CF811556
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s25220.1 () HSP 1 Score: 125.176 bits (313), Expect = 1.824e-29 Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 3 Query: 45 MDEFW--RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272 M++++ R H+PAFGSWD N++ +PFTQCFESARQAGLLRY+YSEDRDLYVAGDLYENDVVTP MIVVPRRR K RR Sbjct: 1 MEDYYYSRSHVPAFGSWDWNND--MPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVVTPTMIVVPRRREKMRR 76
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s04940.1 () HSP 1 Score: 61.6178 bits (148), Expect = 2.476e-10 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 45 MDEFWR-GHIPAFGSWD-CNDEYGLPFTQCFESARQAGLLRYTYSEDRDL---YVAGDLYENDVVTPAMIVVPRRRAKAR--RYPH 281 MDE+ R G IPAFG+WD ND LPFT FESARQAGL+R++ + + Y+ DL+ +D P+ VP R+ + R R PH Sbjct: 1 MDEWRRSGQIPAFGNWDQAND---LPFTLYFESARQAGLIRHSTNSSGECGHRYMRSDLHASDFNKPSRYHVPPRKTRMREQRGPH 83
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s04510.1 () HSP 1 Score: 58.151 bits (139), Expect = 2.738e-9 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 45 MDEFWR-GHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRD-----LYVAGDLYENDVVTPAMIVVP--RRRAKARRYPH 281 MDE+ R G IPAFG+WD +E LP TQ FESARQAGL+R++ + + + GDLY +D+ P+ + P + R + +R H Sbjct: 1 MDEWRRSGQIPAFGNWDQANE--LPITQYFESARQAGLIRFSTTHNSSGECGHQDMRGDLYASDINKPSRNLPPPVKTRMREKRGTH 85
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s04360.1 () HSP 1 Score: 52.373 bits (124), Expect = 1.502e-7 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 3 Query: 57 WR--GHIPAFGSWD-CNDEYGLPFTQCFESARQAGLLRYTYSEDRDL---YVAGDLYENDVVTPAMIVVPRRR 257 WR G IPAFG+WD ND LP T FESARQAGL++++ + + Y+ DL+ +D P+ VP R+ Sbjct: 1 WRRSGQIPAFGNWDQAND---LPITLYFESARQAGLIQHSTNSSGECVHRYMRSDLHASDFNKPSRYHVPPRK 70
BLAST of CF811556 vs. P. persica 1.0 peptide
Match: ppa012975m () HSP 1 Score: 112.464 bits (280), Expect = 8.769e-26 Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYT-YS-EDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272 R +PAFGSWD N + LPFTQCFESA QAGLLRYT YS EDRDLYVAGDLYENDVVTPAMIVVPRRR K+R+ Sbjct: 9 RSQVPAFGSWDWNQD--LPFTQCFESATQAGLLRYTSYSDEDRDLYVAGDLYENDVVTPAMIVVPRRRNKSRQ 79
BLAST of CF811556 vs. P. persica 1.0 peptide
Match: ppa012256m () HSP 1 Score: 51.6026 bits (122), Expect = 1.837e-7 Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 63 GHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYS--EDRDLYV-AGDLY 209 G IPAFG WD +E LP TQ FE ARQAGL+R++ S E D YV + DLY Sbjct: 10 GQIPAFGDWDYANE--LPITQYFECARQAGLIRFSSSSGESADAYVRSADLY 59
BLAST of CF811556 vs. TrEMBL
Match: D7U6E7|D7U6E7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_333.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006232001 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.038e-29 Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 3 Query: 45 MDEFWRGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAK 263 MDE+ R H+PAFGSWDCND+ LPFTQCFESARQAGLLRY+YSEDRDLYVAGDLY+NDV+TPAMIVVPRR + Sbjct: 1 MDEYKRSHVPAFGSWDCNDD--LPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYQNDVMTPAMIVVPRRTTR 71
BLAST of CF811556 vs. TrEMBL
Match: B9SMN3|B9SMN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1626710 PE=4 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.500e-28 Identity = 62/78 (79.49%), Postives = 71/78 (91.03%), Query Frame = 3 Query: 45 MDEFW--RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272 M++++ R H+PAFGSWD N++ LPFTQCFESARQAGLLRY+YSEDRDLYVAGDLYENDVVTPAMIVVPRRRAK R+ Sbjct: 1 MEDYYYSRNHVPAFGSWDWNND--LPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKVRQ 76
BLAST of CF811556 vs. TrEMBL
Match: B9GR78|B9GR78_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_756336 PE=4 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.117e-27 Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 3 Query: 45 MDEFW--RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAKARR 272 M++++ R H+PAFGSWD N++ +PFTQCFESARQAGLLRY+YSEDRDLYVAGDLYENDVVTP MIVVPRRR K RR Sbjct: 1 MEDYYYSRSHVPAFGSWDWNND--MPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVVTPTMIVVPRRREKMRR 76
BLAST of CF811556 vs. TrEMBL
Match: C6SYN7|C6SYN7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.588e-25 Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSE--DRDLYVAGDLYENDVVTPAMIVVPRRRAKAR 269 R H+PAFGSWD ND LPFTQCFE+ARQAGLLRY+YSE DRDLYV GDLYENDVVTPAMIVVPRRR K R Sbjct: 8 RHHVPAFGSWDWNDN--LPFTQCFETARQAGLLRYSYSESEDRDLYVTGDLYENDVVTPAMIVVPRRREKVR 77
BLAST of CF811556 vs. TrEMBL
Match: C6T7H1|C6T7H1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.736e-21 Identity = 54/70 (77.14%), Postives = 59/70 (84.29%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSE--DRDLYVAGDLYENDVVTPAMIVVPRRRAK 263 + +PAFGSWD ND L FTQCFESARQAGLLR +YSE +RDLYV GDLYEN+VVTPAMIVVPRRRAK Sbjct: 8 KSQVPAFGSWDWNDN--LHFTQCFESARQAGLLRCSYSESEERDLYVTGDLYENNVVTPAMIVVPRRRAK 75
BLAST of CF811556 vs. TrEMBL
Match: Q9LV64|Q9LV64_ARATH (Gb|AAD28645.1 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.594e-17 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRY-TYSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278 RGH+PAFGSWD ND +PFTQCFE+A +Q L Y +Y +DRDLY+AGDLY+N +V PA+I+VPRRRAK + P Sbjct: 13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87
BLAST of CF811556 vs. TrEMBL
Match: Q8LEL0|Q8LEL0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g48500 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.594e-17 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRY-TYSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278 RGH+PAFGSWD ND +PFTQCFE+A +Q L Y +Y +DRDLY+AGDLY+N +V PA+I+VPRRRAK + P Sbjct: 13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87
BLAST of CF811556 vs. TrEMBL
Match: D7MM20|D7MM20_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494911 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.387e-17 Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRYT-YSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278 RGH+PAFGSWD ND +PFTQCFE+A +Q L Y Y +DRDLY+AGDLY+N +V PA+I+VPRRRAK + P Sbjct: 13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYAPYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87
BLAST of CF811556 vs. TrEMBL
Match: B9I5T3|B9I5T3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571148 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.874e-8 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 45 MDEFWR-GHIPAFGSWD-CNDEYGLPFTQCFESARQAGLLRYTYSEDRDL---YVAGDLYENDVVTPAMIVVPRRRAKAR--RYPH 281 MDE+ R G IPAFG+WD ND LPFT FESARQAGL+R++ + + Y+ DL+ +D P+ VP R+ + R R PH Sbjct: 1 MDEWRRSGQIPAFGNWDQAND---LPFTLYFESARQAGLIRHSTNSSGECGHRYMRSDLHASDFNKPSRYHVPPRKTRMREQRGPH 83
BLAST of CF811556 vs. TrEMBL
Match: C6TJ82|C6TJ82_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.433e-7 Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 3 Query: 63 GHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSE-DRDLYVAG--DLYENDVVTPAMIVVPRRRAKARR 272 G IPAFG+WD +E LP TQ FESARQAGL+RY+ S + D YV DLY D P + P KA R Sbjct: 5 GQIPAFGNWDYANE--LPITQYFESARQAGLVRYSSSSGESDPYVRADRDLYAVDFKKPIRNIPPSTLKKATR 75
BLAST of CF811556 vs. Vitis vinifera peptide
Match: GSVIVT01006232001 (assembled CDS) HSP 1 Score: 130.568 bits (327), Expect = 2.683e-31 Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 3 Query: 45 MDEFWRGHIPAFGSWDCNDEYGLPFTQCFESARQAGLLRYTYSEDRDLYVAGDLYENDVVTPAMIVVPRRRAK 263 MDE+ R H+PAFGSWDCND+ LPFTQCFESARQAGLLRY+YSEDRDLYVAGDLY+NDV+TPAMIVVPRR + Sbjct: 1 MDEYKRSHVPAFGSWDCNDD--LPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYQNDVMTPAMIVVPRRTTR 71
BLAST of CF811556 vs. TAIR peptide
Match: AT5G48500.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19653235-19654017 FORWARD LENGTH=167) HSP 1 Score: 91.6633 bits (226), Expect = 1.941e-19 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 60 RGHIPAFGSWDCNDEYGLPFTQCFESA--RQAGLLRY-TYSEDRDLYVAGDLYEN-DVVTPAMIVVPRRRAKARRYP 278 RGH+PAFGSWD ND +PFTQCFE+A +Q L Y +Y +DRDLY+AGDLY+N +V PA+I+VPRRRAK + P Sbjct: 13 RGHVPAFGSWDWND--AVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLVAPAVIIVPRRRAKVGQEP 87 The following BLAST results are available for this feature:
BLAST of CF811556 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 4
BLAST of CF811556 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of CF811556 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of CF811556 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CF811556 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF811556 ID=CF811556; Name=CF811556; organism=Vaccinium corymbosum; type=EST; length=461bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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