DW043305

EST Overview
NameDW043305
Unique NameDW043305
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length526
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043305 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s08360.1 ()

HSP 1 Score: 76.2554 bits (186), Expect = 1.778e-15
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH---GRDTKLTGRTIP 327
            LRS TSFI+L+ TRS K  D  S  VCFAQ++PSCRL+AK+  Q  QL Q   L  E R++  WEKLH   G D   +   +P
Sbjct:    5 LRSSTSFISLRHTRSLKTPDGFSGTVCFAQIKPSCRLQAKNSKQEAQLSQDDILVTEGRKSKNWEKLHAISGPDHSSSNSRVP 87          

HSP 2 Score: 23.0978 bits (48), Expect = 1.778e-15
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  309 HGKNDSRNVPVFVMLP 356
            H  ++SR VPVFVMLP
Sbjct:   79 HSSSNSR-VPVFVMLP 93          
BLAST of DW043305 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s03330.1 ()

HSP 1 Score: 70.0922 bits (170), Expect = 9.180e-13
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291
            L+S TSFI+LKDTRS K  D+ S  +CFA ++PSCRL+AK+ MQ  QL   + L  E R++ K  +LH
Sbjct:    5 LQSSTSFISLKDTRSPKTPDDFSGTICFAHIKPSCRLQAKNSMQEAQLSHDEILMTEGRKSKKGGELH 72          
BLAST of DW043305 vs. P. persica 1.0 peptide
Match: ppa003812m ()

HSP 1 Score: 75.0998 bits (183), Expect = 2.031e-14
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTL 249
            LRS TSFINL D +S KA DE S  +C+AQ++P+CRL+AKS MQ TQLLQ+KTL
Sbjct:    5 LRSSTSFINLNDHKSLKASDESSGTICYAQIKPTCRLRAKSSMQETQLLQEKTL 58          
BLAST of DW043305 vs. TrEMBL
Match: B9RUR8|B9RUR8_RICCO (Beta-amylase, putative OS=Ricinus communis GN=RCOM_0856140 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.585e-13
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291
            L S TSFIN+KDT+S K  D+ S  +CFAQ++PSCRL AK+ MQ  QL Q     +E RR+D  EKLH
Sbjct:    5 LHSSTSFINIKDTKSVKTPDDFSGTICFAQIKPSCRLGAKNSMQEAQLSQDNIFTMEGRRSDNREKLH 72          
BLAST of DW043305 vs. TrEMBL
Match: A9PGR1|A9PGR1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580143 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.885e-13
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH---GRDTKLTGRTIP 327
            LRS TSFI+L+ TRS K  D  S  VCFAQ++PSCRL+AK+  Q  QL Q   L  E R++  WEKLH   G D   +   +P
Sbjct:    5 LRSSTSFISLRHTRSLKTPDGFSGTVCFAQIKPSCRLQAKNSKQEAQLSQDDILVTEGRKSKNWEKLHAISGPDHSSSNSRVP 87          

HSP 2 Score: 23.0978 bits (48), Expect = 1.885e-13
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  309 HGKNDSRNVPVFVMLP 356
            H  ++SR VPVFVMLP
Sbjct:   79 HSSSNSR-VPVFVMLP 93          
BLAST of DW043305 vs. TrEMBL
Match: D0VBH4|D0VBH4_EUPES (Beta-amylase 1 OS=Euphorbia esula GN=BAM1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.622e-12
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKL 288
            LRS TSFINLKD++S KA D +SS + FAQM PSC L+ K+  QG QL       LE  +++KWEK+
Sbjct:    5 LRSSTSFINLKDSKSLKAPDGISSTISFAQMMPSCSLRVKNSTQGAQLSSGNIFTLEGNKSNKWEKV 71          

HSP 2 Score: 20.4014 bits (41), Expect = 2.622e-12
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3
Query:  333 VPVFVMLP 356
            VPVFVMLP
Sbjct:   85 VPVFVMLP 92          
BLAST of DW043305 vs. TrEMBL
Match: D0VBH5|D0VBH5_EUPES (Beta-amylase 2 OS=Euphorbia esula GN=BAM2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.771e-11
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291
            LRS TSFI LKD++S KA D +SS + FAQM PSC L+ K+  QG QL       LE  +++KWEK++
Sbjct:    5 LRSSTSFIILKDSKSLKAPDGISSTISFAQMMPSCSLRVKNSTQGAQLSSGNIFTLEGSKSNKWEKVN 72          

HSP 2 Score: 20.4014 bits (41), Expect = 2.771e-11
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3
Query:  333 VPVFVMLP 356
            VPVFVMLP
Sbjct:   85 VPVFVMLP 92          
BLAST of DW043305 vs. TrEMBL
Match: B9MTV8|B9MTV8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589941 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.616e-11
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291
            L+S TSFI+LKDTRS K  D+ S  +CFA ++PSCRL+AK+ MQ  QL   + L  E R++ K  +LH
Sbjct:    5 LQSSTSFISLKDTRSPKTPDDFSGTICFAHIKPSCRLQAKNSMQEAQLSHDEILMTEGRKSKKGGELH 72          
BLAST of DW043305 vs. TrEMBL
Match: Q94EU9|Q94EU9_SOLTU (Beta-amylase PCT-BMYI OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.678e-10
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291
            L+S  SFIN K+T+  KA DE   MV FAQ +PSCRL AKS MQ  QL  ++   +E ++ +K EKLH
Sbjct:    5 LQSSASFINFKETKGVKAPDEFLGMVSFAQAKPSCRLVAKSSMQEAQLSHERI--MEVKKIEKREKLH 70          

HSP 2 Score: 24.2534 bits (51), Expect = 3.678e-10
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  306 AHGKNDSRNVPVFVMLP 356
            A+  N S  VPVFVMLP
Sbjct:   74 ANHSNRSTRVPVFVMLP 90          
BLAST of DW043305 vs. TAIR peptide
Match: AT4G17090.1 (| Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548)

HSP 1 Score: 43.1282 bits (100), Expect = 9.968e-7
Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 1
Query:   88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRP-SCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291
            L S +S I  KD +S +  +  S+ + FA+M+P + + +AK+ ++  +   +KT   E    +KWEKLH
Sbjct:    5 LNSSSSLIKRKDAKSSRNQESSSNNMTFAKMKPPTYQFQAKNSVKEMKFTHEKTFTPEGETLEKWEKLH 73          

HSP 2 Score: 26.1794 bits (56), Expect = 9.968e-7
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  309 HGKNDSRNVPVFVMLP 356
            H KND+ +VPVFVMLP
Sbjct:   79 HSKNDA-SVPVFVMLP 93          
The following BLAST results are available for this feature:
BLAST of DW043305 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0003s08360.11.778e-1549.40[more]
POPTR_0003s03330.19.180e-1351.47[more]
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BLAST of DW043305 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa003812m2.031e-1466.67[more]
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BLAST of DW043305 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 6
Match NameE-valueIdentityDescription
B9RUR8|B9RUR8_RICCO1.585e-1355.88Beta-amylase, putative OS=Ricinus communis GN=RCOM... [more]
A9PGR1|A9PGR1_POPTR1.885e-1349.40Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D0VBH4|D0VBH4_EUPES2.622e-1253.73Beta-amylase 1 OS=Euphorbia esula GN=BAM1 PE=2 SV=... [more]
D0VBH5|D0VBH5_EUPES2.771e-1151.47Beta-amylase 2 OS=Euphorbia esula GN=BAM2 PE=2 SV=... [more]
B9MTV8|B9MTV8_POPTR9.616e-1151.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q94EU9|Q94EU9_SOLTU3.678e-1051.47Beta-amylase PCT-BMYI OS=Solanum tuberosum PE=2 SV... [more]
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BLAST of DW043305 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G17090.19.968e-733.33| Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-a... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 37..50
score
NoneNo IPR availableSEGsegsegcoord: 25..35
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043305 ID=DW043305; Name=DW043305; organism=Vaccinium corymbosum; type=EST; length=526bp
TCGAGACGTGCCGCCCGGGACAGGTACGACGGGGACCCACACTTCTCTTA
TCTCTTCAAAACAAAGATCAAAATATGGCTTTGACAACTGCGTTCTCCAA
CTTCTTTTATCAATTTAAAAGATACAAGAAGTTTCAAAGCAGTTGATGAA
GTCTCCAGCATGGTTTGTTTTGCACAAATGAGGCCATCATGCAGGCTTAA
AGCCAAGAGCTTGATGCAAGGAACTCAACTCTTGCAACAAAAAACCTTGA
ATTTGGAAGACAGGAGGAACGATAAGTGGGAAAAGCTTCACGGACGAGAC
ACGAAGCTCACGGGAAGAACGATTCCAGGAACGTGCCTGTGTTTGTGATG
CTGCCCCACTATAAACAACGGGTATTCTTAGAGAGAGGGGGACCAAAAAG
AAAAACAAAGCCCCGAACAAAGCCGCAATGTAAATTTGTCCCAGTTTTTT
GGAATCGGGCCATTTGAAAAAAAATGCCGGGGGAATTTTAAANGAGGATT
ATTGGTTTGAAACCTTGGGGTGGGGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated