CF811556

EST Overview
NameCF811556
Unique NameCF811556
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length461
Libraries
Library NameType
LIBEST_014531 cDNA non acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s25220.1 ()

HSP 1 Score: 125.176 bits (313), Expect = 1.824e-29
Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 3
Query:   45 MDEFW--RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272
            M++++  R H+PAFGSWD N++  +PFTQCFESARQAGLLRY+YSEDRDLYVAGDLYENDVVTP MIVVPRRR K RR
Sbjct:    1 MEDYYYSRSHVPAFGSWDWNND--MPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVVTPTMIVVPRRREKMRR 76          
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s04940.1 ()

HSP 1 Score: 61.6178 bits (148), Expect = 2.476e-10
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 3
Query:   45 MDEFWR-GHIPAFGSWD-CNDEYGLPFTQCFESARQAGLLRYTYSEDRDL---YVAGDLYENDVVTPAMIVVPRRRAKAR--RYPH 281
            MDE+ R G IPAFG+WD  ND   LPFT  FESARQAGL+R++ +   +    Y+  DL+ +D   P+   VP R+ + R  R PH
Sbjct:    1 MDEWRRSGQIPAFGNWDQAND---LPFTLYFESARQAGLIRHSTNSSGECGHRYMRSDLHASDFNKPSRYHVPPRKTRMREQRGPH 83          
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s04510.1 ()

HSP 1 Score: 58.151 bits (139), Expect = 2.738e-9
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 3
Query:   45 MDEFWR-GHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRD-----LYVAGDLYENDVVTPAMIVVP--RRRAKARRYPH 281
            MDE+ R G IPAFG+WD  +E  LP TQ FESARQAGL+R++ + +         + GDLY +D+  P+  + P  + R + +R  H
Sbjct:    1 MDEWRRSGQIPAFGNWDQANE--LPITQYFESARQAGLIRFSTTHNSSGECGHQDMRGDLYASDINKPSRNLPPPVKTRMREKRGTH 85          
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s04360.1 ()

HSP 1 Score: 52.373 bits (124), Expect = 1.502e-7
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 3
Query:   57 WR--GHIPAFGSWD-CNDEYGLPFTQCFESARQAGLLRYTYSEDRDL---YVAGDLYENDVVTPAMIVVPRRR 257
            WR  G IPAFG+WD  ND   LP T  FESARQAGL++++ +   +    Y+  DL+ +D   P+   VP R+
Sbjct:    1 WRRSGQIPAFGNWDQAND---LPITLYFESARQAGLIQHSTNSSGECVHRYMRSDLHASDFNKPSRYHVPPRK 70          
BLAST of CF811556 vs. P. persica 1.0 peptide
Match: ppa012975m ()

HSP 1 Score: 112.464 bits (280), Expect = 8.769e-26
Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYT-YS-EDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272
            R  +PAFGSWD N +  LPFTQCFESA QAGLLRYT YS EDRDLYVAGDLYENDVVTPAMIVVPRRR K+R+
Sbjct:    9 RSQVPAFGSWDWNQD--LPFTQCFESATQAGLLRYTSYSDEDRDLYVAGDLYENDVVTPAMIVVPRRRNKSRQ 79          
BLAST of CF811556 vs. P. persica 1.0 peptide
Match: ppa012256m ()

HSP 1 Score: 51.6026 bits (122), Expect = 1.837e-7
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 3
Query:   63 GHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYS--EDRDLYV-AGDLY 209
            G IPAFG WD  +E  LP TQ FE ARQAGL+R++ S  E  D YV + DLY
Sbjct:   10 GQIPAFGDWDYANE--LPITQYFECARQAGLIRFSSSSGESADAYVRSADLY 59          
BLAST of CF811556 vs. TrEMBL
Match: D7U6E7|D7U6E7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_333.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006232001 PE=4 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.038e-29
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 3
Query:   45 MDEFWRGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAK 263
            MDE+ R H+PAFGSWDCND+  LPFTQCFESARQAGLLRY+YSEDRDLYVAGDLY+NDV+TPAMIVVPRR  +
Sbjct:    1 MDEYKRSHVPAFGSWDCNDD--LPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYQNDVMTPAMIVVPRRTTR 71          
BLAST of CF811556 vs. TrEMBL
Match: B9SMN3|B9SMN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1626710 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.500e-28
Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 3
Query:   45 MDEFW--RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272
            M++++  R H+PAFGSWD N++  LPFTQCFESARQAGLLRY+YSEDRDLYVAGDLYENDVVTPAMIVVPRRRAK R+
Sbjct:    1 MEDYYYSRNHVPAFGSWDWNND--LPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKVRQ 76          
BLAST of CF811556 vs. TrEMBL
Match: B9GR78|B9GR78_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_756336 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.117e-27
Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 3
Query:   45 MDEFW--RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272
            M++++  R H+PAFGSWD N++  +PFTQCFESARQAGLLRY+YSEDRDLYVAGDLYENDVVTP MIVVPRRR K RR
Sbjct:    1 MEDYYYSRSHVPAFGSWDWNND--MPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVVTPTMIVVPRRREKMRR 76          
BLAST of CF811556 vs. TrEMBL
Match: C6SYN7|C6SYN7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.588e-25
Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSE--DRDLYVAGDLYENDVVTPAMIVVPRRRAKAR 269
            R H+PAFGSWD ND   LPFTQCFE+ARQAGLLRY+YSE  DRDLYV GDLYENDVVTPAMIVVPRRR K R
Sbjct:    8 RHHVPAFGSWDWNDN--LPFTQCFETARQAGLLRYSYSESEDRDLYVTGDLYENDVVTPAMIVVPRRREKVR 77          
BLAST of CF811556 vs. TrEMBL
Match: C6T7H1|C6T7H1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.736e-21
Identity = 54/70 (77.14%), Postives = 59/70 (84.29%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSE--DRDLYVAGDLYENDVVTPAMIVVPRRRAK 263
            +  +PAFGSWD ND   L FTQCFESARQAGLLR +YSE  +RDLYV GDLYEN+VVTPAMIVVPRRRAK
Sbjct:    8 KSQVPAFGSWDWNDN--LHFTQCFESARQAGLLRCSYSESEERDLYVTGDLYENNVVTPAMIVVPRRRAK 75          
BLAST of CF811556 vs. TrEMBL
Match: Q9LV64|Q9LV64_ARATH (Gb|AAD28645.1 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.594e-17
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRY-TYSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278
            RGH+PAFGSWD ND   +PFTQCFE+A  +Q   L Y +Y +DRDLY+AGDLY+N  +V PA+I+VPRRRAK  + P
Sbjct:   13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87          
BLAST of CF811556 vs. TrEMBL
Match: Q8LEL0|Q8LEL0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g48500 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.594e-17
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRY-TYSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278
            RGH+PAFGSWD ND   +PFTQCFE+A  +Q   L Y +Y +DRDLY+AGDLY+N  +V PA+I+VPRRRAK  + P
Sbjct:   13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87          
BLAST of CF811556 vs. TrEMBL
Match: D7MM20|D7MM20_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494911 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.387e-17
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRYT-YSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278
            RGH+PAFGSWD ND   +PFTQCFE+A  +Q   L Y  Y +DRDLY+AGDLY+N  +V PA+I+VPRRRAK  + P
Sbjct:   13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYAPYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87          
BLAST of CF811556 vs. TrEMBL
Match: B9I5T3|B9I5T3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571148 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.874e-8
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 3
Query:   45 MDEFWR-GHIPAFGSWD-CNDEYGLPFTQCFESARQAGLLRYTYSEDRDL---YVAGDLYENDVVTPAMIVVPRRRAKAR--RYPH 281
            MDE+ R G IPAFG+WD  ND   LPFT  FESARQAGL+R++ +   +    Y+  DL+ +D   P+   VP R+ + R  R PH
Sbjct:    1 MDEWRRSGQIPAFGNWDQAND---LPFTLYFESARQAGLIRHSTNSSGECGHRYMRSDLHASDFNKPSRYHVPPRKTRMREQRGPH 83          
BLAST of CF811556 vs. TrEMBL
Match: C6TJ82|C6TJ82_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.433e-7
Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 3
Query:   63 GHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSE-DRDLYVAG--DLYENDVVTPAMIVVPRRRAKARR 272
            G IPAFG+WD  +E  LP TQ FESARQAGL+RY+ S  + D YV    DLY  D   P   + P    KA R
Sbjct:    5 GQIPAFGNWDYANE--LPITQYFESARQAGLVRYSSSSGESDPYVRADRDLYAVDFKKPIRNIPPSTLKKATR 75          
BLAST of CF811556 vs. Vitis vinifera peptide
Match: GSVIVT01006232001 (assembled CDS)

HSP 1 Score: 130.568 bits (327), Expect = 2.683e-31
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 3
Query:   45 MDEFWRGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAK 263
            MDE+ R H+PAFGSWDCND+  LPFTQCFESARQAGLLRY+YSEDRDLYVAGDLY+NDV+TPAMIVVPRR  +
Sbjct:    1 MDEYKRSHVPAFGSWDCNDD--LPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYQNDVMTPAMIVVPRRTTR 71          
BLAST of CF811556 vs. TAIR peptide
Match: AT5G48500.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19653235-19654017 FORWARD LENGTH=167)

HSP 1 Score: 91.6633 bits (226), Expect = 1.941e-19
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3
Query:   60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRY-TYSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278
            RGH+PAFGSWD ND   +PFTQCFE+A  +Q   L Y +Y +DRDLY+AGDLY+N  +V PA+I+VPRRRAK  + P
Sbjct:   13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87          
The following BLAST results are available for this feature:
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
POPTR_0002s25220.11.824e-2976.92[more]
POPTR_0013s04940.12.476e-1046.51[more]
POPTR_0019s04510.12.738e-942.53[more]
POPTR_0015s04360.11.502e-743.84[more]
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BLAST of CF811556 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
ppa012975m8.769e-2680.82[more]
ppa012256m1.837e-757.69[more]
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BLAST of CF811556 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7U6E7|D7U6E7_VITVI5.038e-2982.19Whole genome shotgun sequence of line PN40024, sca... [more]
B9SMN3|B9SMN3_RICCO2.500e-2879.49Putative uncharacterized protein OS=Ricinus commun... [more]
B9GR78|B9GR78_POPTR2.117e-2776.92Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6SYN7|C6SYN7_SOYBN2.588e-2581.94Putative uncharacterized protein OS=Glycine max PE... [more]
C6T7H1|C6T7H1_SOYBN1.736e-2177.14Putative uncharacterized protein OS=Glycine max PE... [more]
Q9LV64|Q9LV64_ARATH2.594e-1761.04Gb|AAD28645.1 OS=Arabidopsis thaliana PE=4 SV=1[more]
Q8LEL0|Q8LEL0_ARATH2.594e-1761.04Putative uncharacterized protein OS=Arabidopsis th... [more]
D7MM20|D7MM20_ARALY3.387e-1761.04Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9I5T3|B9I5T3_POPTR2.874e-846.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6TJ82|C6TJ82_SOYBN2.433e-750.68Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of CF811556 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010062320012.683e-3182.19assembled CDS[more]
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BLAST of CF811556 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G48500.11.941e-1961.04| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 33..44
score
NoneNo IPR availableSEGsegsegcoord: 80..115
score
NoneNo IPR availableSEGsegsegcoord: 25..41
score: NAcoord: 50..58
score
NoneNo IPR availableSEGsegsegcoord: 15..27
score: NAcoord: 31..43
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF811556 ID=CF811556; Name=CF811556; organism=Vaccinium corymbosum; type=EST; length=461bp
ATCTCTCCAAAATTCTTCAGAGCCACCCATCAAATTCCCTCTGAATGGAT
GAGTTTTGGAGAGGGCATATACCGGCTTTTGGAAGCTGGGATTGCAACGA
CGAGTACGGACTCCCTTTCACTCAGTGTTTCGAATCGGCGAGGCAAGCCG
GGTTGCTTCGGTACACTTACTCTGAGGATCGTGATTTGTACGTCGCCGGT
GACTTGTACGAGAATGACGTCGTCACTCCGGCCATGATCGTCGTTCCTCG
CCGTAGGGCAAAAGCACGTCGTTACCCGCATGTGAAAGAAGCAAAAAAGG
AGGAATGGGTGGTGAANGAACCACCCAGCCCTGTTTCGCTGCCAACGCCG
CCGCCACCACCGCCGCCGCGAAAAGCTCCAAAAGCAGTGGATGAAGATCT
CTACAAGATCTCACGGGAGCTCCCTCCGCGCCAAAACCCAAAANGAAAAA
NAGGACTGGGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated