DW043305
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043305 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s08360.1 () HSP 1 Score: 76.2554 bits (186), Expect = 1.778e-15 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH---GRDTKLTGRTIP 327 LRS TSFI+L+ TRS K D S VCFAQ++PSCRL+AK+ Q QL Q L E R++ WEKLH G D + +P Sbjct: 5 LRSSTSFISLRHTRSLKTPDGFSGTVCFAQIKPSCRLQAKNSKQEAQLSQDDILVTEGRKSKNWEKLHAISGPDHSSSNSRVP 87 HSP 2 Score: 23.0978 bits (48), Expect = 1.778e-15 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 309 HGKNDSRNVPVFVMLP 356 H ++SR VPVFVMLP Sbjct: 79 HSSSNSR-VPVFVMLP 93
BLAST of DW043305 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s03330.1 () HSP 1 Score: 70.0922 bits (170), Expect = 9.180e-13 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291 L+S TSFI+LKDTRS K D+ S +CFA ++PSCRL+AK+ MQ QL + L E R++ K +LH Sbjct: 5 LQSSTSFISLKDTRSPKTPDDFSGTICFAHIKPSCRLQAKNSMQEAQLSHDEILMTEGRKSKKGGELH 72
BLAST of DW043305 vs. P. persica 1.0 peptide
Match: ppa003812m () HSP 1 Score: 75.0998 bits (183), Expect = 2.031e-14 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTL 249 LRS TSFINL D +S KA DE S +C+AQ++P+CRL+AKS MQ TQLLQ+KTL Sbjct: 5 LRSSTSFINLNDHKSLKASDESSGTICYAQIKPTCRLRAKSSMQETQLLQEKTL 58
BLAST of DW043305 vs. TrEMBL
Match: B9RUR8|B9RUR8_RICCO (Beta-amylase, putative OS=Ricinus communis GN=RCOM_0856140 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.585e-13 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291 L S TSFIN+KDT+S K D+ S +CFAQ++PSCRL AK+ MQ QL Q +E RR+D EKLH Sbjct: 5 LHSSTSFINIKDTKSVKTPDDFSGTICFAQIKPSCRLGAKNSMQEAQLSQDNIFTMEGRRSDNREKLH 72
BLAST of DW043305 vs. TrEMBL
Match: A9PGR1|A9PGR1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580143 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.885e-13 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH---GRDTKLTGRTIP 327 LRS TSFI+L+ TRS K D S VCFAQ++PSCRL+AK+ Q QL Q L E R++ WEKLH G D + +P Sbjct: 5 LRSSTSFISLRHTRSLKTPDGFSGTVCFAQIKPSCRLQAKNSKQEAQLSQDDILVTEGRKSKNWEKLHAISGPDHSSSNSRVP 87 HSP 2 Score: 23.0978 bits (48), Expect = 1.885e-13 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 309 HGKNDSRNVPVFVMLP 356 H ++SR VPVFVMLP Sbjct: 79 HSSSNSR-VPVFVMLP 93
BLAST of DW043305 vs. TrEMBL
Match: D0VBH4|D0VBH4_EUPES (Beta-amylase 1 OS=Euphorbia esula GN=BAM1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.622e-12 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKL 288 LRS TSFINLKD++S KA D +SS + FAQM PSC L+ K+ QG QL LE +++KWEK+ Sbjct: 5 LRSSTSFINLKDSKSLKAPDGISSTISFAQMMPSCSLRVKNSTQGAQLSSGNIFTLEGNKSNKWEKV 71 HSP 2 Score: 20.4014 bits (41), Expect = 2.622e-12 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 333 VPVFVMLP 356 VPVFVMLP Sbjct: 85 VPVFVMLP 92
BLAST of DW043305 vs. TrEMBL
Match: D0VBH5|D0VBH5_EUPES (Beta-amylase 2 OS=Euphorbia esula GN=BAM2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.771e-11 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291 LRS TSFI LKD++S KA D +SS + FAQM PSC L+ K+ QG QL LE +++KWEK++ Sbjct: 5 LRSSTSFIILKDSKSLKAPDGISSTISFAQMMPSCSLRVKNSTQGAQLSSGNIFTLEGSKSNKWEKVN 72 HSP 2 Score: 20.4014 bits (41), Expect = 2.771e-11 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 3 Query: 333 VPVFVMLP 356 VPVFVMLP Sbjct: 85 VPVFVMLP 92
BLAST of DW043305 vs. TrEMBL
Match: B9MTV8|B9MTV8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589941 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.616e-11 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291 L+S TSFI+LKDTRS K D+ S +CFA ++PSCRL+AK+ MQ QL + L E R++ K +LH Sbjct: 5 LQSSTSFISLKDTRSPKTPDDFSGTICFAHIKPSCRLQAKNSMQEAQLSHDEILMTEGRKSKKGGELH 72
BLAST of DW043305 vs. TrEMBL
Match: Q94EU9|Q94EU9_SOLTU (Beta-amylase PCT-BMYI OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 3.678e-10 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRPSCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291 L+S SFIN K+T+ KA DE MV FAQ +PSCRL AKS MQ QL ++ +E ++ +K EKLH Sbjct: 5 LQSSASFINFKETKGVKAPDEFLGMVSFAQAKPSCRLVAKSSMQEAQLSHERI--MEVKKIEKREKLH 70 HSP 2 Score: 24.2534 bits (51), Expect = 3.678e-10 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 306 AHGKNDSRNVPVFVMLP 356 A+ N S VPVFVMLP Sbjct: 74 ANHSNRSTRVPVFVMLP 90
BLAST of DW043305 vs. TAIR peptide
Match: AT4G17090.1 (| Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548) HSP 1 Score: 43.1282 bits (100), Expect = 9.968e-7 Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 88 LRSPTSFINLKDTRSFKAVDEVSSMVCFAQMRP-SCRLKAKSLMQGTQLLQQKTLNLEDRRNDKWEKLH 291 L S +S I KD +S + + S+ + FA+M+P + + +AK+ ++ + +KT E +KWEKLH Sbjct: 5 LNSSSSLIKRKDAKSSRNQESSSNNMTFAKMKPPTYQFQAKNSVKEMKFTHEKTFTPEGETLEKWEKLH 73 HSP 2 Score: 26.1794 bits (56), Expect = 9.968e-7 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 309 HGKNDSRNVPVFVMLP 356 H KND+ +VPVFVMLP Sbjct: 79 HSKNDA-SVPVFVMLP 93 The following BLAST results are available for this feature:
BLAST of DW043305 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of DW043305 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043305 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 6
BLAST of DW043305 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043305 ID=DW043305; Name=DW043305; organism=Vaccinium corymbosum; type=EST; length=526bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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