DW043473
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043473 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s26150.1 () HSP 1 Score: 125.561 bits (314), Expect = 1.876e-32 Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGV 259 PWRH QKIYLQVI+PVGRKY + SAPRLKL+ +PELKALFSIDD +LP+WLDGMCMAEYLP LEE+LQ Q+++ V Sbjct: 185 PWRHPQKIYLQVIYPVGRKYAPSPSAPRLKLMCTPELKALFSIDDVKLPSWLDGMCMAEYLPHLEELLQRQVLEAV 260 HSP 2 Score: 31.187 bits (69), Expect = 1.876e-32 Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 310 LDRPVEADPVFCKKAT 357 L RP+EADPVFC+KA+ Sbjct: 277 LGRPLEADPVFCRKAS 292
BLAST of DW043473 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s02330.1 () HSP 1 Score: 131.339 bits (329), Expect = 3.715e-31 Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFF 403 PW H QKIYLQVI+PVGRKY A+SAPRLKL+ +PELKALFSID+ +LPAWLDGMCMAEYLP LEE+LQ Q+++ V +++ + S + F ++ FL TFLVHFF Sbjct: 185 PWSHPQKIYLQVIYPVGRKYAPATSAPRLKLMCTPELKALFSIDEVKLPAWLDGMCMAEYLPHLEELLQRQVLEAVTLIDVRRQ-FIEALSPVIGRPLEADPVFCRKASFLVCSGPFTFLVHFF 307
BLAST of DW043473 vs. P. persica 1.0 peptide
Match: ppa006820m () HSP 1 Score: 123.635 bits (309), Expect = 5.501e-29 Identity = 71/154 (46.10%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFFPFHSSSPKPYSASEFLKSFSAIFNFFQGAP 493 PW+H+QKIYLQVI+PV +KY+S SAPRLKLVS+ ELK++FSIDD +LP WL+GMCMAEYLP LEE L+ Q+++ V+ ++ + F + F ++ FL TFLVH S+ P E + S FN QGAP Sbjct: 200 PWKHKQKIYLQVIYPVEKKYVSTPSAPRLKLVSTTELKSIFSIDDVKLPTWLNGMCMAEYLPHLEESLENQVLEAVSLIDVRRRFIEALALQFGR-PLEADPVFCRKATFLAASGVFTFLVHVL---ISTQFPKQQPELMLQSSQHFN-SQGAP 348
BLAST of DW043473 vs. TrEMBL
Match: B9H4Y3|B9H4Y3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818811 PE=4 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.063e-30 Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGV 259 PWRH QKIYLQVI+PVGRKY + SAPRLKL+ +PELKALFSIDD +LP+WLDGMCMAEYLP LEE+LQ Q+++ V Sbjct: 185 PWRHPQKIYLQVIYPVGRKYAPSPSAPRLKLMCTPELKALFSIDDVKLPSWLDGMCMAEYLPHLEELLQRQVLEAV 260 HSP 2 Score: 31.187 bits (69), Expect = 2.063e-30 Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 310 LDRPVEADPVFCKKAT 357 L RP+EADPVFC+KA+ Sbjct: 277 LGRPLEADPVFCRKAS 292
BLAST of DW043473 vs. TrEMBL
Match: B9GQU6|B9GQU6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550881 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.058e-29 Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFF 403 PW H QKIYLQVI+PVGRKY A+SAPRLKL+ +PELKALFSID+ +LPAWLDGMCMAEYLP LEE+LQ Q+++ V +++ + S + F ++ FL TFLVHFF Sbjct: 185 PWSHPQKIYLQVIYPVGRKYAPATSAPRLKLMCTPELKALFSIDEVKLPAWLDGMCMAEYLPHLEELLQRQVLEAVTLIDVRRQ-FIEALSPVIGRPLEADPVFCRKASFLVCSGPFTFLVHFF 307
BLAST of DW043473 vs. TrEMBL
Match: B9R898|B9R898_RICCO (Protein BRE, putative OS=Ricinus communis GN=RCOM_1598050 PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.041e-29 Identity = 67/124 (54.03%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFF 403 PWRH QKIYLQVI+PVGRKY+SA SAPRLKL+S+ ELKALFSIDD +LP WLDGMCMAEYLP LEE+LQ Q+ + V+ ++ + + + + F ++ FL TFLVH + Sbjct: 185 PWRHPQKIYLQVIYPVGRKYVSAPSAPRLKLMSTTELKALFSIDDVKLPPWLDGMCMAEYLPNLEELLQRQVSEAVSLIDVRR-CFIEALAPLFGRPLEADPVFCRKATFLAASGPFTFLVHLY 307
BLAST of DW043473 vs. TrEMBL
Match: D7MSR1|D7MSR1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917509 PE=4 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.908e-27 Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFFPFHSSSPK 427 PW+HQQKIYLQV++P+ RKY SA S PRLKLVSS +LKALFS++D +LP W+DGMC+AEYLP LEE L+ Q+ + V+ ++ + T + F + +F ++ FL TF+VHFF F + PK Sbjct: 186 PWKHQQKIYLQVVYPILRKYESAPSTPRLKLVSSSDLKALFSVEDVKLPPWMDGMCLAEYLPHLEETLERQMEEAVSAIDLRRS-FIETLTLFLGRPLEADPTFCRKATFLTASGQFTFMVHFF-FSTQFPK 315
BLAST of DW043473 vs. TrEMBL
Match: C6TIV4|C6TIV4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.799e-27 Identity = 65/122 (53.28%), Postives = 82/122 (67.21%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVH 397 PWR+ Q+IYLQV++PVGRKYMS SAPRLKLVSSPELKA+FSIDD +LP WLDGMC+AEYLP LEE L Q+++ V+ ++ SS + F ++ FL +FLVH Sbjct: 185 PWRYSQRIYLQVVYPVGRKYMSVPSAPRLKLVSSPELKAVFSIDDVKLPPWLDGMCLAEYLPNLEEYLGKQVLEAVSLIEVRRHFIEALSSPLGR-PVEADAVFCRKATFLAASGVFSFLVH 305
BLAST of DW043473 vs. TrEMBL
Match: B8B2I2|B8B2I2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24465 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.097e-25 Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVA 262 PW+ QKI+LQ +FP+ R Y S SAPRLKLVS+P+LK+ FS+DD +LP WLDGMCMAEYLP LEE L+ Q+V+ A Sbjct: 193 PWKLPQKIHLQAVFPISRSYSSVPSAPRLKLVSTPDLKSFFSVDDVKLPPWLDGMCMAEYLPNLEENLKIQVVEASA 269 HSP 2 Score: 25.7942 bits (55), Expect = 3.097e-25 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3 Query: 264 SIDARRKFIAALVPLFG 314 SI +RR+FI AL P FG Sbjct: 270 SIGSRRRFIEALAPTFG 286 HSP 3 Score: 23.8682 bits (50), Expect = 3.097e-25 Identity = 15/37 (40.54%), Postives = 16/37 (43.24%), Query Frame = 1 Query: 316 RPVEADPVFCKKATISGLPLGCYVFGTFFPIPLQFPK 426 RP+EADPV F IPLQFPK Sbjct: 287 RPLEADPVH-------------------FVIPLQFPK 304
BLAST of DW043473 vs. TrEMBL
Match: Q5XF81|Q5XF81_ARATH (At5g42470 OS=Arabidopsis thaliana GN=At5g42470 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.065e-25 Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFFPFHSSSPK 427 PW+HQQKIYLQV++P+ RKY +A SAPRLKLVS +LK+LFS++D +L W+DGMC+AEYLP LEE L+ QI + VA ++ S + + +F ++ FL TF+VHFF F + PK Sbjct: 188 PWKHQQKIYLQVVYPILRKYEAAPSAPRLKLVSYYDLKSLFSVEDVKLSPWMDGMCLAEYLPHLEETLERQIHEAVAAIDLRRSFIEALSLNLGR-PLEADPTFCRKATFLNASGQFTFMVHFF-FSTQFPK 317
BLAST of DW043473 vs. TrEMBL
Match: Q5Z9P5|Q5Z9P5_ORYSJ (Os06g0715600 protein OS=Oryza sativa subsp. japonica GN=P0481E08.16 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.305e-24 Identity = 67/160 (41.88%), Postives = 89/160 (55.62%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHF-FPFHSSSPKPYSASEFLKSFSAIFNFFQGAPHFKFP 508 PW+ QKI+LQ +FP+ R Y S SAPRLKLVS+P+LK+ FS+DD +LP WLDGMCMAEYLP LEE L+ Q+V+ A ++ + +F + F ++ L TFLVHF P +P E + F+A QG P P Sbjct: 193 PWKLPQKIHLQAVFPISRSYSSVPSAPRLKLVSTPDLKSFFSVDDVKLPPWLDGMCMAEYLPNLEENLKIQVVEASASIGSRRRFIEALAPTFGR-PLEADPIFCRKATILSISGIFTFLVHFVIPLQFPKHQPVLTLESSQHFNA-----QGLPIMSAP 346
BLAST of DW043473 vs. TrEMBL
Match: B7FIB7|B7FIB7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.546e-20 Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPI 220 PWR QKIYLQV++PVGRKYMSA SAPRLKLVSS ELKAL+SIDD +LP WL+GMC+A+ I Sbjct: 189 PWRQSQKIYLQVVYPVGRKYMSAPSAPRLKLVSSSELKALYSIDDVKLPPWLNGMCLADIFQI 251
BLAST of DW043473 vs. TrEMBL
Match: B4FTI4|B4FTI4_MAIZE (Protein BRE OS=Zea mays PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.232e-19 Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRK--YMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHF 400 PWR QKI+LQVIFP+ R Y S SAPRLKL+S+P+L++L S++D +LP W +GMC+AEYLP LE+ L +VD A ++ + + + + F +R L TFLVHF Sbjct: 196 PWRLPQKIHLQVIFPISRSSSYSSMPSAPRLKLISTPDLRSLLSVEDVKLPPWSNGMCLAEYLPALEDSLNGLLVDASASIGSRRR-FIEALAPIFGRPLEADPIFCRRATVLSISGMFTFLVHF 319
BLAST of DW043473 vs. Vitis vinifera peptide
Match: GSVIVT01009916001 (assembled CDS) HSP 1 Score: 132.88 bits (333), Expect = 7.773e-32 Identity = 77/154 (50.00%), Postives = 96/154 (62.34%), Query Frame = 2 Query: 35 WRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFF-PFHSSSPKPYSASEFLKSFSAIFNFFQGAP 493 WRHQQKIYLQVIFPVGRKY+SA SAPRLKLVSSPELK LF I+D +LP WLDGMCMAEYLP LEE L+ QI+D V+ ++ + + + + F ++ FL T LVHFF P +P + + F++ QGAP Sbjct: 184 WRHQQKIYLQVIFPVGRKYVSAPSAPRLKLVSSPELKVLFPIEDVKLPPWLDGMCMAEYLPNLEETLERQILDAVSLIDVRRH-FIEALAPVFGRPLEADPVFCRKVTFLAASGVFTCLVHFFLPTQFPKQQPVLMLQSSQHFNS-----QGAP 331
BLAST of DW043473 vs. TAIR peptide
Match: AT5G42470.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:16982365-16984738 FORWARD LENGTH=382) HSP 1 Score: 117.472 bits (293), Expect = 4.896e-27 Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 2 Query: 32 PWRHQQKIYLQVIFPVGRKYMSASSAPRLKLVSSPELKALFSIDDFRLPAWLDGMCMAEYLPILEEMLQTQIVDGVAFY*CQKEVYCGTSSSFWTGQWKLIQSFAKRPQFLGFLWGVTFLVHFFPFHSSSPK 427 PW+HQQKIYLQV++P+ RKY +A SAPRLKLVS +LK+LFS++D +L W+DGMC+AEYLP LEE L+ QI + VA ++ S + + +F ++ FL TF+VHFF F + PK Sbjct: 188 PWKHQQKIYLQVVYPILRKYEAAPSAPRLKLVSYYDLKSLFSVEDVKLSPWMDGMCLAEYLPHLEETLERQIHEAVAAIDLRRSFIEALSLNLGR-PLEADPTFCRKATFLNASGQFTFMVHFF-FSTQFPK 317 The following BLAST results are available for this feature:
BLAST of DW043473 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of DW043473 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043473 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of DW043473 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of DW043473 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043473 ID=DW043473; Name=DW043473; organism=Vaccinium corymbosum; type=EST; length=556bpback to top |