DW043284 | GDV

EST Overview


Name	DW043284
Unique Name	DW043284
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	621

Libraries


Library Name	Type
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosum	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of DW043284 vs. DB:swissprot:display
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 3.268e-10
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = -3

Query:  260 PHPATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRISPRVRMCLPQISRAVGFPVVFDMYPCVHIRRHSLIPYVPVE*GVESKSNRVFQS 583
            P PA   PP      K+ T   F   + +SGPAPERINGRLAMIGFV+     I+ + +    Q+S   G  V + +   V +   SLIP+      VESKS  +  S
Sbjct:   73 PQPAYTRPP------KMSTK--FSDLMAFSGPAPERINGRLAMIGFVAAMGVEIA-KGQGLSEQLS---GGGVAWFLGTSVLLSLASLIPFFQGV-SVESKSKSIMSS 167

HSP 2 Score: 37.3502 bits (85), Expect = 3.268e-10
Identity = 17/24 (70.83%), Postives = 18/24 (75.00%), Query Frame = -2

Query:  186 DAELWNGRFAMVGLVALAVTRIGK 257
            DAE WNGR AM+GLVALA T   K
Sbjct:  168 DAEFWNGRIAMLGLVALAFTEFVK 191

[Close]

BLAST of DW043284 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s15780.1 ()

HSP 1 Score: 45.4394 bits (106), Expect = 2.275e-11
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = -3

Query:  419 PVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 559
            P  P   KV T   F   L +SGPAPERINGRLAMIGFV+  +  +S
Sbjct:   61 PSPPPKPKVSTK--FADVLAFSGPAPERINGRLAMIGFVAAMAVELS 105

HSP 2 Score: 40.4318 bits (93), Expect = 2.275e-11
Identity = 28/75 (37.33%), Postives = 38/75 (50.67%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTF--FDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVT 416
            KG+D+F+  I +GG+        L +       F  + +     GV         DAE+WNGRFAM+GLVALA T
Sbjct:  106 KGQDLFS-QISNGGVSWFVGTSILLSVASLIPLFKGVSAESKSEGVMTS------DAEMWNGRFAMLGLVALACT 173

[Close]

BLAST of DW043284 vs. P. persica 1.0 peptide
Match: ppa011739m ()

HSP 1 Score: 49.2914 bits (116), Expect = 8.774e-14
Identity = 29/67 (43.28%), Postives = 35/67 (52.24%), Query Frame = -3

Query:  419 EEPGREGRKXRNPHPATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 619
            E+P       R P P     P   +  KV T   F     +SGPAPERINGRLAM+GFVS  +  +S
Sbjct:   57 EQPSTTPEASRIPPPPPTPTPSPKRSPKVSTK--FSDVFAFSGPAPERINGRLAMVGFVSALAVELS 121

HSP 2 Score: 44.2838 bits (103), Expect = 8.774e-14
Identity = 34/78 (43.59%), Postives = 40/78 (51.28%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP-GFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KG+DVFA  I  GG+      + L T       S+     G  V+ K  G    DAELWNGR AM+GLVALA T   K
Sbjct:  122 KGQDVFA-QISDGGVS-----LFLATSILLSVASVIPLFKGVSVESKSDGIMTSDAELWNGRLAMLGLVALAFTEYVK 193

[Close]

BLAST of DW043284 vs. P. persica 1.0 peptide
Match: ppa011747m ()

HSP 1 Score: 47.3654 bits (111), Expect = 4.206e-13
Identity = 26/60 (43.33%), Postives = 32/60 (53.33%), Query Frame = -3

Query:  440 EEPGREGRKXRNPHPATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 619
            E+P       + P P     P   +  K+ T   F     +SGPAPERINGRLAM+GFVS
Sbjct:   57 EQPSTAPEASKIPPPPPTPTPPPKRSPKISTK--FSDVFAFSGPAPERINGRLAMVGFVS 114

HSP 2 Score: 43.8986 bits (102), Expect = 4.206e-13
Identity = 34/80 (42.50%), Postives = 39/80 (48.75%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP---GFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KG+D+FA  I  GG       VSL               + RGV V+    G    DAELWNGR AM+GLVALA T   K
Sbjct:  122 KGQDLFA-QISDGG-------VSLFLGTSILLSVASLIPLFRGVSVESKSDGIMTSDAELWNGRLAMLGLVALAFTEYVK 193

[Close]

BLAST of DW043284 vs. P. persica 1.0 peptide
Match: ppa011907m ()

HSP 1 Score: 46.595 bits (109), Expect = 1.006e-10
Identity = 23/48 (47.92%), Postives = 28/48 (58.33%), Query Frame = -3

Query:  419 PPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 562
            PP  P     +    F     +SGPAPERINGRLAM+GFVS  +  +S
Sbjct:   67 PPPSPSSPPPKVSTKFSDLFAFSGPAPERINGRLAMVGFVSALAVELS 114

HSP 2 Score: 36.5798 bits (83), Expect = 1.006e-10
Identity = 31/79 (39.24%), Postives = 37/79 (46.84%), Query Frame = -2

Query:  186 GEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP---GFSIFDAELWNGRFAMVGLVALAVTRIGK 413
            G+DVFA  I +GG       VSL               + +GV V+    G    DAEL NGR AM+GLVAL  T   K
Sbjct:  116 GQDVFA-QISNGG-------VSLFVATSILLSVASLVPLFKGVSVESKSDGIMTSDAELLNGRLAMLGLVALVFTEYVK 186

[Close]

BLAST of DW043284 vs. P. persica 1.0 peptide
Match: ppa014920m ()

HSP 1 Score: 45.8246 bits (107), Expect = 1.006e-10
Identity = 28/60 (46.67%), Postives = 33/60 (55.00%), Query Frame = -3

Query:  440 EEPGREGRKXRNPHPATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 619
            E+P       +NP P+       P   KV T       L +SGPAPERINGRLAM+GFVS
Sbjct:   53 EQPSTVTNASKNPPPSNT-----PFPSKVSTK--ISDLLAFSGPAPERINGRLAMVGFVS 105

HSP 2 Score: 37.3502 bits (85), Expect = 1.006e-10
Identity = 31/76 (40.79%), Postives = 36/76 (47.37%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP---GFSIFDAELWNGRFAMVGLVALAVT 416
            KG+DVFA  I  GG        SL               + +GV V+    G    DAEL NGR AM+GLVALA T
Sbjct:  113 KGQDVFA-QISDGGF-------SLFVGTSILLSVASLIPLFKGVSVESKSDGIMTSDAELLNGRLAMLGLVALAFT 180

[Close]

BLAST of DW043284 vs. P. persica 1.0 peptide
Match: ppa026587m ()

HSP 1 Score: 43.8986 bits (102), Expect = 6.216e-10
Identity = 23/41 (56.10%), Postives = 26/41 (63.41%), Query Frame = -3

Query:  440 PPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 562
            PP+ P   K      F     +SGPAPERINGRLAM+GFVS
Sbjct:   67 PPLTPLPSKASIK--FSDLFAFSGPAPERINGRLAMVGFVS 105

HSP 2 Score: 36.5798 bits (83), Expect = 6.216e-10
Identity = 31/79 (39.24%), Postives = 37/79 (46.84%), Query Frame = -2

Query:  186 GEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP---GFSIFDAELWNGRFAMVGLVALAVTRIGK 413
            G+DVFA  I +GG       VSL               + +GV V+    G    DAEL NGR AM+GLVAL  T   K
Sbjct:  114 GQDVFA-QISNGG-------VSLFVATSILLSVASLVPLFKGVSVESKSEGIMTSDAELLNGRLAMLGLVALVFTEYVK 184

[Close]

BLAST of DW043284 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 6.509e-13
Identity = 39/78 (50.00%), Postives = 46/78 (58.97%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSI-CSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KGEDVFA  I +GGIP    +  L T   +    I   SGV    K +P +S  DAE+WNGRFAM+GLVALA T   K
Sbjct:  117 KGEDVFA-QIANGGIP----WFVLTTGVLSVASLIPLFSGVTVESKSRPFWSS-DAEMWNGRFAMLGLVALAFTEFVK 188

HSP 2 Score: 47.7506 bits (112), Expect = 6.509e-13
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = -3

Query:  419 EPGREGRKXRNPHPATIGP-PVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 616
            E G++ +      P+T  P P+ P   K +    F     +SGPAPERINGRLAMIGFV+  +  +S
Sbjct:   50 ENGQKEQAVPAATPSTPSPLPIPPPPPKAKASTDFFDVFAFSGPAPERINGRLAMIGFVAAIAVELS 116

[Close]

BLAST of DW043284 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.103e-12
Identity = 40/78 (51.28%), Postives = 48/78 (61.54%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSI-CSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KGEDVFA  I +GGIP    +  L T   +    I  S+GV    K KP +S  DAE+WNGRFAM+GLVALA+T   K
Sbjct:  105 KGEDVFA-QISNGGIP----WFLLTTGVLSVASLIPLSNGVSVESKSKPFWSS-DAEMWNGRFAMLGLVALALTEFAK 176

HSP 2 Score: 41.9726 bits (97), Expect = 1.103e-12
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = -3

Query:  419 KVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 538
            KV+T +FF   L +SGP PERINGRLAM+GFV+  +  +S
Sbjct:   67 KVRT-DFFNL-LAFSGPGPERINGRLAMVGFVAAIAVELS 104

[Close]

BLAST of DW043284 vs. TrEMBL
Match: D6QST4|D6QST4_VITVI (Chloroplast ELIP early light-induced protein OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 6.847e-12
Identity = 36/74 (48.65%), Postives = 41/74 (55.41%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP-GFSIFDAELWNGRFAMVGLVALAVT 416
            KGEDVFA  I +GGIP       L T       S+     G  V+ K  G    DAE+WNGRFAM+GLVALA T
Sbjct:  123 KGEDVFA-QISNGGIPW-----FLGTAVVLSLASLIPLFKGVSVESKSKGLMTSDAEMWNGRFAMLGLVALAFT 190

HSP 2 Score: 46.595 bits (109), Expect = 6.847e-12
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  440 IGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 568
            I PP  P   KV T   F     +SGPAPERINGRLAM+GFV+
Sbjct:   75 IPPPPPPPAPKVSTK--FGDVFAFSGPAPERINGRLAMVGFVA 115

[Close]

BLAST of DW043284 vs. TrEMBL
Match: D7T741|D7T741_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018044001 PE=4 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 6.865e-12
Identity = 36/74 (48.65%), Postives = 41/74 (55.41%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP-GFSIFDAELWNGRFAMVGLVALAVT 416
            KGEDVFA  I +GGIP       L T       S+     G  V+ K  G    DAE+WNGRFAM+GLVALA T
Sbjct:  109 KGEDVFA-QISNGGIPW-----FLGTAVVLSLASLIPLFKGVSVESKSKGLMTSDAEMWNGRFAMLGLVALAFT 176

HSP 2 Score: 46.595 bits (109), Expect = 6.865e-12
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  440 IGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 568
            I PP  P   KV T   F     +SGPAPERINGRLAM+GFV+
Sbjct:   61 IPPPPPPPAPKVSTK--FGDVFAFSGPAPERINGRLAMVGFVA 101

[Close]

BLAST of DW043284 vs. TrEMBL
Match: Q6T6I9|Q6T6I9_BRARP (ELIP OS=Brassica rapa subsp. pekinensis PE=2 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 1.157e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = -3

Query:  419 PHPATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 583
            P  ++  PP  P   K +    F   L +SGPAPERINGRLAM+GFV+  +  +S
Sbjct:   63 PLSSSSSPPPPPPPTKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 117

HSP 2 Score: 44.669 bits (104), Expect = 1.157e-11
Identity = 32/79 (40.51%), Postives = 39/79 (49.37%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQT--FFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KGE+V A  I  GG+       ++ T       F  I +    +G      F   DAELWNGRFAM+GLVALA T   K
Sbjct:  118 KGENVLA-QISDGGVSWFLGTTAILTLASLVPLFKGITAESKSKG------FMTSDAELWNGRFAMLGLVALAFTEFVK 189

[Close]

BLAST of DW043284 vs. TrEMBL
Match: Q8W540|Q8W540_9FABA (Early light-induced protein-like protein (Fragment) OS=Retama raetam PE=2 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 1.201e-11
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = -3

Query:  440 PPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 562
            PP   +  K+ T   F   L +SGPAPERINGRLAMIGFV+
Sbjct:   19 PPASTRSPKISTK--FTDVLAFSGPAPERINGRLAMIGFVA 57

HSP 2 Score: 46.595 bits (109), Expect = 1.201e-11
Identity = 37/81 (45.68%), Postives = 45/81 (55.56%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSS-GVGRGVKVKP---GFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KG+DVFA  I +GGI        L     +   S+ S   + RGV V+    GF   DAE+WNGRFAM+GLVALA T   K
Sbjct:   65 KGQDVFA-QISNGGI--------LWFLGTSVVLSLASLIPLFRGVSVESKSGGFMSSDAEIWNGRFAMLGLVALAFTEYVK 136

[Close]

BLAST of DW043284 vs. TrEMBL
Match: D7MGX6|D7MGX6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_330043 PE=4 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.907e-11
Identity = 34/75 (45.33%), Postives = 39/75 (52.00%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQT--FFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVT 416
            KGE+VFA  I +GG+       +L T       F  I      R      GF   DAELWNGRFAM+GLVALA T
Sbjct:  118 KGENVFA-QISNGGVGWFLGTTALLTLASMVPLFKGI------RAESKSKGFMTSDAELWNGRFAMIGLVALAFT 185

HSP 2 Score: 45.4394 bits (106), Expect = 1.907e-11
Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = -3

Query:  419 PATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 577
            P  + P   P   K +    F   L +SGPAPERINGRLAM+GFV+  +  +S
Sbjct:   65 PPQMPPSPPPPVSKPKVSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAVELS 117

[Close]

BLAST of DW043284 vs. TrEMBL
Match: D7L2F8|D7L2F8_ARALY (Early light-inducable protein OS=Arabidopsis lyrata subsp. lyrata GN=ELIP1 PE=4 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 2.545e-11
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = -3

Query:  419 KXRNPHPATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 595
            K  +  P +  PP  P   KV T   F   L +SGPAPERINGRLAM+GFV+  +  +S
Sbjct:   52 KNEDSAPTSAAPP--PTKPKVSTK--FSDLLAFSGPAPERINGRLAMVGFVAALAVELS 106

HSP 2 Score: 45.4394 bits (106), Expect = 2.545e-11
Identity = 32/79 (40.51%), Postives = 39/79 (49.37%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQT--FFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KGE+VFA  I  GG+       ++ T       F  I +     G+         DAELWNGRFAM+GLVALA T   K
Sbjct:  107 KGENVFA-QISDGGVSWFLGTTAILTLASLVPLFKGITAESKSDGIMTS------DAELWNGRFAMLGLVALAFTEFVK 178

[Close]

BLAST of DW043284 vs. TrEMBL
Match: B2CZY6|B2CZY6_CAMSI (Putative cold-inducible protein OS=Camellia sinensis GN=ELIP1 PE=2 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 4.280e-11
Identity = 30/68 (44.12%), Postives = 37/68 (54.41%), Query Frame = -3

Query:  419 EGRKXRNPHPATIGPPVG------PKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 604
            E  + ++  P T  PP        P   KV T   F   L +SGPAPERINGRLAMIGFV+  +  +S
Sbjct:   48 EDDQNKDVTPITTPPPTSQPISFPPPKPKVSTK--FSDVLAFSGPAPERINGRLAMIGFVAAMAVELS 113

HSP 2 Score: 45.4394 bits (106), Expect = 4.280e-11
Identity = 33/77 (42.86%), Postives = 38/77 (49.35%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KGEDV A  I +GG+P    +    +   T    I     G       G    DAELWNGRFAM+GLVALA T   K
Sbjct:  114 KGEDVLA-QISNGGVP----WFGGTSIVLTLASLIPLFKGGSVESRSEGIMSSDAELWNGRFAMLGLVALAFTEFVK 185

[Close]

BLAST of DW043284 vs. TrEMBL
Match: O23325|O23325_ARATH (Light induced protein like OS=Arabidopsis thaliana GN=dl3385w PE=4 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 5.421e-11
Identity = 34/73 (46.58%), Postives = 39/73 (53.42%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVT 416
            KGE+VFA  I  GG+       +L T            G+    K K GF   DAELWNGRFAM+GLVALA T
Sbjct:  117 KGENVFA-QISDGGVGWFLGTTALLTLASMV---PLFKGIRAEAKSK-GFMTSDAELWNGRFAMLGLVALAFT 184

HSP 2 Score: 45.0542 bits (105), Expect = 5.421e-11
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = -3

Query:  419 PATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 577
            P +  PPV     KV T   F   L +SGPAPERINGRLAM+GFV+  +  +S
Sbjct:   68 PQSPPPPVSKP--KVSTK--FGDLLAFSGPAPERINGRLAMVGFVAAIAMELS 116

[Close]

BLAST of DW043284 vs. Vitis vinifera peptide
Match: GSVIVT01018044001 (assembled CDS)

HSP 1 Score: 48.1358 bits (113), Expect = 3.430e-14
Identity = 36/74 (48.65%), Postives = 41/74 (55.41%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKP-GFSIFDAELWNGRFAMVGLVALAVT 416
            KGEDVFA  I +GGIP       L T       S+     G  V+ K  G    DAE+WNGRFAM+GLVALA T
Sbjct:  109 KGEDVFA-QISNGGIPW-----FLGTAVVLSLASLIPLFKGVSVESKSKGLMTSDAEMWNGRFAMLGLVALAFT 176

HSP 2 Score: 46.595 bits (109), Expect = 3.430e-14
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = -3

Query:  440 IGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVS 568
            I PP  P   KV T   F     +SGPAPERINGRLAM+GFV+
Sbjct:   61 IPPPPPPPAPKVSTK--FGDVFAFSGPAPERINGRLAMVGFVA 101

[Close]

BLAST of DW043284 vs. TAIR peptide
Match: AT4G14690.1 (| Symbols: ELIP2 | Chlorophyll A-B binding family protein | chr4:8418373-8419129 FORWARD LENGTH=193)

HSP 1 Score: 46.595 bits (109), Expect = 3.990e-13
Identity = 34/73 (46.58%), Postives = 39/73 (53.42%), Query Frame = -2

Query:  198 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQTFFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVT 416
            KGE+VFA  I  GG+       +L T            G+    K K GF   DAELWNGRFAM+GLVALA T
Sbjct:  117 KGENVFA-QISDGGVGWFLGTTALLTLASMV---PLFKGIRAEAKSK-GFMTSDAELWNGRFAMLGLVALAFT 184

HSP 2 Score: 45.0542 bits (105), Expect = 3.990e-13
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = -3

Query:  419 PATIGPPVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 577
            P +  PPV     KV T   F   L +SGPAPERINGRLAM+GFV+  +  +S
Sbjct:   68 PQSPPPPVSKP--KVSTK--FGDLLAFSGPAPERINGRLAMVGFVAAIAMELS 116

[Close]

BLAST of DW043284 vs. TAIR peptide
Match: AT3G22840.1 (| Symbols: ELIP1, ELIP | Chlorophyll A-B binding family protein | chr3:8084628-8085445 REVERSE LENGTH=195)

HSP 1 Score: 46.595 bits (109), Expect = 1.133e-12
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = -3

Query:  419 PVGPKGLKVQTPNFFRACLHYSGPAPERINGRLAMIGFVSCNSHRIS 559
            P  P  +K +    F   L +SGPAPERINGRLAM+GFV+  +  +S
Sbjct:   72 PSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 118

HSP 2 Score: 43.5134 bits (101), Expect = 1.133e-12
Identity = 31/79 (39.24%), Postives = 38/79 (48.10%), Query Frame = -2

Query:  186 KGEDVFAPDIPSGGIPRGF*YVSLCTYPQT--FFDSICSSGVGRGVKVKPGFSIFDAELWNGRFAMVGLVALAVTRIGK 416
            KGE+V A  I  GG+       ++ T       F  I      +G+         DAELWNGRFAM+GLVALA T   K
Sbjct:  119 KGENVLA-QISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTS------DAELWNGRFAMLGLVALAFTEFVK 190

The following BLAST results are available for this feature:

BLAST of DW043284 vs. DB:swissprot:display
BLAST of DW043284 vs. Populus trichocarpa peptide v2.0
BLAST of DW043284 vs. P. persica 1.0 peptide
BLAST of DW043284 vs. TrEMBL
BLAST of DW043284 vs. Vitis vinifera peptide
BLAST of DW043284 vs. TAIR peptide

BLAST of DW043284 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
ELI_PEA	3.268e-10	38.89	Early light-induced protein, chloroplastic OS=Pisu...	[more]

BLAST of DW043284 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
POPTR_0008s15780.1	2.275e-11	55.32		[more]

BLAST of DW043284 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 5


Match Name	E-value	Identity
ppa011739m	8.774e-14	43.28	[more]
ppa011747m	4.206e-13	43.33	[more]
ppa011907m	1.006e-10	47.92	[more]
ppa014920m	1.006e-10	46.67	[more]
ppa026587m	6.216e-10	56.10	[more]

BLAST of DW043284 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B2BJD6\|B2BJD6_RHOCT	6.509e-13	50.00	Early light-induced protein 7 OS=Rhododendron cata...	[more]
B2BJD5\|B2BJD5_RHOCT	1.103e-12	51.28	Early light-induced protein 6 OS=Rhododendron cata...	[more]
D6QST4\|D6QST4_VITVI	6.847e-12	48.65	Chloroplast ELIP early light-induced protein OS=Vi...	[more]
D7T741\|D7T741_VITVI	6.865e-12	48.65	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q6T6I9\|Q6T6I9_BRARP	1.157e-11	45.45	ELIP OS=Brassica rapa subsp. pekinensis PE=2 SV=1	[more]
Q8W540\|Q8W540_9FABA	1.201e-11	58.54	Early light-induced protein-like protein (Fragment...	[more]
D7MGX6\|D7MGX6_ARALY	1.907e-11	45.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7L2F8\|D7L2F8_ARALY	2.545e-11	47.46	Early light-inducable protein OS=Arabidopsis lyrat...	[more]
B2CZY6\|B2CZY6_CAMSI	4.280e-11	44.12	Putative cold-inducible protein OS=Camellia sinens...	[more]
O23325\|O23325_ARATH	5.421e-11	46.58	Light induced protein like OS=Arabidopsis thaliana...	[more]

BLAST of DW043284 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01018044001	3.430e-14	48.65	assembled CDS	[more]

BLAST of DW043284 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G14690.1	3.990e-13	46.58	\| Symbols: ELIP2 \| Chlorophyll A-B binding family ...	[more]
AT3G22840.1	1.133e-12	48.94	\| Symbols: ELIP1, ELIP \| Chlorophyll A-B binding f...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 38..80 score: 2.5
None	No IPR available	PANTHER	PTHR14154:SF1	EARLY LIGHT-INDUCED PROTEIN	coord: 38..80 score: 2.5
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 34..53 score: 7
None	No IPR available	PANTHER	PTHR14154:SF1	EARLY LIGHT-INDUCED PROTEIN	coord: 34..53 score: 7
None	No IPR available	SEG	seg	seg	coord: 47..56 score
None	No IPR available	SEG	seg	seg	coord: 48..59 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DW043284 ID=DW043284; Name=DW043284; organism=Vaccinium corymbosum; type=EST; length=621bp
GCTGCACTGTAACATAATATTACCATCATTTGAGTTTTCCTTGGCACCAA
AAAAGTTAATATTACATCATTTCAACTTTACAAAATTCAACTACTCATGT
TTTTTCCTGGGGTACAAGTATAACACCATCTTGGATAAATTCTGAATCTC
CATTCAAAGGTGGACCTACACAAGGGGCTCCACCTTTTACCAATTCGGGT
GACCGCCAATGCGACCAAACCCACCATAGCAAATCTCCCATTCCAAAGCT
CAGCATCAAAGATTGAAAAACCCGGTTTGACTTTGACTCCACGCCCTACT
CCACTGGAACATATGGAATCAAAGAATGTCTGCGGATATGTACACAGGGA
TACATATCAAAAACCACGGGGAATCCCACCGCTCGGGATATCTGGGGCAA
ACACATCCTCACCCTTGGGCTAATTCTATGGCTATTGCAGCTCACAAAGC
CGATCATGGCCAATCTACCGTTGATTCTCTCTGGTGCTGGCCCACTGTAA
TGCAAACACGCTCGAAAAAAATTGGGTGTCTGAACCTTTAGACCCTTCGG
TCCAACCGGCGGNCCAATGGTTGCTGGGTGGGGGTTTCTANGCTTTCTCC
CTTCCCGCCCCGGTTCCTCGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated