++P+TK E+AVL+S FNF LP+L+GW+  A+S +PED+ R NNA+P+ G DYEWSR
Sbjct:  140 RKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CV091287 vs. TAIR peptide
Match: AT1G71260.1 (| Symbols: ATWHY2, WHY2 | WHIRLY 2 | chr1:26861849-26863391 REVERSE LENGTH=238)

HSP 1 Score: 115.546 bits (288), Expect = 3.380e-26
Identity = 56/130 (43.08%), Postives = 85/130 (65.38%), Query Frame = 2

Query:    2 RKQIFSLSATEIGTLISLGPTESCEFFHDPFIGRSDEGKVRKVLKVEPLSDGSGHLFNLSVLNMLINMEESIFVPVTKGEYAVLVSLFNFALPYLLGWNTLADSARPE--DTRRSNNANPRSGVDYEWSR 385
            +KQ F+LS TE+G+LIS+G  +S EFFHDP +  S+ G+VRK L V+P +DGSG+  +LSV N ++   +   VPVTK E+AV+ + F+FALP+++GWN L      E   +R  ++      ++ EW +
Sbjct:  109 KKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLELEWDK 238

The following BLAST results are available for this feature:

BLAST of CV091287 vs. Populus trichocarpa peptide v2.0
BLAST of CV091287 vs. P. persica 1.0 peptide
BLAST of CV091287 vs. TrEMBL
BLAST of CV091287 vs. Vitis vinifera peptide
BLAST of CV091287 vs. TAIR peptide

BLAST of CV091287 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0008s14840.1	3.025e-47	67.19	[more]
POPTR_0010s10260.1	1.660e-45	65.38	[more]
POPTR_0003s04700.1	7.520e-14	54.84	[more]

BLAST of CV091287 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa009776m	7.390e-48	67.19		[more]
ppa011529m	3.946e-25	49.50		[more]

BLAST of CV091287 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7KBJ9\|D7KBJ9_ARALY	2.507e-50	71.09	ATWHY1/PTAC1 OS=Arabidopsis lyrata subsp. lyrata G...	[more]
Q9M9S3\|Q9M9S3_ARATH	9.525e-50	70.31	F14L17.18 protein OS=Arabidopsis thaliana GN=At1g1...	[more]
D7TND7\|D7TND7_VITVI	2.771e-49	73.44	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q9LL85\|Q9LL85_SOLTU	6.174e-49	71.88	DNA-binding protein p24 OS=Solanum tuberosum PE=1 ...	[more]
A8MR64\|A8MR64_ARATH	2.346e-48	68.75	Uncharacterized protein At2g02740.2 OS=Arabidopsis...	[more]
Q66GR6\|Q66GR6_ARATH	1.986e-47	68.99	At2g02740 OS=Arabidopsis thaliana GN=At2g02740 PE=...	[more]
D7LQ57\|D7LQ57_ARALY	3.388e-47	68.99	ATWHY3/PTAC11 OS=Arabidopsis lyrata subsp. lyrata ...	[more]
B9S2A9\|B9S2A9_RICCO	4.425e-47	70.31	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q0WLJ4\|Q0WLJ4_ARATH	1.287e-46	67.44	Putative uncharacterized protein At2g02740 OS=Arab...	[more]
A9PDN0\|A9PDN0_POPTR	4.141e-45	67.19	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of CV091287 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01020061001	1.226e-51	73.44	assembled CDS	[more]
GSVIVT01037137001	5.024e-21	40.63	assembled CDS	[more]

BLAST of CV091287 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G14410.1	6.117e-52	70.31	\| Symbols: ATWHY1, PTAC1, WHY1 \| ssDNA-binding tra...	[more]
AT2G02740.2	1.507e-50	68.75	\| Symbols: ATWHY3, PTAC11, WHY3 \| ssDNA-binding tr...	[more]
AT2G02740.1	1.276e-49	68.99	\| Symbols: ATWHY3, PTAC11, WHY3 \| ssDNA-binding tr...	[more]
AT1G71260.1	3.380e-26	43.08	\| Symbols: ATWHY2, WHY2 \| WHIRLY 2 \| chr1:26861849...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	no description	coord: 1..107 score: 1.1
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 1..128 score: 6.1
IPR013742	Plant transcription factor	PFAM	PF08536	Whirly	coord: 1..88 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091287 ID=CV091287; Name=CV091287; organism=Vaccinium corymbosum; type=EST; length=802bp
GAGGAAGCAGATTTTCTCATTGTCAGCAACGGAAATTGGAACTCTAATTA
GCCTTGGGCCAACGGAATCGTGTGAATTCTTTCACGATCCTTTTATTGGG
AGAAGTGATGAAGGTAAAGTGAGAAAGGTGTTAAAAGTAGAGCCCCTTTC
GGATGGCTCTGGTCACCTCTTCAATCTCAGTGTTCTAAACATGCTTATAA
ACATGGAGGAAAGCATTTTCGTCCCTGTTACCAAAGGGGAGTATGCAGTT
CTAGTCTCATTATTCAACTTTGCTTTGCCATACCTTTTGGGTTGGAACAC
CTTAGCTGATTCTGCAAGGCCAGAAGATACCAGACGTTCGAACAATGCTA
ATCCAAGATCTGGCGTAGACTACGAGTGGAGCAGGTAGAATAGAAGAGTC
TTCACTGTCAGGTTCCCTTACTATGGGGCAGAGAATGGCCTTCCCATTTT
GTCATCTTCTTGACTGTGGGTTACTTGTTTATTTTGCAAGTCTGGGGAAA
CCTTCCTGTTTTCTGATTTGGTTTGTTTCGTTGTCTGTTGTGATGAAAAC
CCTTTTCTATATCGTTGTAGAGGTTAGACTGGATTATCGAGTAGCTGTTT
TATGGACAAGTCAGTGAACAGATTACCACATGCTACTGTGTCTGTGTTCT
CATCCCTTTCTTGGCTAAGACCTGATACTGTTTGTTTGAGACACTGAAAA
CGAGTCTGTGGTAAGTGCTTGCTCTCTGGTAAGTTTTGGTCCTGTCACCT
GACTGTTAGTCGAGTTTTGCGGTCGTGAGCTAGCTGATGGTGCGGCTCAN
TT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009044	ssDNA-bd_transcriptional_reg
IPR013742	Whirly