CV090366

EST Overview
NameCV090366
Unique NameCV090366
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length718
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: LSM7_HUMAN (U6 snRNA-associated Sm-like protein LSm7 OS=Homo sapiens GN=LSM7 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.710e-27
Identity = 54/100 (54.00%), Postives = 74/100 (74.00%), Query Frame = 3 
Query:  345 KMSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            K    KE++LDL+K++DK ++VK  GGR+ +G LKG+D LLN VLD  +E++RDP+D  K T+ TRQL L+VCRGT+V+L+ P DG   IPNPF+Q   A
Sbjct:    4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA 103
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: LSM7_MOUSE (U6 snRNA-associated Sm-like protein LSm7 OS=Mus musculus GN=Lsm7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.550e-26
Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 3 
Query:  345 KMSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQ 632
            K    KE++LDL+K++DK ++VK  GGR+ +G LKG+D LLN VLD  +E++RDP+D  K T+ TRQL L+VCRGT+V+L+ P DG   IPNPF+Q
Sbjct:    4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 99
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: LSM7_DICDI (Probable U6 snRNA-associated Sm-like protein LSm7 OS=Dictyostelium discoideum GN=lsm7 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.827e-24
Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 3 
Query:  360 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPF 626
            KE++LDL KF+ K + VK TGGR+V G LKGYDQL+N  LD+  EF+RD EDPL TTD+ R L L+VCRG++VM+V PT+G   I NP+
Sbjct:    9 KESILDLQKFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTQEFIRDAEDPLITTDEKRFLGLVVCRGSSVMMVCPTEGCEPIDNPY 97
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: LSM7_SCHPO (U6 snRNA-associated Sm-like protein LSm7 OS=Schizosaccharomyces pombe GN=lsm7 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.710e-22
Identity = 50/93 (53.76%), Postives = 71/93 (76.34%), Query Frame = 3 
Query:  360 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPD 638
            KE++LDL+++ D+ +Q   TGGRQ+TG LKG+DQL+N VLD+  E LR+PED  K T   R+L L+V RGT ++L++P DG+ EIPNPF+Q +
Sbjct:   22 KESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDG-KLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQAE 113
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: LSM7_YEAST (U6 snRNA-associated Sm-like protein LSm7 OS=Saccharomyces cerevisiae GN=LSM7 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.924e-14
Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 3 
Query:  360 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKT---TDQTRQLXLIVCRGTAVMLVSPTDGT 605
            +E +LDLAK+ D  ++VKL GG+ V G LKGYDQL+N VLD+ VE++ +P+D   T   +   R+L L V RGT ++ +S  +G+
Sbjct:   24 REAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGS 108
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: RUXG_MOUSE (Small nuclear ribonucleoprotein G OS=Mus musculus GN=Snrpg PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.651e-7
Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            +L KF+DK + +KL GGR V G L+G+D  +N V+DE VE        + T+ Q   + ++V RG +++++
Sbjct:    8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRGNSIIML 70
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: RUXG_HUMAN (Small nuclear ribonucleoprotein G OS=Homo sapiens GN=SNRPG PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.651e-7
Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            +L KF+DK + +KL GGR V G L+G+D  +N V+DE VE        + T+ Q   + ++V RG +++++
Sbjct:    8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRGNSIIML 70
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: RUXG_BOVIN (Small nuclear ribonucleoprotein G OS=Bos taurus GN=SNRPG PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.651e-7
Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            +L KF+DK + +KL GGR V G L+G+D  +N V+DE VE        + T+ Q   + ++V RG +++++
Sbjct:    8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRGNSIIML 70
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: RUXG_DROME (Probable small nuclear ribonucleoprotein G OS=Drosophila melanogaster GN=SmG PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.522e-7
Identity = 26/75 (34.67%), Postives = 45/75 (60.00%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTD 599
            ++ K++DK + +KL GGR VTG L+G+D  +N VLD+ VE  +D        +    + ++V RG ++++V   D
Sbjct:    8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD--------NTKNNIGMVVIRGNSIVMVEALD 74
[Close]
BLAST of CV090366 vs. DB:swissprot:display
Match: RUXG_ARATH (Probable small nuclear ribonucleoprotein G OS=Arabidopsis thaliana GN=At2g23930 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 5.906e-7
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R VTGTL+G+DQ +N V+D  VE        +   D+T  + ++V RG +++ V
Sbjct:    9 DLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGMVVIRGNSIVTV 70
[Close]
BLAST of CV090366 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s06850.1 ()

HSP 1 Score: 175.252 bits (443), Expect = 3.452e-44
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+QPDGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
[Close]
BLAST of CV090366 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s27630.2 ()

HSP 1 Score: 175.252 bits (443), Expect = 3.452e-44
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+QPDGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
[Close]
BLAST of CV090366 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s27630.1 ()

HSP 1 Score: 175.252 bits (443), Expect = 3.452e-44
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+QPDGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
[Close]
BLAST of CV090366 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s22770.1 ()

HSP 1 Score: 54.299 bits (129), Expect = 8.881e-8
Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R V GTL+G+DQ +N V+D  VE            D+   + ++V RG +V+ V
Sbjct:   58 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGDEKTDIGMVVLRGNSVVTV 119
[Close]
BLAST of CV090366 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s07880.1 ()

HSP 1 Score: 53.1434 bits (126), Expect = 1.979e-7
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R V GTL+G+DQ +N V+D  V+            D+   + ++V RG +V+ V
Sbjct:   52 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDV---------NGDEKTDIGMVVIRGNSVVTV 113
[Close]
BLAST of CV090366 vs. P. persica 1.0 peptide
Match: ppa013852m ()

HSP 1 Score: 174.096 bits (440), Expect = 5.425e-44
Identity = 88/99 (88.89%), Postives = 90/99 (90.91%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF QPDGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA 99
[Close]
BLAST of CV090366 vs. P. persica 1.0 peptide
Match: ppa014239m ()

HSP 1 Score: 127.102 bits (318), Expect = 7.605e-30
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVC 563
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LIVC
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDSDDPLKTTDQTRRLGLIVC 72
[Close]
BLAST of CV090366 vs. P. persica 1.0 peptide
Match: ppa014360m ()

HSP 1 Score: 122.479 bits (306), Expect = 1.873e-28
Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIV 560
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LI+
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDSDDPLKTTDQTRRLGLIL 71
[Close]
BLAST of CV090366 vs. P. persica 1.0 peptide
Match: ppa013424m ()

HSP 1 Score: 52.373 bits (124), Expect = 2.381e-7
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R V GTL+G+DQ +N V+D  VE            ++   + ++V RG +V+ V
Sbjct:   51 DLKKYMDKKLQIKLNANRMVIGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGMVVIRGNSVVTV 112
[Close]
BLAST of CV090366 vs. TrEMBL
Match: C6SZM9|C6SZM9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.184e-42
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRDP+DPLKTTDQTR L LIVCRGTAVMLVSPTDGT EI NPF+QPDG+
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS 99
[Close]
BLAST of CV090366 vs. TrEMBL
Match: A9PBG1|A9PBG1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_706444 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.500e-42
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+QPDGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
[Close]
BLAST of CV090366 vs. TrEMBL
Match: D7T2Y2|D7T2Y2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032062001 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.676e-42
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 3 
Query:  351 SXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            S  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRDP+DP KTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+QPDGA
Sbjct:   10 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 107
[Close]
BLAST of CV090366 vs. TrEMBL
Match: B9RHF7|B9RHF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1524640 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.676e-42
Identity = 87/99 (87.88%), Postives = 91/99 (91.92%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VE+LRDP+DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+Q DGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQQDGA 99
[Close]
BLAST of CV090366 vs. TrEMBL
Match: D7LQM2|D7LQM2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484298 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.657e-39
Identity = 83/97 (85.57%), Postives = 88/97 (90.72%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPD 638
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEF+RD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+Q +
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQAE 97
[Close]
BLAST of CV090366 vs. TrEMBL
Match: D5AC71|D5AC71_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.657e-39
Identity = 84/99 (84.85%), Postives = 88/99 (88.89%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKF+DKGVQVKLTGGRQVTGTLKGYDQLLN VLDE +EFLRD +DPLKTTDQTR L LIVCRGTAVMLV+PTDGT EIPNPF Q D A
Sbjct:    1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDQDDPLKTTDQTRPLGLIVCRGTAVMLVAPTDGTDEIPNPF-QTDAA 98
[Close]
BLAST of CV090366 vs. TrEMBL
Match: Q9SI54|Q9SI54_ARATH (At2g03870 OS=Arabidopsis thaliana GN=At2g03870 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.311e-38
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFL 629
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEF+RD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFV 94
[Close]
BLAST of CV090366 vs. TrEMBL
Match: Q6ZBS1|Q6ZBS1_ORYSJ (Os08g0177700 protein OS=Oryza sativa subsp. japonica GN=P0583B06.25 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.163e-36
Identity = 82/99 (82.83%), Postives = 86/99 (86.87%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEF R+ +DPLK + +TRQL LIVCRGTAVMLVSPTDGT EI NPF Q DGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFEREQDDPLKLSGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPF-QSDGA 98
[Close]
BLAST of CV090366 vs. TrEMBL
Match: B8BBH1|B8BBH1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28028 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.163e-36
Identity = 82/99 (82.83%), Postives = 86/99 (86.87%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEF R+ +DPLK + +TRQL LIVCRGTAVMLVSPTDGT EI NPF Q DGA
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFEREQDDPLKLSGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPF-QSDGA 98
[Close]
BLAST of CV090366 vs. TrEMBL
Match: A9T9R4|A9T9R4_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192923 PE=4 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.825e-36
Identity = 78/95 (82.11%), Postives = 83/95 (87.37%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQ 632
            MS  KETVLDLAKFVD+GV VKL+GGRQVTG LKGYDQLLN VLDE  E LRD +DP+KTTDQ RQL LIVCRGTAVMLV+PTDGT EIPNPFLQ
Sbjct:    1 MSGRKETVLDLAKFVDRGVSVKLSGGRQVTGILKGYDQLLNLVLDEATENLRDSDDPMKTTDQIRQLGLIVCRGTAVMLVAPTDGTEEIPNPFLQ 95
[Close]
BLAST of CV090366 vs. Vitis vinifera peptide
Match: GSVIVT01032062001 (assembled CDS)

HSP 1 Score: 174.481 bits (441), Expect = 3.545e-44
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 3 
Query:  351 SXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFLQPDGA 644
            S  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEFLRDP+DP KTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+QPDGA
Sbjct:   10 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 107
[Close]
BLAST of CV090366 vs. Vitis vinifera peptide
Match: GSVIVT01033867001 (assembled CDS)

HSP 1 Score: 52.373 bits (124), Expect = 2.032e-7
Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R V GTL+G+DQ +N V+D  VE            ++   + ++V RG +V+ V
Sbjct:    9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGNEKTDIGMVVIRGNSVVTV 70
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BLAST of CV090366 vs. TAIR peptide
Match: AT2G03870.1 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr2:1180306-1181256 FORWARD LENGTH=99)

HSP 1 Score: 162.925 bits (411), Expect = 1.559e-40
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFL 629
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEF+RD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFV 94
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BLAST of CV090366 vs. TAIR peptide
Match: AT2G03870.2 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr2:1180306-1181256 FORWARD LENGTH=99)

HSP 1 Score: 162.925 bits (411), Expect = 1.559e-40
Identity = 82/94 (87.23%), Postives = 86/94 (91.49%), Query Frame = 3 
Query:  348 MSXXKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLVSPTDGTXEIPNPFL 629
            MS  KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN VLDE VEF+RD +DPLKTTDQTR+L LIVCRGTAVMLVSPTDGT EI NPF+
Sbjct:    1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFV 94
[Close]
BLAST of CV090366 vs. TAIR peptide
Match: AT2G23930.1 (| Symbols: SNRNP-G | probable small nuclear ribonucleoprotein G | chr2:10182353-10183026 FORWARD LENGTH=80)

HSP 1 Score: 54.6842 bits (130), Expect = 5.981e-8
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R VTGTL+G+DQ +N V+D  VE        +   D+T  + ++V RG +++ V
Sbjct:    9 DLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGMVVIRGNSIVTV 70
[Close]
BLAST of CV090366 vs. TAIR peptide
Match: AT3G11500.1 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:3621626-3622474 REVERSE LENGTH=79)

HSP 1 Score: 53.1434 bits (126), Expect = 1.740e-7
Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 3 
Query:  375 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNXVLDEXVEFLRDPEDPLKTTDQTRQLXLIVCRGTAVMLV 587
            DL K++DK +Q+KL   R V GTL+G+DQ +N V+D  VE            D    + ++V RG +++ V
Sbjct:    9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGDDKTDIGMVVIRGNSIVTV 70
The following BLAST results are available for this feature:
BLAST of CV090366 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
LSM7_HUMAN6.710e-2754.00U6 snRNA-associated Sm-like protein LSm7 OS=Homo s... [more]
LSM7_MOUSE2.550e-2655.21U6 snRNA-associated Sm-like protein LSm7 OS=Mus mu... [more]
LSM7_DICDI1.827e-2459.55Probable U6 snRNA-associated Sm-like protein LSm7 ... [more]
LSM7_SCHPO1.710e-2253.76U6 snRNA-associated Sm-like protein LSm7 OS=Schizo... [more]
LSM7_YEAST2.924e-1445.88U6 snRNA-associated Sm-like protein LSm7 OS=Saccha... [more]
RUXG_MOUSE2.651e-736.62Small nuclear ribonucleoprotein G OS=Mus musculus ... [more]
RUXG_HUMAN2.651e-736.62Small nuclear ribonucleoprotein G OS=Homo sapiens ... [more]
RUXG_BOVIN2.651e-736.62Small nuclear ribonucleoprotein G OS=Bos taurus GN... [more]
RUXG_DROME4.522e-734.67Probable small nuclear ribonucleoprotein G OS=Dros... [more]
RUXG_ARATH5.906e-739.44Probable small nuclear ribonucleoprotein G OS=Arab... [more]
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BLAST of CV090366 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
POPTR_0009s06850.13.452e-4488.89[more]
POPTR_0001s27630.23.452e-4488.89[more]
POPTR_0001s27630.13.452e-4488.89[more]
POPTR_0006s22770.18.881e-838.03[more]
POPTR_0016s07880.11.979e-736.62[more]
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BLAST of CV090366 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
ppa013852m5.425e-4488.89[more]
ppa014239m7.605e-3088.89[more]
ppa014360m1.873e-2887.32[more]
ppa013424m2.381e-736.62[more]
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BLAST of CV090366 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
C6SZM9|C6SZM9_SOYBN1.184e-4288.89Putative uncharacterized protein OS=Glycine max PE... [more]
A9PBG1|A9PBG1_POPTR4.500e-4288.89Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T2Y2|D7T2Y2_VITVI7.676e-4288.78Whole genome shotgun sequence of line PN40024, sca... [more]
B9RHF7|B9RHF7_RICCO7.676e-4287.88Putative uncharacterized protein OS=Ricinus commun... [more]
D7LQM2|D7LQM2_ARALY4.657e-3985.57Putative uncharacterized protein OS=Arabidopsis ly... [more]
D5AC71|D5AC71_PICSI4.657e-3984.85Putative uncharacterized protein OS=Picea sitchens... [more]
Q9SI54|Q9SI54_ARATH2.311e-3887.23At2g03870 OS=Arabidopsis thaliana GN=At2g03870 PE=... [more]
Q6ZBS1|Q6ZBS1_ORYSJ2.163e-3682.83Os08g0177700 protein OS=Oryza sativa subsp. japoni... [more]
B8BBH1|B8BBH1_ORYSI2.163e-3682.83Putative uncharacterized protein OS=Oryza sativa s... [more]
A9T9R4|A9T9R4_PHYPA2.825e-3682.11Predicted protein OS=Physcomitrella patens subsp. ... [more]
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BLAST of CV090366 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2
Match NameE-valueIdentityDescription
GSVIVT010320620013.545e-4488.78assembled CDS[more]
GSVIVT010338670012.032e-736.62assembled CDS[more]
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BLAST of CV090366 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G03870.11.559e-4087.23| Symbols: | Small nuclear ribonucleoprotein fami... [more]
AT2G03870.21.559e-4087.23| Symbols: | Small nuclear ribonucleoprotein fami... [more]
AT2G23930.15.981e-839.44| Symbols: SNRNP-G | probable small nuclear ribonu... [more]
AT3G11500.11.740e-736.62| Symbols: | Small nuclear ribonucleoprotein fami... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..12
score: NAcoord: 24..31
score
NoneNo IPR availableSEGsegsegcoord: 8..24
score: NAcoord: 47..70
score: NAcoord: 88..94
score
NoneNo IPR availableGENE3D2.30.30.100no descriptioncoord: 15..104
score: 2.1
NoneNo IPR availablePANTHERPTHR10553SMALL NUCLEAR RIBONUCLEOPROTEINcoord: 6..111
score: 4.4
NoneNo IPR availablePANTHERPTHR10553:SF1U6 SNRNA-ASSOCIATED SM-LIKE PROTEINcoord: 6..111
score: 4.4
NoneNo IPR availableSEGsegsegcoord: 27..43
score
NoneNo IPR availableSEGsegsegcoord: 5..17
score: NAcoord: 24..43
score
IPR001163Like-Sm ribonucleoprotein (LSM) domainPFAMPF01423LSMcoord: 22..94
score: 1.3
IPR006649Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-typeSMARTSM00651no descriptioncoord: 21..94
score: 2.5
IPR010920Like-Sm ribonucleoprotein (LSM)-related domainSUPERFAMILY50182Sm-like ribonucleoproteinscoord: 15..100
score: 4.4
IPR017132U6 snRNA-associated Sm-like protein LSm7PIRPIRSF037188U6 snRNA-associated Sm-like protein LSm7coord: 13..110
score: 6.6

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090366 ID=CV090366; Name=CV090366; organism=Vaccinium corymbosum; type=EST; length=718bp
GTCTTGTACGCCCCATTCCNAAGTCACCNACCGACCTCTCTTCTCTCTTC
TTCTCTTCTCCCTCTCCCACCGATGAATCTCTGATCTCTCTAGTCTCTAC
TCCAGTCTTGNACATCAAGAANAAGGAAAAAGATGCCCACCTGACCTTAN
CTCTCTACTCNACAGTCTTGCNCAGCNTANCTTGGAATACGACNGAATCN
AGTNAATCGACGGTCGACATCTACTCTACTCGACAATCGACATCTACTCT
CTCTACTGATAGAAACTGGNTTANCAATTGGNCACTTCAACTTCATAATT
TTGAGCTGTAATCTNACCTATTGAAAGAAGCTCGATCACTCCGTAAAATG
TCANGCANGAAAGAAACAGTCCTGGATTTGGCAAAGTTTGTTGACAAGGG
TGTCCAAGTGAAGCTTACTGGTGGAAGACAAGTGACAGGGACCTTGAAAG
GATATGATCAGTTATTGAACCNTGTCTTGGATGAAGNTGTAGAGTTCCTA
AGAGATCCAGAGGATCCACTGAAGACCACTGATCAGACCAGGCAGCTTGN
CTTAATTGTTTGTAGGGGAACTGCAGTGATGCTTGTATCACCAACTGATG
GAACANATGAGATTCCTAATCCTTTTCTCCAGCCAGATGGGGCCTAAATA
TATCGGAACCTTTTCTCCTNCCTGCCCTAAAACTAGTTTCTTCTATTGTT
GNCACTTGGCTTACNAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K12626LSM7; U6 snRNA-associated Sm-like protein LSm7
Vocabulary: KEGG PATHWAY
TermDefinition
ko03020RNA polymerase
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR001163Sm_dom_euk/arc
IPR006649Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
IPR010920LSM_dom_sf
IPR017132Lsm7