CV090418 | GDV

EST Overview


Name	CV090418
Unique Name	CV090418
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	697

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s24690.1 ()

HSP 1 Score: 84.3445 bits (207), Expect = 7.671e-17
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 2

Query:  464 SWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKK 694
            SWLP GW  E +VRTSGA+AG+ DKYYIEPVSGR+FRSK +V+Y+L+TG+   KKR         + N  E S S K
Sbjct:   72 SWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTL--KKRGKVAENVDADTNSAENSKSSK 146

[Close]

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s24690.3 ()

HSP 1 Score: 80.8777 bits (198), Expect = 8.481e-16
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 2

Query:  464 SWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKS 682
            SWLP GW  E +VRTSGA+AG+ DKYYIEPVSGR+FRSK +V+Y+L+TG+   KKR         + N  +KS
Sbjct:   72 SWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTL--KKRGKVAENVDADTNVRKKS 142

[Close]

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s24690.2 ()

HSP 1 Score: 80.8777 bits (198), Expect = 8.481e-16
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 2

Query:  464 SWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEK 679
            SWLP GW  E +VRTSGA+AG+ DKYYIEPVSGR+FRSK +V+Y+L+TG+   KKR         + N+  K
Sbjct:   72 SWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTL--KKRGKVAENVDADTNKQTK 141

[Close]

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0012s13490.1 ()

HSP 1 Score: 55.0694 bits (131), Expect = 4.984e-8
Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 2

Query:  452 PERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKR 631
            P+   WLPEGW  E KVR +G      DK+Y  P  G +F SK+EV  +L  GS PN ++
Sbjct:    4 PKSDDWLPEGWRVEVKVRNNGKK----DKFYFPPSGGCRFNSKIEVSRYL-NGSHPNSEQ 58

[Close]

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0015s13470.1 ()

HSP 1 Score: 54.299 bits (129), Expect = 8.501e-8
Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 2

Query:  452 PERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKK 628
            P+   WLPEGW  E KVR SG      DK+Y  P  G +F SK+EV  +L  GS P  +
Sbjct:    4 PKSDDWLPEGWRVEVKVRNSGKK----DKFYFPPTGGFRFNSKIEVSRYL-NGSHPKSE 57

[Close]

BLAST of CV090418 vs. TrEMBL
Match: B9T3M7|B9T3M7_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1165760 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.985e-15
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 2

Query:  413 RKKGQPQVASGALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXN-----GNRPEKSGSK 691
            R+K    +A     +  +WLP GW  E +VR SGA+AG+ DKYYIEPV+GR+FRSK EV+YFL+TG+K   KR         N     G++  K  SK
Sbjct:   81 RRKVPVTMAPAPSADSANWLPPGWLVEDRVRASGATAGTVDKYYIEPVTGRRFRSKKEVQYFLETGTKKKTKRGMENSEGDVNFTESPGSQKSKKASK 178

[Close]

BLAST of CV090418 vs. TrEMBL
Match: A9PAN4|A9PAN4_POPTR (Methyl binding domain protein OS=Populus trichocarpa GN=MBD905 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.850e-15
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 2

Query:  464 SWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKK 694
            SWLP GW  E +VRTSGA+AG+ DKYYIEPVSGR+FRSK +V+Y+L+TG+   KKR         + N  E S S K
Sbjct:   72 SWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYYLETGTL--KKRGKVAENVDADTNSAENSKSSK 146

[Close]

BLAST of CV090418 vs. TrEMBL
Match: D7SKF1|D7SKF1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024954001 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.422e-13
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2

Query:  455 ERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTG---SKPNK 625
            ER  WLP GW  E +VR+SGASAGS DKY+IEP++GR+FRSK EV Y+L+TG    KP K
Sbjct:    5 EREDWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKK 64

[Close]

BLAST of CV090418 vs. TrEMBL
Match: B9HPH2|B9HPH2_POPTR (Methyl binding domain protein OS=Populus trichocarpa GN=MBD904 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.422e-13
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 2

Query:  410 PRKKGQPQVASGALPER--------PSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNK 625
            P  KG  Q  +    +R         SWLP GW  E ++RTSGA+AG+ DKYYI+P SGRKFRSK +V+Y+L+TG+   K
Sbjct:   46 PNNKGNQQPVTPVRAKRRSSETTIETSWLPPGWVVEDRIRTSGATAGTVDKYYIDPASGRKFRSKKDVQYYLETGTLKKK 125

[Close]

BLAST of CV090418 vs. TrEMBL
Match: Q9LTJ1|Q9LTJ1_ARATH (At5g59380 OS=Arabidopsis thaliana GN=At5g59380 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.054e-12
Identity = 59/180 (32.78%), Postives = 76/180 (42.22%), Query Frame = 2

Query:  164 VADDDGDQIPPDPLLKSGTFILXXXXXXXXXXXXXXNGVAADPVQISVDREPPEQC---TSPPGVSKXXXXXXXXXXXXXXXXXXPRKKGQPQVASGALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKK 694
            ++D      PPDPLL SG FI                  A D    S  +  P Q     S  G S                    RK+  P           +WLP GW  E K+RTSGA+AGS DKYY EP +GRKFRS+ EV Y+L+ G+  +K+ +        N +  E  GS +
Sbjct:    1 MSDSVAGDFPPDPLLASGAFI----------------SSAGDGTLDSSAKRRPIQGGIGISGSGESVRIGMANGTDQVNHQTESKSRKRAAPG---------DNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGT--SKRGTKKAENTYFNPDHFEGQGSNR 153

[Close]

BLAST of CV090418 vs. TrEMBL
Match: D7MSE3|D7MSE3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919168 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.575e-12
Identity = 52/157 (33.12%), Postives = 69/157 (43.95%), Query Frame = 2

Query:  164 VADDDGDQIPPDPLLKSGTFI-------LXXXXXXXXXXXXXXNGVAADPVQISVDREPPEQCTSPPGVSKXXXXXXXXXXXXXXXXXXPRKKGQPQVASGALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGS 613
            ++D      PPDPLL SG FI       L                 + + V+I +     +   SP   S                      K + + A G      +WLP GW  E K+RTSGA+AGS DKYY EP +GRKFRS+ EV Y+L+ G+
Sbjct:    1 MSDSVSGDFPPDPLLASGAFISSAGDGTLDSSSKRRPIQGGIGVSGSGESVRIGMANGTDQVNPSPDSSSHQA-----------------ESKSRKRAAPG-----DNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGT 135

[Close]

BLAST of CV090418 vs. TrEMBL
Match: Q9SNC0|Q9SNC0_ARATH (Putative uncharacterized protein At3g46580 OS=Arabidopsis thaliana GN=F12A12.100 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.331e-11
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 2

Query:  446 ALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKKK 697
            A P   +WLP  W  E +VRTSG  AG+ DK+Y EP++GRKFRSK EV Y+L+ G+ P KK          +    E  GS ++
Sbjct:   27 ATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGT-PKKKSVKTAENGDSHSEHSEGRGSARR 109

[Close]

BLAST of CV090418 vs. TrEMBL
Match: Q8LCG6|Q8LCG6_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.331e-11
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 2

Query:  446 ALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKKK 697
            A P   +WLP  W  E +VRTSG  AG+ DK+Y EP++GRKFRSK EV Y+L+ G+ P KK          +    E  GS ++
Sbjct:   27 ATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGT-PKKKSVKTAENGDSHSEHSEGRGSARR 109

[Close]

BLAST of CV090418 vs. TrEMBL
Match: D7LN21|D7LN21_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485028 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.472e-10
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 2

Query:  446 ALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGS 613
            A P   +WLP  W  E +VRTSG  AG+ DK+Y EP++GRKFRSK EV Y+L+ G+
Sbjct:   27 ATPGDDNWLPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGA 82

[Close]

BLAST of CV090418 vs. Vitis vinifera peptide
Match: GSVIVT01024954001 (assembled CDS)

HSP 1 Score: 80.4925 bits (197), Expect = 6.746e-16
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2

Query:  455 ERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTG---SKPNK 625
            ER  WLP GW  E +VR+SGASAGS DKY+IEP++GR+FRSK EV Y+L+TG    KP K
Sbjct:    5 EREDWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKK 64

[Close]

BLAST of CV090418 vs. Vitis vinifera peptide
Match: GSVIVT01024953001 (assembled CDS)

HSP 1 Score: 56.6102 bits (135), Expect = 1.043e-8
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 2

Query:  455 ERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNG 664
            ERPSWLP  W  E + R  G  AG  D ++++P+ G +FRSK +V  FLQT   P +  +        NG
Sbjct:   66 ERPSWLPPDWHVEKETRLQGKKAGYLDSFFVDPM-GNRFRSKKKVLSFLQTEVLPRRTANKNPNPAMANG 134

[Close]

BLAST of CV090418 vs. TAIR peptide
Match: AT5G59380.1 (| Symbols: MBD6, ATMBD6 | methyl-CPG-binding domain 6 | chr5:23952321-23953485 FORWARD LENGTH=225)

HSP 1 Score: 76.6406 bits (187), Expect = 1.407e-14
Identity = 59/180 (32.78%), Postives = 76/180 (42.22%), Query Frame = 2

Query:  164 VADDDGDQIPPDPLLKSGTFILXXXXXXXXXXXXXXNGVAADPVQISVDREPPEQC---TSPPGVSKXXXXXXXXXXXXXXXXXXPRKKGQPQVASGALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKK 694
            ++D      PPDPLL SG FI                  A D    S  +  P Q     S  G S                    RK+  P           +WLP GW  E K+RTSGA+AGS DKYY EP +GRKFRS+ EV Y+L+ G+  +K+ +        N +  E  GS +
Sbjct:    1 MSDSVAGDFPPDPLLASGAFI----------------SSAGDGTLDSSAKRRPIQGGIGISGSGESVRIGMANGTDQVNHQTESKSRKRAAPG---------DNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGT--SKRGTKKAENTYFNPDHFEGQGSNR 153

[Close]

BLAST of CV090418 vs. TAIR peptide
Match: AT3G46580.1 (| Symbols: MBD05, MBD5, ATMBD5 | methyl-CPG-binding domain protein 5 | chr3:17148397-17149328 FORWARD LENGTH=182)

HSP 1 Score: 73.9442 bits (180), Expect = 9.121e-14
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 2

Query:  446 ALPERPSWLPEGWGAECKVRTSGASAGSFDKYYIEPVSGRKFRSKVEVEYFLQTGSKPNKKRSXXXXXXXXNGNRPEKSGSKKK 697
            A P   +WLP  W  E +VRTSG  AG+ DK+Y EP++GRKFRSK EV Y+L+ G+ P KK          +    E  GS ++
Sbjct:   27 ATPGDDNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGT-PKKKSVKTAENGDSHSEHSEGRGSARR 109

The following BLAST results are available for this feature:

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
BLAST of CV090418 vs. TrEMBL
BLAST of CV090418 vs. Vitis vinifera peptide
BLAST of CV090418 vs. TAIR peptide

BLAST of CV090418 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5


Match Name	E-value	Identity
POPTR_0001s24690.1	7.671e-17	55.84	[more]
POPTR_0001s24690.3	8.481e-16	56.16	[more]
POPTR_0001s24690.2	8.481e-16	55.56	[more]
POPTR_0012s13490.1	4.984e-8	45.00	[more]
POPTR_0015s13470.1	8.501e-8	45.76	[more]

BLAST of CV090418 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9


Match Name	E-value	Identity	Description
B9T3M7\|B9T3M7_RICCO	1.985e-15	45.92	DNA binding protein, putative OS=Ricinus communis ...	[more]
A9PAN4\|A9PAN4_POPTR	9.850e-15	55.84	Methyl binding domain protein OS=Populus trichocar...	[more]
D7SKF1\|D7SKF1_VITVI	1.422e-13	63.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HPH2\|B9HPH2_POPTR	1.422e-13	48.75	Methyl binding domain protein OS=Populus trichocar...	[more]
Q9LTJ1\|Q9LTJ1_ARATH	2.054e-12	32.78	At5g59380 OS=Arabidopsis thaliana GN=At5g59380 PE=...	[more]
D7MSE3\|D7MSE3_ARALY	4.575e-12	33.12	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9SNC0\|Q9SNC0_ARATH	1.331e-11	44.05	Putative uncharacterized protein At3g46580 OS=Arab...	[more]
Q8LCG6\|Q8LCG6_ARATH	1.331e-11	44.05	Putative uncharacterized protein OS=Arabidopsis th...	[more]
D7LN21\|D7LN21_ARALY	1.472e-10	55.36	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of CV090418 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2


Match Name	E-value	Identity	Description
GSVIVT01024954001	6.746e-16	63.33	assembled CDS	[more]
GSVIVT01024953001	1.043e-8	40.00	assembled CDS	[more]

BLAST of CV090418 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G59380.1	1.407e-14	32.78	\| Symbols: MBD6, ATMBD6 \| methyl-CPG-binding domai...	[more]
AT3G46580.1	9.121e-14	44.05	\| Symbols: MBD05, MBD5, ATMBD5 \| methyl-CPG-bindin...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 39..61 score
None	No IPR available	PANTHER	PTHR17006	METHYL-CPG-BINDING PROTEIN 2	coord: 157..203 score: 3.3
None	No IPR available	SEG	seg	seg	coord: 21..38 score: NAcoord: 44..52 score: NAcoord: 77..90 score: NAcoord: 119..136 score: NAcoord: 212..219 score
None	No IPR available	SEG	seg	seg	coord: 5..11 score: NAcoord: 25..39 score: NAcoord: 42..57 score
None	No IPR available	SEG	seg	seg	coord: 9..20 score
None	No IPR available	SEG	seg	seg	coord: 45..63 score
IPR001739	Methyl-CpG DNA binding	GENE3D	3.30.890.10	no description	coord: 140..202 score: 3.5
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 151..210 score: 7.7
IPR001739	Methyl-CpG DNA binding	PROFILE	PS50982	MBD	coord: 147..220 score: 14
IPR016177	DNA-binding, integrase-type	SUPERFAMILY	54171	DNA-binding domain	coord: 128..212 score: 3.6

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090418 ID=CV090418; Name=CV090418; organism=Vaccinium corymbosum; type=EST; length=697bp
CATCCCAGAACGCCCCGTGTATATCATCGATTCATCTATCTGGGTTTCAG
TCAGTCGCTGTTTTTTTTCTTATTTCCTTTCCTTCGGCTTTTCACTCATG
TCTTCGACTACGTCCCATCTGTTCGAGTACGACGATGAAGACCCGCCTGA
ACCCGAATACTTCGTCGCCGACGACGACGGCGATCAAATCCCGCCGGATC
CTCTATTGAAGTCCGGTACATTCATCCTCGAACCCACAACCCTAACAACA
GAACTACCCCAAACAACTCAAAACGGCGTTGCAGCAGATCCCGTACAGAT
CAGCGTAGATCGCGAACCACCGGAGCAGTGTACGAGTCCACCGGGTGTCT
CCAAGAGTACGGCGGAAAGAGTGACGTCGTCTGCCGCAGCCGCAGGTGCG
GAGTCGACGCCAAGGAAGAAGGGACAGCCGCAGGTGGCTTCTGGTGCGTT
GCCCGAGAGACCGAGTTGGTTGCCGGAGGGTTGGGGCGCGGAATGCAAGG
TCCGCACGTCTGGTGCCTCCGCTGGATCTTTTGACAAGTATTACATTGAA
CCAGTATCAGGCCGCAAATTCAGGTCAAAAGTAGAGGTGGAGTATTTTCT
TCAAACAGGGAGTAAGCCAAACAAGAAACGATCTGATGCCGATGCTGATG
CCGATGCCAATGGCAATCGTCCTGAGAAATCTGGTTCAAAGAAGAAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR001739	Methyl_CpG_DNA-bd
IPR016177	DNA-bd_dom_sf