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EST Overview
Name | HO054793 |
Unique Name | HO054793 |
Type | EST |
Organism | Vaccinium corymbosum (northern highbush blueberry) |
Sequence length | 298 |
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR005326 | Plectin/S10, N-terminal | PFAM | PF03501 | S10_plectin | coord: 1..27 score: 5.7 |
None | No IPR available | PANTHER | PTHR12146 | 40S RIBOSOMAL PROTEIN S10 | coord: 1..65 score: 9.6 |
None | No IPR available | SEG | seg | seg | coord: 25..48 score |
None | No IPR available | SEG | seg | seg | coord: 15..36 score |
Properties
Property Name | Value |
Singlet in analysis | Vaccinium corymbosum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >HO054793 ID=HO054793; Name=HO054793; organism=Vaccinium corymbosum; type=EST; length=298bp GACACATGATGGCGTTGGATTTCTGAGGACTTACCTCTCCTTGCCGTCTG AGATCGTTCCCAACCCCCTGAAAAGGATAGCTCGCCCAATACCTGCTGCG GGTCGGCCTGGTGGACCCCCTGGTGATCCCCCACGTGGTCCTCCTACATT TTTAGGAAATAGGCCAAGGTATAACAAACGTGATCGTCAAGGCTACCGCG TATATCAAGCATGTCTTTCTGGCCAATAGGCGCAGACAATGGATGTGCCC CTGCTGAAATCAACGGCGTTTGAGCTTCTGTCCGACCGGCTGCTTTGG back to top
Annotated Terms
The
following terms have been associated with
this EST:
Vocabulary: INTERPRO
Term | Definition |
IPR005326 | Plectin_eS10_N |
noIPR | unintegrated |
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