DW043133

EST Overview
NameDW043133
Unique NameDW043133
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length533
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide2011-01-25
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of DW043133 vs. Vitis vinifera peptide
Match: GSVIVT01018044001 (assembled CDS)

HSP 1 Score: 42.743 bits (99), Expect = 7.351e-8
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = -3 
Query:  220 WYG--VYSLISNGGIPWFFG*LPCVLSVASLIPLF 318
            W G  V++ ISNGGIPWF G    VLS+ASLIPLF
Sbjct:  108 WKGEDVFAQISNGGIPWFLG-TAVVLSLASLIPLF 141

HSP 2 Score: 30.0314 bits (66), Expect = 7.351e-8
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = -1 
Query:  111 DMWYG*FAMVGLFALAFT 164
            +MW G FAM+GL ALAFT
Sbjct:  159 EMWNGRFAMLGLVALAFT 176
The following BLAST results are available for this feature:
BLAST of DW043133 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010180440017.351e-865.71assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..10
score
NoneNo IPR availableSEGsegsegcoord: 6..24
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043133 ID=DW043133; Name=DW043133; organism=Vaccinium corymbosum; type=EST; length=533bp
AAGCGTGGTCGCGGCCGAGGTACAACAACAATAGTAACACACATACAAGA
TAAATCCCTAATAAACATACAGAGTGGACCTACACAAGGGCCCCACCTAA
AGCAAACTCAGGTGAAGGCCAGTGCAAATAAACCCACCATAGCAAATCAA
CCATACCACATATCAAGCATCAGCACTAAAGAACTCTATAGACTAAGACT
CACACACTCAACTCACATAGAATAGAGGAATCAAAGATGCTACGGAAAGC
ACACACGGAAGTCAGCCAAAAAACCACGGGATCCCACCGTTGGATATCAA
TGAGTAAACACCATACCACTGAACCAATTAGTTATTAAGGTTTCCCACCG
GGGCTTAATTTAGGGCCTGGGCACAACAAAAAAGGCCCCAAAATTTAAAT
TTCCGCCCGGAAGGTTTCTTGGGCCCGGTTTTGGAAATTTCATAACTCCA
CGGGGTGGGCCTGGGGCCCCCACCTTAACATTTGCCGAAACCCACCTTTT
GGGACCGAAACNTGGTGGCTGGNTTGGGGAATT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated