CF811682 | GDV

EST Overview


Name	CF811682
Unique Name	CF811682
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	466

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF811682 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s13240.1 ()

HSP 1 Score: 104.375 bits (259), Expect = 2.400e-23
Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 3

Query:    6 CINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            CI++L +DFETK+SDDL+T  +L  A QEALK +NGS+             S+I+S              LGL    T +EVLQ+LK KAL R+GLTE+ +  LIE+RAVARK++DFK+++
Sbjct:  362 CISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRAVARKSQDFKKSD 482

HSP 2 Score: 21.1718 bits (43), Expect = 2.400e-23
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2

Query:  395 RAIALMDVGNE 427
            R IALMDVG E
Sbjct:  491 RGIALMDVGKE 501

[Close]

BLAST of CF811682 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0018s02040.1 ()

HSP 1 Score: 75.8702 bits (185), Expect = 1.264e-14
Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 3

Query:    9 INKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            INK  D   T +SDDLHTP +L+A L + LK +N  ++              I+S              LGL+   TY+E LQ+L+EKAL R+ LTE+ I   IEER VARK+KD+++++
Sbjct:  421 INKFHDTLVTSMSDDLHTPVLLSA-LSDPLKIINDMLHTRKGKKQI----KRIESIAALEKMVRNALMVLGLMPP-TYNEALQQLREKALRRAKLTEDQILQKIEERTVARKDKDYEKSD 534

[Close]

BLAST of CF811682 vs. P. persica 1.0 peptide
Match: ppa004241m ()

HSP 1 Score: 105.916 bits (263), Expect = 8.337e-24
Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            +CI+KL ++FETK+ DDL+T +IL  A Q+ALK +N S+N             MIQS            + LGLLS+ TYSEVLQ+ K KAL R+GL E+ +   I+ER +ARKNKDF +++
Sbjct:  362 ECISKLHNEFETKMCDDLNTAHILTGAFQDALKLINSSLNLLKKKQQRQQQLLMIQSLVEIKKEVQELLNILGLLSSDTYSEVLQQFKMKALKRAGLVEDDVLDQIKERTLARKNKDFAKSD 483

[Close]

BLAST of CF811682 vs. P. persica 1.0 peptide
Match: ppa003593m ()

HSP 1 Score: 75.8702 bits (185), Expect = 9.240e-15
Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 3

Query:    9 INKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            IN   + F T +SDDLHTP +L AAL + LK +N  ++              I+S            STLGL+  S YSE+LQ+L++KAL R+ LTE+ +   I+ER  ARKNK+++R++
Sbjct:  412 INNFYNVFVTSMSDDLHTPVVL-AALSDPLKTINDLLHTRKGKKQELR----IESLAAFGKILGNVLSTLGLMPES-YSEILQQLRDKALKRAKLTEDQVLQKIDERTAARKNKEYERSD 525

[Close]

BLAST of CF811682 vs. TrEMBL
Match: D7TUC2|D7TUC2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_17.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015813001 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.989e-26
Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            DCI+KL+ DF+TK+SDDL TP+ILNA+LQEAL+F+N  +N            S +QS            S LGLLS   YSEVLQ+LK KAL R+G+ E+ +  LIEERA+ARKNK+F R +
Sbjct:  353 DCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKNKNFSRGD 474

[Close]

BLAST of CF811682 vs. TrEMBL
Match: D7T0D3|D7T0D3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_265.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005202001 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.727e-25
Identity = 61/122 (50.00%), Postives = 79/122 (64.75%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            DCI  L+ DF+TK+SDDL TP+ILNA+LQEAL+F+N  +N            S ++S            S LGLLS   YSEVLQ+LK KAL R+G+ E+ +  LIEERA+ARKNKDF + +
Sbjct:  353 DCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGD 474

[Close]

BLAST of CF811682 vs. TrEMBL
Match: B9T553|B9T553_RICCO (Cysteinyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_0289620 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.395e-24
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 3

Query:    6 CINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            CINKLRD+FETK+SDDL T +IL  A Q+ALKF+N S++            S+IQS            + LGLL   TY+E+LQ+LK+KAL R+G+TE+ +   IEERA ARKNK+F R++
Sbjct:  361 CINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQKPQQLSLIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLRSIEERAQARKNKEFSRSD 481

HSP 2 Score: 21.1718 bits (43), Expect = 1.395e-24
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2

Query:  383 NXLLRAIALMDVGNE 427
            N   + IALMDVG E
Sbjct:  486 NLAAKGIALMDVGKE 500

[Close]

BLAST of CF811682 vs. TrEMBL
Match: B9HWF9|B9HWF9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833615 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.890e-21
Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 3

Query:    6 CINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            CI++L +DFETK+SDDL+T  +L  A QEALK +NGS+             S+I+S              LGL    T +EVLQ+LK KAL R+GLTE+ +  LIE+RAVARK++DFK+++
Sbjct:  362 CISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRAVARKSQDFKKSD 482

HSP 2 Score: 21.1718 bits (43), Expect = 2.890e-21
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2

Query:  395 RAIALMDVGNE 427
            R IALMDVG E
Sbjct:  491 RGIALMDVGKE 501

[Close]

BLAST of CF811682 vs. TrEMBL
Match: Q9FMB9|Q9FMB9_ARATH (Cysteine-tRNA ligase OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.149e-18
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            D I KL+ +FE+K+ DDL+T +IL  A Q+ALKF+N S++            SM+ S              LGLL+  +Y+E+L+ +K K L R+ + EEGIS LIEER  ARKNKDF +++
Sbjct:  346 DIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRM-SMLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSD 466

[Close]

BLAST of CF811682 vs. TrEMBL
Match: B3LFA4|B3LFA4_ARATH (At5g38830 OS=Arabidopsis thaliana GN=At5g38830 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.149e-18
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            D I KL+ +FE+K+ DDL+T +IL  A Q+ALKF+N S++            SM+ S              LGLL+  +Y+E+L+ +K K L R+ + EEGIS LIEER  ARKNKDF +++
Sbjct:  357 DIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRM-SMLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSD 477

[Close]

BLAST of CF811682 vs. TrEMBL
Match: B9RP10|B9RP10_RICCO (Cysteinyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_0923140 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.253e-16
Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            D INK  D F T +SDDLHTP +L AAL + LK +N  ++              IQS            S LGL+  +TYSEVLQ+L+EKAL R+ LTEE +   IEER VARKN+D++R++
Sbjct:  416 DGINKFSDVFVTSMSDDLHTPVLL-AALSDPLKIINDMLHTR----------KRIQSLAALEKIVRDALSVLGLMP-TTYSEVLQQLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSD 525

[Close]

BLAST of CF811682 vs. TrEMBL
Match: D7SV28|D7SV28_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035951001 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.249e-15
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            DCINK  +DF T +SDDLHTP +L AAL + LK +N  ++              ++S            + LGL+ AS YSE L +L+EKAL RS LTE+ I   IEER +ARKNK++++++
Sbjct:  322 DCINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTINDLLHTRKGKKQELR----LESLAALEKVIRDVLTILGLMPAS-YSEALLQLREKALKRSKLTEDHILQKIEERTMARKNKEYEKSD 437

[Close]

BLAST of CF811682 vs. TrEMBL
Match: D7MJU3|D7MJU3_ARALY (tRNA synthetase class I (C) family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494092 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.699e-14
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            D I KL+ +FE+K+ DDL+T +IL  A Q+ALKF+N + +            SM+ S              LGLL+  +Y+EVL+ +K K L R+ + EE I   IE+R  AR NKDF +++
Sbjct:  357 DIIKKLKSEFESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQKKQRM-SMLVSLVEIEKAAREVLDVLGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDRITARNNKDFAKSD 477

[Close]

BLAST of CF811682 vs. TrEMBL
Match: Q0IZQ2|Q0IZQ2_ORYSJ (Os09g0556500 protein OS=Oryza sativa subsp. japonica GN=Os09g0556500 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.367e-13
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            +CI KL D+FET +SDDLHT   L AA+ E LK MN  ++              ++S            S LGLL +S Y E LQ+L+EKAL R+ +TEE +   IEER  ARK K +++++
Sbjct:  417 NCIQKLHDEFETSMSDDLHTSVAL-AAISEPLKVMNDLLHTRKGKKQE----KRLESLSAMEEKIRMVLSVLGLLPSSYY-EALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSD 532

[Close]

BLAST of CF811682 vs. Vitis vinifera peptide
Match: GSVIVT01015813001 (assembled CDS)

HSP 1 Score: 120.168 bits (300), Expect = 3.683e-28
Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            DCI+KL+ DF+TK+SDDL TP+ILNA+LQEAL+F+N  +N            S +QS            S LGLLS   YSEVLQ+LK KAL R+G+ E+ +  LIEERA+ARKNK+F R +
Sbjct:  353 DCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKNKNFSRGD 474

[Close]

BLAST of CF811682 vs. Vitis vinifera peptide
Match: GSVIVT01005202001 (assembled CDS)

HSP 1 Score: 116.701 bits (291), Expect = 4.072e-27
Identity = 61/122 (50.00%), Postives = 79/122 (64.75%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            DCI  L+ DF+TK+SDDL TP+ILNA+LQEAL+F+N  +N            S ++S            S LGLLS   YSEVLQ+LK KAL R+G+ E+ +  LIEERA+ARKNKDF + +
Sbjct:  353 DCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGD 474

[Close]

BLAST of CF811682 vs. Vitis vinifera peptide
Match: GSVIVT01035951001 (assembled CDS)

HSP 1 Score: 83.5741 bits (205), Expect = 3.820e-17
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            DCINK  +DF T +SDDLHTP +L AAL + LK +N  ++              ++S            + LGL+ AS YSE L +L+EKAL RS LTE+ I   IEER +ARKNK++++++
Sbjct:  322 DCINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTINDLLHTRKGKKQELR----LESLAALEKVIRDVLTILGLMPAS-YSEALLQLREKALKRSKLTEDHILQKIEERTMARKNKEYEKSD 437

[Close]

BLAST of CF811682 vs. TAIR peptide
Match: AT5G38830.1 (| Symbols: | Cysteinyl-tRNA synthetase, class Ia family protein | chr5:15545764-15548094 REVERSE LENGTH=511)

HSP 1 Score: 93.2041 bits (230), Expect = 6.779e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 3

Query:    3 DCINKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            D I KL+ +FE+K+ DDL+T +IL  A Q+ALKF+N S++            SM+ S              LGLL+  +Y+E+L+ +K K L R+ + EEGIS LIEER  ARKNKDF +++
Sbjct:  357 DIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRM-SMLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSD 477

[Close]

BLAST of CF811682 vs. TAIR peptide
Match: AT2G31170.2 (| Symbols: SYCO ARATH | Cysteinyl-tRNA synthetase, class Ia family protein | chr2:13282559-13284256 REVERSE LENGTH=401)

HSP 1 Score: 68.9366 bits (167), Expect = 1.369e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3

Query:    9 INKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            IN  R +F   +SDDL TP  L AA+ E LK +N  ++            S+               + LGL+  S YSEVL++LKEKAL R+GL EE +   ++ER  ARKNK+++R++
Sbjct:  250 INTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARREESL----KALETTIRDVLTILGLMPTS-YSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSD 363

[Close]

BLAST of CF811682 vs. TAIR peptide
Match: AT2G31170.1 (| Symbols: SYCO ARATH | Cysteinyl-tRNA synthetase, class Ia family protein | chr2:13282559-13285616 REVERSE LENGTH=563)

HSP 1 Score: 68.9366 bits (167), Expect = 1.369e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3

Query:    9 INKLRDDFETKLSDDLHTPYILNAALQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            IN  R +F   +SDDL TP  L AA+ E LK +N  ++            S+               + LGL+  S YSEVL++LKEKAL R+GL EE +   ++ER  ARKNK+++R++
Sbjct:  412 INTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARREESL----KALETTIRDVLTILGLMPTS-YSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSD 525

[Close]

BLAST of CF811682 vs. TAIR peptide
Match: AT3G56300.1 (| Symbols: | Cysteinyl-tRNA synthetase, class Ia family protein | chr3:20880169-20882366 FORWARD LENGTH=489)

HSP 1 Score: 60.4622 bits (145), Expect = 4.870e-10
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 3

Query:   84 LQEALKFMNGSMNXXXXXXXXXXXXSMIQSXXXXXXXXXXXXSTLGLLSASTYSEVLQRLKEKALTRSGLTEEGISLLIEERAVARKNKDFKRAE 368
            ++ ALKF+N S++            S++ S              LGLL+  +Y E+L+ +K+KALTR+G+ EE +   IEER +ARK+KDF+R++
Sbjct:  338 VKNALKFINVSISKLKKMQKKQRM-SLVVSLVEVEKAVREVLDVLGLLTTLSYGELLKDMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSD 431

The following BLAST results are available for this feature:

BLAST of CF811682 vs. Populus trichocarpa peptide v2.0
BLAST of CF811682 vs. P. persica 1.0 peptide
BLAST of CF811682 vs. TrEMBL
BLAST of CF811682 vs. Vitis vinifera peptide
BLAST of CF811682 vs. TAIR peptide

BLAST of CF811682 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0010s13240.1	2.400e-23	46.28		[more]
POPTR_0018s02040.1	1.264e-14	40.00		[more]

BLAST of CF811682 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa004241m	8.337e-24	45.90		[more]
ppa003593m	9.240e-15	40.00		[more]

BLAST of CF811682 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7TUC2\|D7TUC2_VITVI	6.989e-26	51.64	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7T0D3\|D7T0D3_VITVI	7.727e-25	50.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9T553\|B9T553_RICCO	1.395e-24	49.59	Cysteinyl-tRNA synthetase, putative OS=Ricinus com...	[more]
B9HWF9\|B9HWF9_POPTR	2.890e-21	46.28	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9FMB9\|Q9FMB9_ARATH	9.149e-18	42.62	Cysteine-tRNA ligase OS=Arabidopsis thaliana PE=4 ...	[more]
B3LFA4\|B3LFA4_ARATH	9.149e-18	42.62	At5g38830 OS=Arabidopsis thaliana GN=At5g38830 PE=...	[more]
B9RP10\|B9RP10_RICCO	2.253e-16	45.90	Cysteinyl-tRNA synthetase, putative OS=Ricinus com...	[more]
D7SV28\|D7SV28_VITVI	7.249e-15	42.62	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7MJU3\|D7MJU3_ARALY	4.699e-14	38.52	tRNA synthetase class I (C) family protein OS=Arab...	[more]
Q0IZQ2\|Q0IZQ2_ORYSJ	1.367e-13	40.98	Os09g0556500 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of CF811682 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01015813001	3.683e-28	51.64	assembled CDS	[more]
GSVIVT01005202001	4.072e-27	50.00	assembled CDS	[more]
GSVIVT01035951001	3.820e-17	42.62	assembled CDS	[more]

BLAST of CF811682 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G38830.1	6.779e-20	42.62	\| Symbols: \| Cysteinyl-tRNA synthetase, class Ia ...	[more]
AT2G31170.2	1.369e-12	38.33	\| Symbols: SYCO ARATH \| Cysteinyl-tRNA synthetase,...	[more]
AT2G31170.1	1.369e-12	38.33	\| Symbols: SYCO ARATH \| Cysteinyl-tRNA synthetase,...	[more]
AT3G56300.1	4.870e-10	36.84	\| Symbols: \| Cysteinyl-tRNA synthetase, class Ia ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding	SUPERFAMILY	47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	coord: 1..121 score: 2
None	No IPR available	SEG	seg	seg	coord: 41..52 score: NAcoord: 58..69 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF811682 ID=CF811682; Name=CF811682; organism=Vaccinium corymbosum; type=EST; length=466bp
AAGACTGCATCAATAAACTACGCGATGATTTTGAGACAAAGTTATCTGAT
GATTTGCACACACCATACATACTGAATGCTGCTCTCCAAGAAGCTTTGAA
ATTCATGAACGGTTCTATGAACCTGCTCAAGAAGAAGCAACCAAAACAAC
AACAATTATCGATGATTCAGTCCCTTGTANAATTAGAGAAAGAAGTCAAG
AAAGTGTTGAGCACCCTTGGATTGCTGTCTGCATCAACTTATTCCGAGGT
TCTTCAGCGGTTGAAAGAGAAAGCATTGACGAGATCTGGGTTAACGGAAG
AAGGCATCTCACTTCTGATTGAAGAAAGAGCAGTGGCAAGGAAGAACAAA
GATTTCAAGAGGGCCGAATGAGATTAGGAGTGAACTANCTCCTAAGGGCC
ATCGCTTTAATGGATGTGGGAAATGAACATGAATTGGCANGCCATGCGTA
CCNCGTGTTCAAGAAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0006418	tRNA aminoacylation for protein translation

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K01883	CARS, cysS; cysteinyl-tRNA synthetase [EC:6.1.1.16]

Vocabulary: **KEGG PATHWAY**
Term	Definition
ko03010	Ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR009080	tRNAsynth_Ia_anticodon-bd
noIPR	unintegrated