DW043536

EST Overview
NameDW043536
Unique NameDW043536
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length511
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
Homology
BLAST of DW043536 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.610e-12
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 3
Query:  132 MAASSVMQSILVNPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKAGQNKEVETPRHVVPKGRGPALISFDVLRI*AGPATGRESTAKLAM 425
            MA SSVMQSI+V+P TGVAK   +    P + CCY+PRQ R+S  LVRCMAK GQ +E  +P    PK    A + FD+L    GPA  R    +LAM
Sbjct:    1 MATSSVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP----PK----AKVLFDLLAF-KGPAPER-INGRLAM 87          
BLAST of DW043536 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.777e-11
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  132 MAASSVMQSILVNPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKAGQNKEVETP 317
            MA SSVMQSILV+P TGVAK A   GL    P  CY+PRQ R+S  LVRCMAK G+ +EVE+P
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLNRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESP 60          
BLAST of DW043536 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.777e-11
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  132 MAASSVMQSILVNPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKAGQNKEVETP 317
            MA SSVMQSILV+P TGVAK A   GL    P  CY+PRQ R+S  LVRCMAK G+ +EVE+P
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESP 60          
BLAST of DW043536 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.874e-10
Identity = 51/100 (51.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  132 MAASSVMQSILVNPATGVAKPARVVGLKPMTP-CCYMPRQQRSSSRLVRCMAKAGQNKEVETP-RHVVPKGRGPALISFDVLRI*AGPATGRESTAKLAM 425
            MA SSVMQSILV+P TGVAK A   GL    P   Y+PRQ R S  LVRCMAK G+ +EVE+P +  V K R   +  FD+L   +GP   R    +LAM
Sbjct:    1 MATSSVMQSILVSPVTGVAKGA---GLSRTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESPVKATVAKAR---IDFFDLLAF-SGPGPER-INGRLAM 92          
BLAST of DW043536 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.215e-9
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 3
Query:  132 MAASSVMQSILVNPATGVAKPARVVGLKPMT---PCCYMPRQQRSSSRLVRCMAKAGQNKEVET 314
            MA SSVMQSI+V+PATGVA   +  GL   T     CY+PRQ R+S  LVRCMAK GQ +EV T
Sbjct:    1 MATSSVMQSIMVSPATGVA--TKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEVGT 62          
BLAST of DW043536 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.029e-8
Identity = 35/53 (66.04%), Postives = 39/53 (73.58%), Query Frame = 3
Query:  132 MAASSVMQSILVNPATGVAKPARVVGLKPMTPCCYMPRQQRSSSRLVRCMAKA 290
            MA SSVMQSILV+P TGVAK A +    P T  CY+PRQ R+S  LVRCMAKA
Sbjct:    1 MATSSVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAKA 51          
The following BLAST results are available for this feature:
BLAST of DW043536 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 6
Match NameE-valueIdentityDescription
B2BJD4|B2BJD4_RHOCT7.610e-1250.00Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD1|B2BJD1_RHOCT3.777e-1163.49Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD0|B2BJD0_RHOCT3.777e-1163.49Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT1.874e-1051.00Early light-induced protein 3 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT1.215e-959.38Early light-induced protein 6 OS=Rhododendron cata... [more]
B2BJD3|B2BJD3_RHOCT1.029e-866.04Early light-induced protein 4 OS=Rhododendron cata... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043536 ID=DW043536; Name=DW043536; organism=Vaccinium corymbosum; type=EST; length=511bp
AAGCGTGGTCGCGGCCGAGGTACGCGGGACAACTACAAACTTAATAACTA
ACAGCCCTGAAGTGTAAAGTATCTACATAGCCAATACACTACGAACCCTG
TAACTCAAATCCCTAAGCTTAATACTCTACAATGGCCGCCTCATCAGTAA
TGCAGTCCATTCTAGTGAACCCGGCGACAGGTGTCGCCAAGCCGGCGCGC
GTGGTGGGATTGAAACCGATGACTCCTTGCTGCTATATGCCCCGTCAGCA
GAGGAGCTCTAGCCGGCTAGTGCGGTGCATGGCCAAGGCTGGTCAGAATA
AGGAAGTAGAAACTCCCCGTCATGTTGTCCCAAAAGGACGAGGTCCAGCA
CTGATTTCCTTCGACGTGTTACGCATTTAAGCGGGCCCAGCCACCGGAAG
AGAATCAACGGCCAAACTCGCCATGACCCGGCTTCGTGGCTTGCAATACC
CGTGGGAACTATACAATTGGTCCAGATGTGGTTCACTCNATTTTCCCAAC
CCGTTGCGCGC
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