DW043160
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043160 vs. DB:swissprot:display
Match: LEAD3_DAUCA (Late embryogenesis abundant protein Dc3 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.883e-7 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 2 Query: 29 MAS-EDQKYQAGETMGKAQEKTGQMTDNMKQKAQEAKDHALPRQAQGREKNKNHRRFQGN--QNRAGXI 226 MAS +DQ Y+AGE G AQEKTGQM D MK KAQ AKD A R++ + G+ ++AG + Sbjct: 1 MASHQDQSYKAGEPKGHAQEKTGQMADTMKDKAQAAKDKASEMAGSARDRTVESKDQTGSYVSDKAGAV 69
BLAST of DW043160 vs. DB:swissprot:display
Match: LEA1_CICAR (Late embryogenesis abundant protein 1 OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.883e-7 Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 2 Query: 29 MASEDQKYQAGETMGKAQEKTGQMTDNMKQKAQEAKDHALPRQAQGREKNKNHRRFQGNQNRAGXI*PRKKGTKAGQTTSSQNNRVAPKGQGLWQGRSRLTQGT 340 MAS DQ Y+AGETMG+ +EKT QM N++ KAQ AK+ A +QA K+K + Q + + K K QT + + Q + T+ T Sbjct: 1 MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKA--QQAAQTAKDKTSQTAQAAKEKTQQTAQAAK-EKTQQTAQAAKDETQQTAQAAKDKTQQTTEAT 101
BLAST of DW043160 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s17310.1 () HSP 1 Score: 54.299 bits (129), Expect = 6.517e-8 Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 29 MASEDQKYQAGETMGKAQEKTGQMTDNMKQKAQEAKDHALPRQAQGREK 175 MAS +Q Y+AGE+ G+A+EKTG++T ++K+KA+E KD Q +EK Sbjct: 1 MASHEQSYRAGESHGRAEEKTGRVTGSIKEKAREVKDKTYETAQQAKEK 49
BLAST of DW043160 vs. TrEMBL
Match: Q2QKE8|Q2QKE8_CATRO (Late embryogenesis abundant protein OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.937e-9 Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 2 Query: 29 MASEDQKYQAGETMGKAQEKTGQMTDNMKQKAQEAKDHA--LPRQAQGREKNKNHRRFQGNQNRAGXI*PRKKGTKAGQTTSSQNNRVAPKGQGLWQGRSRLTQ-GTPPQGPGKNKT 370 MAS +Q Y+AGE G+AQEKTGQM ++K+K Q+AKD A + AQGR + K + ++AG K +TT S R + + Q S + Q G GK KT Sbjct: 1 MASHEQSYKAGEAKGQAQEKTGQMMGDVKEKTQQAKDKASETAQSAQGRAQEKKDQTGSYVSDKAG-----AAKDKLSETTQSAKERASGAAEATKQKASEMAQSGKETAEAGKEKT 112
BLAST of DW043160 vs. TAIR peptide
Match: AT3G15670.1 (| Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr3:5310141-5310901 REVERSE LENGTH=225) HSP 1 Score: 54.299 bits (129), Expect = 5.743e-8 Identity = 35/102 (34.31%), Postives = 47/102 (46.08%), Query Frame = 2 Query: 29 MASEDQKYQAGETMGKAQEKTGQMTDNMKQKAQEAKDHALPRQAQGREKNKNHRRFQGNQNRAGXI*PRKKGTKAGQTTSSQNNRVAPKGQGLWQGRSRLTQ 334 MAS Q Y+AGET GKAQEKTGQ M+ KA+E +D Q + K H Q +++ + KA +T S + + Q Q TQ Sbjct: 1 MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKT--SQTAQTAQQKAHETAQSAKDKTSQT-AQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQ 99 The following BLAST results are available for this feature:
BLAST of DW043160 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 2
BLAST of DW043160 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of DW043160 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 1
BLAST of DW043160 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043160 ID=DW043160; Name=DW043160; organism=Vaccinium corymbosum; type=EST; length=597bpback to top |