CV090289 | GDV

EST Overview


Name	CV090289
Unique Name	CV090289
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	705

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090289 vs. DB:swissprot:display
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.140e-33
Identity = 76/177 (42.94%), Postives = 103/177 (58.19%), Query Frame = 2

Query:  173 GDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            G   T ++ L   L   F  KDLG + YFLGI++     G+ LSQ KY   IL+  G+L  KP+ TP+   +   V   +    P  +R +VG L YLT+TRPDIS+AV++V Q M  P L   + + R++RY+K     GL+   +  L V+AF DSDWAG  S RRSTTG+C FL
Sbjct:   14 GSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of CV090289 vs. DB:swissprot:display
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.262e-26
Identity = 84/242 (34.71%), Postives = 125/242 (51.65%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSV-FSLTSDRGKXXXXXXXXXXXXNGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNL--SQRKYVLDILDETGLLGSKPVETPMDPNVKLCV--------DQGELLSSPDQYRRLVGKLNYLTV-TRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGY 691
            K+LYGLKQ+PR W+ KF   +      + +SD  V F   S+                G D+  I +LK  L   F  KDLG  +  LG+++ + +    L  SQ KY+  +L+   +  +KPV TP+  ++KL          ++G +   P  Y   VG L Y  V TRPDI+ AV +VS+F+  P   H EAV  I+RYL+   G  L +  S  + ++ +TD+D AGD  +R+S+TGY
Sbjct:  958 KSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP--YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGY 1196

[Close]

BLAST of CV090289 vs. DB:swissprot:display
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.283e-22
Identity = 72/241 (29.88%), Postives = 118/241 (48.96%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXXN----GDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQ----YRRLVGKLNYLTV-TRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYR--ASGHLRVEAFTDSDWAGDPSDRRSTTGY 691
            KA+YGLKQ+ R WF  F  A+          D  ++ L  D+G             +      D T ++  K +L  +F   DL ++++F+GI +   +  + LSQ  YV  IL +  +     V TP+   +       ELL+S +      R L+G L Y+ + TRPD++ AV+++S++ S       + + R++RYLK      L ++   +   ++  + DSDWAG   DR+STTGY
Sbjct: 1036 KAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYIL--DKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINY-----ELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1269

[Close]

BLAST of CV090289 vs. DB:swissprot:display
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.564e-20
Identity = 67/234 (28.63%), Postives = 107/234 (45.73%), Query Frame = 2

Query:    8 LYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXXNGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHG-VNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVT-RPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            +YGLKQ+P  W    ++ + + G  R   +H ++  ++  G                     D +K  L   +  KDLGK+  FLG+ + QS +G + LS + Y+     E+ +   K  +TP+  +  L       L     Y+ +VG+L +   T RPDIS+ VSL+S+F+  PR  H E+  R++RYL       L YR+   L +  + D+          ST GY   L
Sbjct:   40 MYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLL 273

[Close]

BLAST of CV090289 vs. DB:swissprot:display
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.286e-18
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 2

Query:  461 YLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYC 694
            YLT+TRPD++FAV+ +SQF SA R    +AV +++ Y+K   G+GLFY A+  L+++AF DSDWA  P  RRS TG+C
Sbjct:    2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s45470.1 ()

HSP 1 Score: 94.7449 bits (234), Expect = 5.760e-20
Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 2

Query:  173 GDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRL 445
            G+D   I   K FL   FH KDLG L+YFLGIEV+ SK+G+ +SQRKY L ++++ GL G+ P+ TPM+  +KL  D+G LL   ++YRRL
Sbjct:   17 GNDPVNIAATKQFLHKHFHIKDLGDLKYFLGIEVSTSKNGIFISQRKYALKVIEDAGLSGAAPINTPMERGLKL-KDKGTLLKDTNRYRRL 106

[Close]

BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s06250.1 ()

HSP 1 Score: 71.2478 bits (173), Expect = 6.820e-13
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 2

Query:  461 YLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            YLT TRPDI  AVS++S+FM      H +A  R++RY+K     G+ Y  S   ++  ++DSDW G   D +ST+GYC  L
Sbjct:    2 YLTATRPDILNAVSILSRFMHFASELHFKAAKRVIRYVKGTCNFGIRYTRSREFKLVGYSDSDWGGSIDDLKSTSGYCFSL 82

[Close]

BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s21470.1 ()

HSP 1 Score: 60.4622 bits (145), Expect = 1.204e-9
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 2

Query:  344 LLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVL 556
            ++  +P ETP+D   +L  D+    ++  QY+RLVGKL YL  TRPDI++ +S+VSQFM  P+  H ++ L
Sbjct:    1 MVDCRPCETPIDLKHRLENDEEGATTNKGQYQRLVGKLIYLAHTRPDIAYVMSVVSQFMHNPKDSHLQSSL 71

[Close]

BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0019s12770.1 ()

HSP 1 Score: 55.4546 bits (132), Expect = 3.873e-8
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 2

Query:  359 PVETPMDPNVKLCVDQ-GELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLK 577
            PV TP++  V+L   + G +   P  ++ LVG L YLT TR DI + V L+S++M  P   H  A  RI+RY+K
Sbjct:    6 PVSTPVENGVELRKSKVGNV--DPTYFKSLVGSLRYLTCTRLDILYGVGLISRYMETPDQSHLNAAKRILRYIK 77

[Close]

BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s07530.1 ()

HSP 1 Score: 52.7582 bits (125), Expect = 2.510e-7
Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 2

Query:  515 FMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGY 691
            FMS+P   H E   R+++Y++     G++Y  +G +++  + DSDWAG   D +ST+GY
Sbjct:    1 FMSSPSNIHMEIAKRVLKYIRGTADLGIWYLKTGGVKLIGYADSDWAGSVDDMKSTSGY 59

[Close]

BLAST of CV090289 vs. TrEMBL
Match: Q0KIN0|Q0KIN0_SOLDE (Integrase core domain containing protein OS=Solanum demissum GN=SDM1_4t00013 PE=4 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.274e-75
Identity = 141/235 (60.00%), Postives = 176/235 (74.89%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWFGKFS  +  FGM R  +DHSVF   S   +              G+DQ GI +LK  L   F TKDLG+L+YFLGIEVAQS+ G+ +SQRKY LDIL+ETG++G +PV+TPMDPNVKL   QGE LS+P++YRRLVGKLNYLTVTRPDISF VS+VSQFM++P   H EAV+RI+RY+K+ PG+GL +   GH  +  +TD+DWAG PSDRRST+GYC+ +
Sbjct: 1019 RSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSRCIYLVVYVDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLGIEVAQSRSGIVISQRKYALDILEETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRLVGKLNYLTVTRPDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIGYTDADWAGSPSDRRSTSGYCVLV 1253

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5C231|A5C231_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026166 PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.284e-74
Identity = 142/235 (60.43%), Postives = 171/235 (72.77%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWFG+FS  V  FGM R  SDHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H +AV+RI+RY+K+ PG+G+ Y   GH +V  +TD DWAG P+DRRST+GYC+F+
Sbjct: 1635 RSLYGLKQSPRAWFGRFSYVVQEFGMLRSTSDHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDVDWAGSPTDRRSTSGYCVFI 1869

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5BH35|A5BH35_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021168 PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.284e-74
Identity = 140/235 (59.57%), Postives = 172/235 (73.19%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWF +FS  V  FGM R  +DHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL + QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H +AV+RI+RY+K+ PG+G+ Y   GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  967 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVLGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 1201

[Close]

BLAST of CV090289 vs. TrEMBL
Match: Q0KIP5|Q0KIP5_SOLDE (Polyprotein, putative OS=Solanum demissum GN=SDM1_42t00023 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.289e-74
Identity = 139/235 (59.15%), Postives = 174/235 (74.04%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWFGKFS  +  FGM R  +DHSVF   S                  G+DQ GI  LK  L   F TKDLG+L+YFLGIEVAQS+ G+ +SQRKY LDIL+ETG++G +P++TPM+PNVKL   QGE LS+P++YRRLVGKLNYLTVTRPDISF VS+VSQFM++P   H EAV+RI+RY+K+ PG+GL +   GH  +  +TD+DWAG PSDRRST+GYC+ +
Sbjct:  780 RSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSLCIYLVVYVDDIVITGNDQDGITNLKQHLFKHFQTKDLGRLKYFLGIEVAQSRSGIVISQRKYALDILEETGMMGCRPIDTPMEPNVKLLPGQGEPLSNPERYRRLVGKLNYLTVTRPDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIGYTDADWAGSPSDRRSTSGYCVLV 1014

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5BSQ9|A5BSQ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031849 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.601e-74
Identity = 140/235 (59.57%), Postives = 172/235 (73.19%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWF +FS  V  FGM R  +DHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H +AV+RI+RY+K+ PG+G+ Y+  GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  545 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYQNRGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 779

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5BXY6|A5BXY6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012155 PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.315e-74
Identity = 140/235 (59.57%), Postives = 171/235 (72.77%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWF +FS  V  FGM R  +DHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H +AV+RI+RY+K+ PG+G+ Y   GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  450 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 684

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5BBP4|A5BBP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034325 PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.315e-74
Identity = 140/235 (59.57%), Postives = 171/235 (72.77%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWF +FS  V  FGM R  +DHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H +AV+RI+RY+K+ PG+G+ Y   GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  834 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 1068

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5B551|A5B551_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001841 PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.315e-74
Identity = 140/235 (59.57%), Postives = 171/235 (72.77%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWF +FS  V  FGM R  +DHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H +AV+RI+RY+K+ PG+G+ Y   GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  858 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 1092

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5B3I0|A5B3I0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041770 PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.315e-74
Identity = 140/235 (59.57%), Postives = 170/235 (72.34%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWF +FS  V  FGM R  +DHSVF   +  G+              G DQ GI +LK  L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P +YRRLVGKLNYLT+TRPDISF VS+VSQF+  P   H +AV+RI+RY+K+ PG+G+ Y   GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  279 RSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSNSGVVLSQRKYALDILEETGMLNCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQLPCDSHWDAVIRILRYIKSTPGQGVLYENKGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 513

[Close]

BLAST of CV090289 vs. TrEMBL
Match: A5B4S8|A5B4S8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026777 PE=4 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.554e-74
Identity = 139/235 (59.15%), Postives = 171/235 (72.77%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            ++LYGLKQSPRAWFG FS  V  FGM    +DHSVF   +  G+              G DQ GI +LK +L   F TKDLGKL+YFLGIE+AQS  GV LSQRKY LDIL+ETG+L  KPV+TPMDPNVKL   QGE L  P++YRRLVGKLNYLT+TRPDISF VS+VSQF+ +P   H + V+RI+RY+K+ PG+G+ Y   GH +V  +TD+DWAG P+DRRST+GYC+F+
Sbjct:  872 RSLYGLKQSPRAWFGHFSSVVQEFGMFCSTADHSVFYHHNSLGQCIYLVVYVDNIVITGSDQDGIQKLKQYLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPERYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDVVIRILRYIKSTPGQGMLYENKGHTQVVGYTDADWAGSPTDRRSTSGYCVFI 1106

[Close]

BLAST of CV090289 vs. Vitis vinifera peptide
Match: GSVIVT01031724001 (assembled CDS)

HSP 1 Score: 112.464 bits (280), Expect = 1.625e-25
Identity = 59/129 (45.74%), Postives = 76/129 (58.91%), Query Frame = 2

Query:  314 YVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIF 700
            Y+ D+L   GL  SK V +PM     L +  G     P  YR LVG L Y T+TRPDI++ ++   QFM AP   H +AV R++RYLK     GL ++ S  L + A+TD+D A  P DRRST GYCIF
Sbjct:  950 YICDLLQRAGLSESKLVTSPMAVGHVLSIADGTRFEDPTLYRSLVGALQYCTITRPDIAYTINKFFQFMHAPTSTHLQAVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADGASCPDDRRSTNGYCIF 1078

[Close]

BLAST of CV090289 vs. Vitis vinifera peptide
Match: GSVIVT01000641001 (assembled CDS)

HSP 1 Score: 85.1149 bits (209), Expect = 2.779e-17
Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 2

Query:  386 VKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            +KL  D G        Y+++VG L YLT TRPDI  +VSL+S++M  P   H  A  +I RYL+     GLFY+      +  FTDSD+AGD  +RRST+GY   L
Sbjct:  220 LKLNKDHGGKKVDSIIYKQIVGSLMYLTATRPDIMHSVSLISRYMENPTELHFLAAKKICRYLQGTKDFGLFYKKGKRSDLIGFTDSDYAGDQDNRRSTSGYVFML 325

[Close]

BLAST of CV090289 vs. Vitis vinifera peptide
Match: GSVIVT01012382001 (assembled CDS)

HSP 1 Score: 82.4185 bits (202), Expect = 1.801e-16
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 2

Query:  497 VSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            VSLVSQ+M AP + H   V RI+RYLK   GRG+  R +GH  +  F+DSDWAG+  DRRSTTGYC+F+
Sbjct:  751 VSLVSQYMHAPTVVHLCMVKRILRYLKKTIGRGIVMRRNGHTDIIGFSDSDWAGNTIDRRSTTGYCMFV 819

[Close]

BLAST of CV090289 vs. Vitis vinifera peptide
Match: GSVIVT01011334001 (assembled CDS)

HSP 1 Score: 72.7886 bits (177), Expect = 1.427e-13
Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 2

Query:   17 LKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXX-NGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLL 349
            LK      F  F+  V  FG   CHSDH++F   + +G+               D +  I +LK    H+F  KDLG L+YF G+E+ +S  G+ +SQ KYVLD+L E  +L
Sbjct:    3 LKNLLELGFDHFTKVVKGFGYSWCHSDHTLFVKHTVKGRTAIIIVYVGDIILTKDHEEEIGKLKSIFAHEFEIKDLGNLKYFFGMEITRSNMGIVVSQCKYVLDLLTEIEML 114

[Close]

BLAST of CV090289 vs. Vitis vinifera peptide
Match: GSVIVT01013341001 (assembled CDS)

HSP 1 Score: 65.855 bits (159), Expect = 1.744e-11
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 2

Query:  518 MSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            M +P   H   V +I++YLK  P +GL +      ++EAFTD+DWAG   DRRST+GYC F+
Sbjct:    1 MHSPYEAHMNVVYKILQYLKGTPRKGLHFGKHDQFKIEAFTDADWAGSIEDRRSTSGYCTFV 62

[Close]

BLAST of CV090289 vs. Vitis vinifera peptide
Match: GSVIVT01013655001 (assembled CDS)

HSP 1 Score: 56.9954 bits (136), Expect = 8.103e-9
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 2

Query:  506 VSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            +SQFM  P   H  AV R++RYL      G+  R +  L + AF+DSDWAG+  D  ST+ Y I+L
Sbjct: 4258 LSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLRRTSPLALHAFSDSDWAGNKDDFTSTSAYIIYL 4323

[Close]

BLAST of CV090289 vs. TAIR peptide
Match: AT4G23160.1 (| Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262)

HSP 1 Score: 209.149 bits (531), Expect = 1.844e-54
Identity = 105/234 (44.87%), Postives = 146/234 (62.39%), Query Frame = 2

Query:    2 KALYGLKQSPRAWFGKFSDAVLRFGMKRCHSDHSVFSLTSDRGKXXXXXXXXXXXXNGDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            K++YGLKQ+ R WF KFS  ++ FG  + HSDH+ F   +                  ++   +DELK  L+  F  +DLG L+YFLG+E+A+S  G+N+ QRKY LD+LDETGLLG KP   PMDP+V      G        YRRL+G+L YL +TR DISFAV+ +SQF  APRL H +AV++I+ Y+K   G+GLFY +   ++++ F+D+ +      RRST GYC+FL
Sbjct:  234 KSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

[Close]

BLAST of CV090289 vs. TAIR peptide
Match: ATMG00810.1 (| Symbols: ORF240B | DNA/RNA polymerases superfamily protein | chrM:227709-228431 REVERSE LENGTH=240)

HSP 1 Score: 140.969 bits (354), Expect = 6.166e-34
Identity = 76/177 (42.94%), Postives = 103/177 (58.19%), Query Frame = 2

Query:  173 GDDQTGIDELKLFLQHQFHTKDLGKLRYFLGIEVAQSKHGVNLSQRKYVLDILDETGLLGSKPVETPMDPNVKLCVDQGELLSSPDQYRRLVGKLNYLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYCIFL 703
            G   T ++ L   L   F  KDLG + YFLGI++     G+ LSQ KY   IL+  G+L  KP+ TP+   +   V   +    P  +R +VG L YLT+TRPDIS+AV++V Q M  P L   + + R++RY+K     GL+   +  L V+AF DSDWAG  S RRSTTG+C FL
Sbjct:   14 GSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of CV090289 vs. TAIR peptide
Match: ATMG00240.1 (| Symbols: ORF111A | Gag-Pol-related retrotransposon family protein | chrM:68918-69253 REVERSE LENGTH=111)

HSP 1 Score: 90.8929 bits (224), Expect = 7.317e-19
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 2

Query:  461 YLTVTRPDISFAVSLVSQFMSAPRLPH*EAVLRIVRYLKAHPGRGLFYRASGHLRVEAFTDSDWAGDPSDRRSTTGYC 694
            YLT+TRPD++FAV+ +SQF SA R    +AV +++ Y+K   G+GLFY A+  L+++AF DSDWA  P  RRS TG+C
Sbjct:    2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of CV090289 vs. DB:swissprot:display
BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
BLAST of CV090289 vs. TrEMBL
BLAST of CV090289 vs. Vitis vinifera peptide
BLAST of CV090289 vs. TAIR peptide

BLAST of CV090289 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
M810_ARATH	6.140e-33	42.94	Uncharacterized mitochondrial protein AtMg00810 OS...	[more]
POLX_TOBAC	4.262e-26	34.71	Retrovirus-related Pol polyprotein from transposon...	[more]
COPIA_DROME	1.283e-22	29.88	Copia protein OS=Drosophila melanogaster GN=GIP PE...	[more]
YCH4_YEAST	4.564e-20	28.63	Putative transposon Ty5-1 protein YCL074W OS=Sacch...	[more]
M240_ARATH	7.286e-18	52.56	Uncharacterized mitochondrial protein AtMg00240 OS...	[more]

BLAST of CV090289 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5


Match Name	E-value	Identity
POPTR_0001s45470.1	5.760e-20	50.55	[more]
POPTR_0017s06250.1	6.820e-13	43.21	[more]
POPTR_0001s21470.1	1.204e-9	43.66	[more]
POPTR_0019s12770.1	3.873e-8	41.89	[more]
POPTR_0004s07530.1	2.510e-7	37.29	[more]

BLAST of CV090289 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
Q0KIN0\|Q0KIN0_SOLDE	2.274e-75	60.00	Integrase core domain containing protein OS=Solanu...	[more]
A5C231\|A5C231_VITVI	3.284e-74	60.43	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BH35\|A5BH35_VITVI	3.284e-74	59.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q0KIP5\|Q0KIP5_SOLDE	4.289e-74	59.15	Polyprotein, putative OS=Solanum demissum GN=SDM1_...	[more]
A5BSQ9\|A5BSQ9_VITVI	5.601e-74	59.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BXY6\|A5BXY6_VITVI	7.315e-74	59.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BBP4\|A5BBP4_VITVI	7.315e-74	59.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B551\|A5B551_VITVI	7.315e-74	59.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B3I0\|A5B3I0_VITVI	7.315e-74	59.57	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5B4S8\|A5B4S8_VITVI	9.554e-74	59.15	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of CV090289 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 6


Match Name	E-value	Identity	Description
GSVIVT01031724001	1.625e-25	45.74	assembled CDS	[more]
GSVIVT01000641001	2.779e-17	44.34	assembled CDS	[more]
GSVIVT01012382001	1.801e-16	57.97	assembled CDS	[more]
GSVIVT01011334001	1.427e-13	36.61	assembled CDS	[more]
GSVIVT01013341001	1.744e-11	46.77	assembled CDS	[more]
GSVIVT01013655001	8.103e-9	43.94	assembled CDS	[more]

BLAST of CV090289 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G23160.1	1.844e-54	44.87	\| Symbols: CRK8 \| cysteine-rich RLK (RECEPTOR-like...	[more]
ATMG00810.1	6.166e-34	42.94	\| Symbols: ORF240B \| DNA/RNA polymerases superfami...	[more]
ATMG00240.1	7.317e-19	52.56	\| Symbols: ORF111A \| Gag-Pol-related retrotranspos...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..127 score: 1.4
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..180 score: 1.2
None	No IPR available	SEG	seg	seg	coord: 45..56 score
None	No IPR available	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..174 score: 1.5
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..53 score: 6.6

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090289 ID=CV090289; Name=CV090289; organism=Vaccinium corymbosum; type=EST; length=705bp
GAAAGCTCTATATGGGCTTAAACAATCTCCGAGGGCTTGGTTTGGGAAGT
TTAGTGATGCTGTCTTGCGATTTGGCATGAAGCGATGTCATTCTGATCAT
TCTGTTTTTTCTCTCACATCTGACCGAGGGAAAATATTATTGATTGTTTA
TGTAGATGATATCATTATTAATGGTGATGATCAGACAGGTATTGATGAGT
TGAAGCTTTTCCTACAGCATCAGTTTCATACCAAAGACTTAGGCAAATTG
AGATATTTCTTGGGTATCGAGGTAGCGCAATCTAAGCATGGTGTTAATCT
ATCACAGCGGAAATATGTGTTGGATATTTTAGATGAGACGGGTTTACTGG
GGTCAAAGCCTGTTGAGACTCCTATGGACCCTAATGTTAAACTGTGTGTT
GATCAGGGGGAGTTGCTCTCTAGTCCTGATCAGTATCGTCGCTTGGTTGG
GAAGTTGAATTATCTTACCGTTACTCGTCCAGATATCTCGTTTGCAGTTA
GTTTGGTTAGCCAATTTATGTCGGCTCCTCGCCTTCCACACTAGGAGGCT
GTTCTAAGAATTGTGAGGTATCTCAAAGCTCACCCAGGACGTGGTTTGTT
TTATAGAGCTAGTGGACACTTGCGGGTTGAGGCCTTCACTGACTCTGATT
GGGCAGGAGACCCATCTGACAGGAGATCCACTACAGGATATTGTATCTTT
CTTGA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2
noIPR	unintegrated