CV090515

EST Overview
NameCV090515
Unique NameCV090515
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length830
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090515 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s03940.1 ()

HSP 1 Score: 155.606 bits (392), Expect = 3.533e-38
Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHI+DVEVRETKMMG SPIII+ FQTQQVHCVRDRHG ITEGG+DTIHTVYYAWAM+ VDAE+LG GA++PIW+L EMQQ+G+ TLI
Sbjct:  393 FDNKILHITDVEVRETKMMGTSPIIIVVFQTQQVHCVRDRHGAITEGGQDTIHTVYYAWAMRQVDAEELGGGAIYPIWKLMEMQQLGVQTLI 484          
BLAST of CV090515 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s24590.1 ()

HSP 1 Score: 147.132 bits (370), Expect = 1.256e-35
Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHISDVEVRE KMMG SP+II+AFQTQQVHC+RD++G ITEGG+DTIHTVYYAWAM+ VD E+LG GA++PIW+L EMQQ+G+ +LI
Sbjct:  394 FDNKILHISDVEVREIKMMGTSPLIIVAFQTQQVHCIRDQNGAITEGGQDTIHTVYYAWAMRQVDPEELGGGAIYPIWKLMEMQQLGVQSLI 485          
BLAST of CV090515 vs. P. persica 1.0 peptide
Match: ppa004998m ()

HSP 1 Score: 150.599 bits (379), Expect = 8.071e-37
Identity = 68/92 (73.91%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHISD EV+ETKMMGDSPIII+ F+TQQV+CVRD++G +T+GGKDTIHTVYYAWAMQ VD E+LGEGA++PIWR+REMQQ G+  LI
Sbjct:  391 FDHKILHISDAEVKETKMMGDSPIIIVMFRTQQVYCVRDKNGAVTDGGKDTIHTVYYAWAMQQVDPEELGEGAIYPIWRVREMQQFGVQALI 482          
BLAST of CV090515 vs. TrEMBL
Match: B9GS13|B9GS13_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830077 PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.902e-36
Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHI+DVEVRETKMMG SPIII+ FQTQQVHCVRDRHG ITEGG+DTIHTVYYAWAM+ VDAE+LG GA++PIW+L EMQQ+G+ TLI
Sbjct:  393 FDNKILHITDVEVRETKMMGTSPIIIVVFQTQQVHCVRDRHGAITEGGQDTIHTVYYAWAMRQVDAEELGGGAIYPIWKLMEMQQLGVQTLI 484          
BLAST of CV090515 vs. TrEMBL
Match: D7U300|D7U300_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028335001 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.426e-35
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 2
Query:  497 LFSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            +F  +ILHISDVEVRETKMMG SPIII+AFQTQQV+CVR   G+I EGGKDTIHTVYYAWAMQ VDAE+LGEGA++PIWRLREMQQ+G+  LI
Sbjct:  392 IFDNKILHISDVEVRETKMMGTSPIIIVAFQTQQVYCVRSADGSIKEGGKDTIHTVYYAWAMQQVDAEELGEGAIYPIWRLREMQQLGVQALI 484          
BLAST of CV090515 vs. TrEMBL
Match: B9SF39|B9SF39_RICCO (Mitochondrial import inner membrane translocase subunit tim44, putative OS=Ricinus communis GN=RCOM_1213600 PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 7.079e-35
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHIS+VEVRETKMMG SPIII+AFQTQQVHCVRDR G ITEGG+DTIHTVYYAWAMQ V+ E+LG GA++PIW+LREMQQ+G+  LI
Sbjct:  395 FDNKILHISEVEVRETKMMGTSPIIIVAFQTQQVHCVRDRDGAITEGGQDTIHTVYYAWAMQQVEPEELGGGAIYPIWKLREMQQLGIQALI 486          
BLAST of CV090515 vs. TrEMBL
Match: B9H8M3|B9H8M3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831627 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.744e-33
Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHISDVEVRE KMMG SP+II+AFQTQQVHC+RD++G ITEGG+DTIHTVYYAWAM+ VD E+LG GA++PIW+L EMQQ+G+ +LI
Sbjct:  394 FDNKILHISDVEVREIKMMGTSPLIIVAFQTQQVHCIRDQNGAITEGGQDTIHTVYYAWAMRQVDPEELGGGAIYPIWKLMEMQQLGVQSLI 485          
BLAST of CV090515 vs. TrEMBL
Match: D7LIN4|D7LIN4_ARALY (Attim44-2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482583 PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 7.581e-29
Identity = 58/92 (63.04%), Postives = 77/92 (83.70%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  ++LH+S+VE++ETKMMG SP+II+ FQTQ++ CVRD++G I EGG+DTIHTVYY WAMQ V+A +LGE A++PIWRLREM + G+  LI
Sbjct:  378 FDHKLLHVSEVEIKETKMMGTSPVIIVRFQTQEIFCVRDQNGNIKEGGQDTIHTVYYDWAMQQVEAAELGEDAIYPIWRLREMLRAGVQALI 469          
BLAST of CV090515 vs. TrEMBL
Match: Q69V11|Q69V11_ORYSJ (Mitochondrial inner membrane translocating protein-like protein OS=Oryza sativa subsp. japonica GN=P0492E07.122 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.206e-28
Identity = 59/93 (63.44%), Postives = 79/93 (84.95%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKL-GEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHISD +VRETKMMG +PIII+ FQTQQ++CVRDR G +TEGG+DTI TV+YAWAMQL+D++++  E + +P+WRLRE+QQ+G+  LI
Sbjct:  383 FDHKILHISDADVRETKMMGSTPIIIVGFQTQQIYCVRDREGQVTEGGQDTIQTVFYAWAMQLMDSDEVPEEESYYPVWRLREIQQVGIKALI 475          
BLAST of CV090515 vs. TrEMBL
Match: B8B5E7|B8B5E7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25725 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.206e-28
Identity = 59/93 (63.44%), Postives = 79/93 (84.95%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKL-GEGALFPIWRLREMQQMGMXTLI 775
            F  +ILHISD +VRETKMMG +PIII+ FQTQQ++CVRDR G +TEGG+DTI TV+YAWAMQL+D++++  E + +P+WRLRE+QQ+G+  LI
Sbjct:  383 FDHKILHISDADVRETKMMGSTPIIIVGFQTQQIYCVRDREGQVTEGGQDTIQTVFYAWAMQLMDSDEVPEEESYYPVWRLREIQQVGIKALI 475          
BLAST of CV090515 vs. TrEMBL
Match: Q8S8E5|Q8S8E5_ARATH (Putative uncharacterized protein At2g36070 OS=Arabidopsis thaliana GN=At2g36070 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.762e-28
Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  ++LH+S+V+++ETKMMG +P+II+ FQTQ++ CVRD+ G I EGG+DTIHTVYY WAMQ VDA +LGE A++PIWRLREM + G+  LI
Sbjct:  408 FDHKLLHVSEVDIQETKMMGTTPVIIVRFQTQEIFCVRDQDGKIKEGGQDTIHTVYYDWAMQQVDAAELGEDAIYPIWRLREMLRAGVQALI 499          
BLAST of CV090515 vs. TrEMBL
Match: Q5XF06|Q5XF06_ARATH (At2g36070 OS=Arabidopsis thaliana GN=At2g36070 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.762e-28
Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  ++LH+S+V+++ETKMMG +P+II+ FQTQ++ CVRD+ G I EGG+DTIHTVYY WAMQ VDA +LGE A++PIWRLREM + G+  LI
Sbjct:  378 FDHKLLHVSEVDIQETKMMGTTPVIIVRFQTQEIFCVRDQDGKIKEGGQDTIHTVYYDWAMQQVDAAELGEDAIYPIWRLREMLRAGVQALI 469          
BLAST of CV090515 vs. TrEMBL
Match: D7L3P3|D7L3P3_ARALY (Mitochondrial import inner membrane translocase subunit TIM44 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480879 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.418e-28
Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  ++LHISDV V  TKMMGDSPIII  FQTQ+++CVRD +G I EGG+DTIHTVY+ WAMQ V+A + GE A++PIWRLREM++ G+  LI
Sbjct:  386 FDNKLLHISDVRVSVTKMMGDSPIIIAKFQTQEIYCVRDENGEIQEGGQDTIHTVYHEWAMQQVEATEFGEDAIYPIWRLREMRRNGVQALI 477          
BLAST of CV090515 vs. Vitis vinifera peptide
Match: GSVIVT01028335001 (assembled CDS)

HSP 1 Score: 154.066 bits (388), Expect = 6.218e-38
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 2
Query:  497 LFSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            +F  +ILHISDVEVRETKMMG SPIII+AFQTQQV+CVR   G+I EGGKDTIHTVYYAWAMQ VDAE+LGEGA++PIWRLREMQQ+G+  LI
Sbjct:  392 IFDNKILHISDVEVRETKMMGTSPIIIVAFQTQQVYCVRSADGSIKEGGKDTIHTVYYAWAMQQVDAEELGEGAIYPIWRLREMQQLGVQALI 484          
BLAST of CV090515 vs. TAIR peptide
Match: AT2G36070.1 (| Symbols: ATTIM44-2, TIM44-2 | translocase inner membrane subunit 44-2 | chr2:15145119-15147895 REVERSE LENGTH=469)

HSP 1 Score: 129.413 bits (324), Expect = 2.383e-30
Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 2
Query:  500 FSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            F  ++LH+S+V+++ETKMMG +P+II+ FQTQ++ CVRD+ G I EGG+DTIHTVYY WAMQ VDA +LGE A++PIWRLREM + G+  LI
Sbjct:  378 FDHKLLHVSEVDIQETKMMGTTPVIIVRFQTQEIFCVRDQDGKIKEGGQDTIHTVYYDWAMQQVDAAELGEDAIYPIWRLREMLRAGVQALI 469          
BLAST of CV090515 vs. TAIR peptide
Match: AT2G20510.1 (| Symbols: ATTIM44-1, TIM44-1 | translocase inner membrane subunit 44-1 | chr2:8836018-8838598 REVERSE LENGTH=472)

HSP 1 Score: 127.102 bits (318), Expect = 1.183e-29
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 2
Query:  497 LFSMQILHISDVEVRETKMMGDSPIIILAFQTQQVHCVRDRHGTITEGGKDTIHTVYYAWAMQLVDAEKLGEGALFPIWRLREMQQMGMXTLI 775
            LF  ++LHIS+V V  TKMMGDSPIII  FQTQ+++CVRD +G I EGG+DTIHTVY+ WAMQ V+  +LGE A++PIWRLREM + G+  LI
Sbjct:  380 LFDNKLLHISEVSVSVTKMMGDSPIIIAKFQTQEIYCVRDENGEIQEGGQDTIHTVYHEWAMQQVETTELGEDAIYPIWRLREMCRNGVQALI 472          
The following BLAST results are available for this feature:
BLAST of CV090515 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0002s03940.13.533e-3878.26[more]
POPTR_0005s24590.11.256e-3572.83[more]
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BLAST of CV090515 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa004998m8.071e-3773.91[more]
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BLAST of CV090515 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
B9GS13|B9GS13_POPTR4.902e-3678.26Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U300|D7U300_VITVI1.426e-3578.49Whole genome shotgun sequence of line PN40024, sca... [more]
B9SF39|B9SF39_RICCO7.079e-3577.17Mitochondrial import inner membrane translocase su... [more]
B9H8M3|B9H8M3_POPTR1.744e-3372.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LIN4|D7LIN4_ARALY7.581e-2963.04Attim44-2 OS=Arabidopsis lyrata subsp. lyrata GN=A... [more]
Q69V11|Q69V11_ORYSJ2.206e-2863.44Mitochondrial inner membrane translocating protein... [more]
B8B5E7|B8B5E7_ORYSI2.206e-2863.44Putative uncharacterized protein OS=Oryza sativa s... [more]
Q8S8E5|Q8S8E5_ARATH3.762e-2861.96Putative uncharacterized protein At2g36070 OS=Arab... [more]
Q5XF06|Q5XF06_ARATH3.762e-2861.96At2g36070 OS=Arabidopsis thaliana GN=At2g36070 PE=... [more]
D7L3P3|D7L3P3_ARALY6.418e-2864.13Mitochondrial import inner membrane translocase su... [more]
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BLAST of CV090515 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010283350016.218e-3878.49assembled CDS[more]
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BLAST of CV090515 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G36070.12.383e-3061.96| Symbols: ATTIM44-2, TIM44-2 | translocase inner ... [more]
AT2G20510.11.183e-2963.44| Symbols: ATTIM44-1, TIM44-1 | translocase inner ... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 23..34
score
NoneNo IPR availablePANTHERPTHR10721MITOCHONDRIAL INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44coord: 38..129
score: 8.6
NoneNo IPR availablePANTHERPTHR10721:SF1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44coord: 38..129
score: 8.6
NoneNo IPR availableSUPERFAMILY54427NTF2-likecoord: 40..128
score: 9.3
IPR007379Membrane transporter, Tim44-related/Ribosomal protein L45PFAMPF04280Tim44coord: 40..122
score: 3.9

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090515 ID=CV090515; Name=CV090515; organism=Vaccinium corymbosum; type=EST; length=830bp
GTTGATATCTTTCAAACTGTTTGCTTATCTAAAACAGAATGTTCTCACAT
GGATCAGAGGGCCTTAATGTTTTCTGCTACAAGTATCTAATTGCGTTGAC
ACAGCTAATTTGCATTGTGCTGGAATGTGCTAGTTGTTTTTTGTTCATAT
TATGAACTAGTTTTCAAGCAATGCACTTTTTGGTATCTACTCCCAGTTTT
ATTTTTGTATTTTTCATCAACTCTTGTTCCATGCTATTCATTTCCTCTTG
ACAACCATGAATTGCGGTCTTCTCTTATAGATGCATATTACGCATTCATG
GCCATGTCTCTGTCACCATGTGGGCTGTGACTGGTCATTTGAAAAGACCC
TTTGATATGGTTGACGTTTAGAATTCTCTTGTGGCTGAAAGAAAGATAAA
GGTGCTAAAATTCATTTTAGAGAATCTTCTTTTGAAGTATTATGCAAAAC
ACGGGAAAGCATATCTTTTTTTCAATGCCCCTGGGTTTCTTCATCTCTCT
TCTCGATGCAGATTCTACATATATCTGATGTTGAAGTTAGGGAGACCAAG
ATGATGGGGGACAGTCCCATCATCATTCTGGCGTTCCAAACACAGCAGGT
CCATTGCGTACGTGATAGACATGGTACCATAACAGAAGGGGGCAAGGATA
CGATCCACACTGTATACTATGCCTGGGCTATGCAACTAGTAGATGCCGAA
AAACTCGGAGAAGGCGCTCTCTTCCCCATATGGAGGCTGAGAGAAATGCA
ACAAATGGGCATGCNAACCCTTATTNANTTTGAGATCTTTTATCATCTTA
TCAATAGATGTTACATGAGTATTCTCTGGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005744TIM23 mitochondrial import inner membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0015450protein-transporting ATPase activity
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR007379Tim44-like_dom