CV090894

EST Overview
NameCV090894
Unique NameCV090894
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length616
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV090894 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s08680.1 ()

HSP 1 Score: 141.354 bits (355), Expect = 4.292e-34
Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 3
Query:  195 QSKRIMAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            ++KRIM G LF IHR E SQQQS   PPLD +RA  S+Q+VRALN QFASWVQTQL+ HPDELWEDG+ DYLAHASNIMEKFSDVV WLK
Sbjct:   22 RNKRIMEGSLFDIHRPEQSQQQSTPLPPLDAKRAASSQQYVRALNNQFASWVQTQLKNHPDELWEDGIRDYLAHASNIMEKFSDVVNWLK 111          
BLAST of CV090894 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s12090.1 ()

HSP 1 Score: 140.969 bits (354), Expect = 5.606e-34
Identity = 67/90 (74.44%), Postives = 77/90 (85.56%), Query Frame = 3
Query:  195 QSKRIMAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            ++KRIMAG LF +HR EPSQQQ  + PPLD++RA+ S+ HVRALN QFASWVQTQL+ HPDELWEDG+ DYLAHASNIME FSDVV WLK
Sbjct:   22 RNKRIMAGLLFDVHRPEPSQQQ--LTPPLDVKRAESSQHHVRALNNQFASWVQTQLKNHPDELWEDGIQDYLAHASNIMEMFSDVVNWLK 109          
BLAST of CV090894 vs. P. persica 1.0 peptide
Match: ppa005012m ()

HSP 1 Score: 129.798 bits (325), Expect = 9.148e-31
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 3
Query:  210 MAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            MAG     +RAEPSQ+QS+  P L+  RA  SRQHVRALN QFASWVQ+QL+ HPDELWEDGL DYLAHASNIMEKFSDVV WLK
Sbjct:    1 MAGSSCDANRAEPSQEQSIDTPVLNAHRAASSRQHVRALNTQFASWVQSQLKNHPDELWEDGLRDYLAHASNIMEKFSDVVNWLK 85          
BLAST of CV090894 vs. TrEMBL
Match: D7TW79|D7TW79_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019866001 PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.236e-35
Identity = 72/90 (80.00%), Postives = 76/90 (84.44%), Query Frame = 3
Query:  195 QSKRIMAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            QSKRIMAG  F  HRAEPSQQ  M  PPLD+RRA+ SRQHVRALN QFASWVQTQLQ HPDELWEDG+ DYL HASNIMEKFSDVV W+K
Sbjct:   87 QSKRIMAGSPFDFHRAEPSQQPVMTTPPLDVRRAESSRQHVRALNTQFASWVQTQLQNHPDELWEDGVQDYLTHASNIMEKFSDVVNWIK 176          
BLAST of CV090894 vs. TrEMBL
Match: A5CBN4|A5CBN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022123 PE=4 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.110e-34
Identity = 71/90 (78.89%), Postives = 75/90 (83.33%), Query Frame = 3
Query:  195 QSKRIMAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            QSKRIMAG  F  HRAEPSQQ  M  PPLD+ RA+ SRQHVRALN QFASWVQTQLQ HPDELWEDG+ DYL HASNIMEKFSDVV W+K
Sbjct:   22 QSKRIMAGSPFDFHRAEPSQQPVMTTPPLDVXRAESSRQHVRALNTQFASWVQTQLQNHPDELWEDGVQDYLTHASNIMEKFSDVVNWIK 111          
BLAST of CV090894 vs. TrEMBL
Match: C6TGJ7|C6TGJ7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.218e-34
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 3
Query:  192 FQSKRIMAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            F++K+IM G LF +HRAEPSQQ  +  PPLDM+RA+ SRQHVRALN QFASWVQTQL+ HPDELWEDG+ DYL HAS+IMEKFSDVV WLK
Sbjct:   22 FRNKKIMEGSLFDVHRAEPSQQPIVAAPPLDMKRAESSRQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLK 112          
BLAST of CV090894 vs. TrEMBL
Match: B9GKP7|B9GKP7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_751389 PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.695e-30
Identity = 65/85 (76.47%), Postives = 70/85 (82.35%), Query Frame = 3
Query:  210 MAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            M G LF IHR E SQQQS   PPLD +RA  S+Q+VRALN QFASWVQTQL+ HPDELWEDG+ DYLAHASNIMEKFSDVV WLK
Sbjct:    1 MEGSLFDIHRPEQSQQQSTPLPPLDAKRAASSQQYVRALNNQFASWVQTQLKNHPDELWEDGIRDYLAHASNIMEKFSDVVNWLK 85          
BLAST of CV090894 vs. TrEMBL
Match: B9GW57|B9GW57_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_757445 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.825e-30
Identity = 64/85 (75.29%), Postives = 72/85 (84.71%), Query Frame = 3
Query:  210 MAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            MAG LF +HR EPSQQQ  + PPLD++RA+ S+ HVRALN QFASWVQTQL+ HPDELWEDG+ DYLAHASNIME FSDVV WLK
Sbjct:    1 MAGLLFDVHRPEPSQQQ--LTPPLDVKRAESSQHHVRALNNQFASWVQTQLKNHPDELWEDGIQDYLAHASNIMEMFSDVVNWLK 83          
BLAST of CV090894 vs. TrEMBL
Match: C0PEW9|C0PEW9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.823e-27
Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 3
Query:  198 SKRIMAGPLFGIHRAEPSQQQSMV-PPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            SKR+M GP F +HRAE S Q  M  P  LD RRA+ + +HVRALN QFASWVQ QLQ HP ELWEDGL DY++HAS IMEKF DVV WL+
Sbjct:   21 SKRVMDGPSFDVHRAESSHQHVMAGPASLDPRRAEAASKHVRALNTQFASWVQLQLQNHPAELWEDGLKDYISHASEIMEKFKDVVNWLR 110          
BLAST of CV090894 vs. TrEMBL
Match: B8AP25|B8AP25_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12927 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.823e-27
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 3
Query:  198 SKRIMAGPLFGIHRAEPSQQQSMV-PPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            SKR+M  P FG+HRAE S Q  M  P  LD +RA+ + +HVRALN+QFASWVQ+QLQ HP ELWEDG+ DY++HAS IMEKF DVV W+K
Sbjct:   36 SKRVMDRPSFGVHRAESSHQHMMAGPATLDPQRAEAANKHVRALNSQFASWVQSQLQNHPAELWEDGMRDYISHASEIMEKFKDVVNWIK 125          
BLAST of CV090894 vs. TrEMBL
Match: Q60DL9|Q60DL9_ORYSJ (RanBP1 domain containing protein OS=Oryza sativa subsp. japonica GN=OSJNBb0036M02.12 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.994e-27
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 3
Query:  186 IQFQSKRIMAGPLFGIHRAEPSQQQSMV-PPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            +   SKR+M  P FG+HRAE S Q  M  P  LD +RA+ + +HVRALN+QFASWVQ+QLQ HP ELWEDG+ DY++HAS IMEKF DVV W++
Sbjct:   93 VSLPSKRVMDRPSFGVHRAESSHQHMMAGPATLDPQRAEAANKHVRALNSQFASWVQSQLQNHPAELWEDGMRDYISHASEIMEKFKDVVNWIR 186          
BLAST of CV090894 vs. TrEMBL
Match: Q75HB3|Q75HB3_ORYSJ (Expressed protein, 5'-partial (Fragment) OS=Oryza sativa subsp. japonica GN=OSJNBa0056E06.1 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.518e-27
Identity = 57/90 (63.33%), Postives = 70/90 (77.78%), Query Frame = 3
Query:  198 SKRIMAGPLFGIHRAEPSQQQSMV-PPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            SKR+M  P FG+HRAE S Q  M  P  LD +RA+ + +HVRALN+QFASWVQ+QLQ HP ELWEDG+ DY++HAS IMEKF DVV W++
Sbjct:   87 SKRVMDRPSFGVHRAESSHQHMMAGPATLDPQRAEAANKHVRALNSQFASWVQSQLQNHPAELWEDGMRDYISHASEIMEKFKDVVNWIR 176          
BLAST of CV090894 vs. TrEMBL
Match: Q10FH5|Q10FH5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g46480 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.972e-25
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 3
Query:  210 MAGPLFGIHRAEPSQQQSMV-PPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            M  P FG+HRAE S Q  M  P  LD +RA+ + +HVRALN+QFASWVQ+QLQ HP ELWEDG+ DY++HAS IMEKF DVV W++
Sbjct:    1 MDRPSFGVHRAESSHQHMMAGPATLDPQRAEAANKHVRALNSQFASWVQSQLQNHPAELWEDGMRDYISHASEIMEKFKDVVNWIR 86          
BLAST of CV090894 vs. Vitis vinifera peptide
Match: GSVIVT01019866001 (assembled CDS)

HSP 1 Score: 152.525 bits (384), Expect = 1.128e-37
Identity = 72/90 (80.00%), Postives = 76/90 (84.44%), Query Frame = 3
Query:  195 QSKRIMAGPLFGIHRAEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            QSKRIMAG  F  HRAEPSQQ  M  PPLD+RRA+ SRQHVRALN QFASWVQTQLQ HPDELWEDG+ DYL HASNIMEKFSDVV W+K
Sbjct:   87 QSKRIMAGSPFDFHRAEPSQQPVMTTPPLDVRRAESSRQHVRALNTQFASWVQTQLQNHPDELWEDGVQDYLTHASNIMEKFSDVVNWIK 176          
BLAST of CV090894 vs. TAIR peptide
Match: AT4G11790.1 (| Symbols: | Pleckstrin homology (PH) domain superfamily protein | chr4:7090456-7093208 FORWARD LENGTH=443)

HSP 1 Score: 114.005 bits (284), Expect = 6.383e-26
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 3
Query:  192 FQSKRIMAGPLFGIHR-AEPSQQQSMVPPPLDMRRAQLSRQHVRALNAQFASWVQTQLQTHPDELWEDGLHDYLAHASNIMEKFSDVVRWLK 464
            F++ + + G  FG  +   P QQ S+    LD +RA+L+R+HVRALN QF SWVQ QL+ HPDELWEDG++DY+ HASNI+EKF DVV WLK
Sbjct:   17 FKNAKPVEGIFFGTQKNVVPMQQSSVTSASLDKQRAELARKHVRALNNQFVSWVQLQLKNHPDELWEDGMNDYITHASNILEKFKDVVSWLK 108          
The following BLAST results are available for this feature:
BLAST of CV090894 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
POPTR_0001s08680.14.292e-3475.56[more]
POPTR_0003s12090.15.606e-3474.44[more]
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BLAST of CV090894 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa005012m9.148e-3174.12[more]
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BLAST of CV090894 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7TW79|D7TW79_VITVI2.236e-3580.00Whole genome shotgun sequence of line PN40024, sca... [more]
A5CBN4|A5CBN4_VITVI1.110e-3478.89Putative uncharacterized protein OS=Vitis vinifera... [more]
C6TGJ7|C6TGJ7_SOYBN4.218e-3474.73Putative uncharacterized protein OS=Glycine max PE... [more]
B9GKP7|B9GKP7_POPTR3.695e-3076.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GW57|B9GW57_POPTR4.825e-3075.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C0PEW9|C0PEW9_MAIZE3.823e-2766.67Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B8AP25|B8AP25_ORYSI3.823e-2764.44Putative uncharacterized protein OS=Oryza sativa s... [more]
Q60DL9|Q60DL9_ORYSJ4.994e-2760.64RanBP1 domain containing protein OS=Oryza sativa s... [more]
Q75HB3|Q75HB3_ORYSJ8.518e-2763.33Expressed protein, 5'-partial (Fragment) OS=Oryza ... [more]
Q10FH5|Q10FH5_ORYSJ7.972e-2562.79Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of CV090894 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010198660011.128e-3780.00assembled CDS[more]
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BLAST of CV090894 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G11790.16.383e-2657.61| Symbols: | Pleckstrin homology (PH) domain supe... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13118NUCLEOPORIN 50coord: 53..124
score: 0
NoneNo IPR availableSEGsegsegcoord: 111..125
score
NoneNo IPR availableSEGsegsegcoord: 33..47
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV090894 ID=CV090894; Name=CV090894; organism=Vaccinium corymbosum; type=EST; length=616bp
CACGGAGAGGAACGGCGATTCGTAGGGGGTTGAGAGAGTACGAAGATCTG
CGAAGAAGACAGGTGGTGATTCGTCTCTCGATCGAATTTTTAAGCCTCGA
TTCAAGCATTCAGCAGCATCTTCAGCTATCATAATCTTCAATCGAATCCC
ATTTTTGCAGACCCATCTTCTATCTAGAACCATCGATTCAGTTCCAGAGT
AAAAGAATAATGGCAGGACCTCTTTTTGGCATTCATAGGGCAGAGCCATC
TCAGCAGCAATCAATGGTGCCACCACCATTGGATATGCGCCGAGCTCAAT
TATCTCGACAGCATGTGAGAGCTCTCAATGCCCAATTTGCAAGTTGGGTC
CAAACACAACTACAGACTCACCCGGATGAACTATGGGAAGATGGACTCCA
TGACTATCTGGCTCATGCTTCAAACATAATGGAGAAATTTAGCGATGTCG
TTCGTTGGCTGAAAGCAAATGCCTCTAGTAATGGAGCAGATGCTTCTAGT
AATGGAGGTTGTTTCTCTGCATTGGAATCTCATGCTGCTCCAAATAACCC
TTGCACCTGAAAAGTAAGGAAAACCGATGAAATCATTTCNAAAGGNAACT
GACGTAGCTCGGGCTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated