DW043099

EST Overview
NameDW043099
Unique NameDW043099
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length506
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of DW043099 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 35.4242 bits (80), Expect = 9.967e-7
Identity = 24/58 (41.38%), Postives = 30/58 (51.72%), Query Frame = -1 
Query:  225 FNHFLSWGPQATRVRREFQTNQELSPLGRAFVAAYRPWNYPNGQDVVTQISNGGIPWF 398
            F+ F   GP   R+      N  L+ +G  FVAA        G+DV  QI+NGGIPWF
Sbjct:   85 FDVFAFSGPAPERI------NGRLAMIG--FVAAIAV-ELSKGEDVFAQIANGGIPWF 133

HSP 2 Score: 31.187 bits (69), Expect = 9.967e-7
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = -2 
Query:  176 FVLTSGVLSVASLIPQF 226
            FVLT+GVLSVASLIP F
Sbjct:  133 FVLTTGVLSVASLIPLF 149

HSP 3 Score: 28.8758 bits (63), Expect = 9.967e-7
Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = -3 
Query:   91 FFSADAEMCNGRLAMVG 141
            F+S+DAEM NGR AM+G
Sbjct:  161 FWSSDAEMWNGRFAMLG 177
The following BLAST results are available for this feature:
BLAST of DW043099 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
B2BJD6|B2BJD6_RHOCT9.967e-741.38Early light-induced protein 7 OS=Rhododendron cata... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 70..79
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043099 ID=DW043099; Name=DW043099; organism=Vaccinium corymbosum; type=EST; length=506bp
TAAAATACACCTAAATTTTCATACAGAGTGGACCTACACAAGGGGCCCCA
CACTTAATAGCAAAACTACGGTGAAGGCCAGTGCAAATAAACCCACCATA
GCTAATCTACCATTACACATCTCAGCATCAGCGCTAAAGAACTATTTTGA
CTTTGACTCCAACACTAACTCCACTAAACTGAGGAATCAAAGATGCTACG
GATAGCACACCGGAAGTCAGCACAAAACCACGGGATCCCACCGTTGGATA
TCTGAGTAACCACATCCTGACCATTGGGATAGTTCCACGGCCTATATGCT
GCCACAAAAGCCCGACCCAATGGGCTAAGTTCCTGGTTGGTTTGAAATTC
CCTCCTAACCCGGGTGGCCTGGGGCCCCCAACTTAAAAAATGGTTGAAAC
CCACGGTCCGAAATGGGAAAATCCCGGTTGCCCTGAACCCTCCCGGCCCT
TTTTGGGGGAACCAACCGTTGGAACCGGGAGTTTTCCTAACTTTTCACCT
TTTCTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated