CF810422 | GDV

EST Overview


Name	CF810422
Unique Name	CF810422
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	628

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0016s02130.1 ()

HSP 1 Score: 207.608 bits (527), Expect = 4.995e-54
Identity = 116/206 (56.31%), Postives = 136/206 (66.02%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MTA+EIE+IL+MQHAATH NDPY+DDYYHQA LAK++  S +K+ FCP + K                 H DALG +    IRRP PLLEVDPP S  GN +EQ+SE+PLE+EPMLAARITIE                Q +QPQDGGA LRR+R  LLEGLA SLQLVDPLG++G   GL  KDDI  L +    KG K
Sbjct:  364 QFRSKHMTADEIESILKMQHAATHSNDPYIDDYYHQASLAKRSTGSRTKNNFCPSHLK-ELPSRSRNSADQHSHLHFDALGKMPLPSIRRPHPLLEVDPPGSGDGN-SEQMSERPLEQEPMLAARITIEDSLSLLLDVDDIDRFLQCNQPQDGGAQLRRRRQNLLEGLAASLQLVDPLGQTGKTAGLASKDDIVFLRLVSLPKGRK 567

[Close]

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0006s02270.1 ()

HSP 1 Score: 204.912 bits (520), Expect = 3.237e-53
Identity = 116/206 (56.31%), Postives = 134/206 (65.05%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MTA+EIE+IL+MQHAATH  DPY+DDYYHQA +AKK+  S  KH FCP + K                 H DALG I    IR+PRPLLEVD PSS  GN +EQ+SE+PLE+EPMLAARITIE                Q +Q QDGGA LRR+R  LLEGLA SLQLVDPLG++G   GL  KDDI  L +    KG K
Sbjct:  365 QFRSKHMTADEIESILKMQHAATHSTDPYIDDYYHQASIAKKSTGSRIKHNFCPSHMK-ELPSRSRNSADQHSHLHFDALGKIPLPPIRKPRPLLEVDSPSSGDGN-SEQISERPLEQEPMLAARITIEDSLSLLLDVDDIDRFLQCNQSQDGGAQLRRRRQNLLEGLAASLQLVDPLGQTGQSVGLASKDDIVFLRLVSLPKGQK 568

[Close]

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s46190.1 ()

HSP 1 Score: 203.756 bits (517), Expect = 7.212e-53
Identity = 114/207 (55.07%), Postives = 134/207 (64.73%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVS-EKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MT +EIE ILRMQ AATH NDPYVDDYYHQA L+KK A +  +H FCP++ +                  VDALG I FS IRRPRPLLEV+PP+S  G  TEQ S EKPLE+EPMLAAR+TIE                +F+Q  +GG  LRR+R  LLEGLA S+QLVDPLGK+G+  GL PKDD   L +    KG K
Sbjct:  388 QFRSKHMTTDEIETILRMQLAATHSNDPYVDDYYHQACLSKKTARAKLRHHFCPIHLR-DLPPRARANAEPHAFLQVDALGRIPFSSIRRPRPLLEVEPPNSTGGGNTEQNSAEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLEFNQFHEGGTQLRRRRQALLEGLAASMQLVDPLGKNGHTVGLAPKDDFVFLRLVSLPKGQK 593

[Close]

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s14710.1 ()

HSP 1 Score: 201.83 bits (512), Expect = 2.741e-52
Identity = 116/208 (55.77%), Postives = 134/208 (64.42%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVS-EKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANL-RRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MT +EIE ILRMQ AATH NDPYVDDYYHQA L+KK A +  KH FCP + +                  VDALG I FS IRRPRPLLEV+PP+S+ G   EQ S EKPLE+EPMLAAR+TIE                +F+Q  DGGA L R +R +LLEGLA S+QLVDPLGK+GN  GL PKDD   L +    KG K
Sbjct:  323 QFRSKHMTTDEIETILRMQLAATHSNDPYVDDYYHQACLSKKTAGAKLKHHFCPTHLR-DLPPRARANSEPHAFLQVDALGRIPFSSIRRPRPLLEVEPPNSSVGGNAEQNSVEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLEFNQFHDGGAQLMRHRRQVLLEGLAASMQLVDPLGKNGNTVGLAPKDDFVFLRLVSLPKGRK 529

[Close]

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0098s00230.1 ()

HSP 1 Score: 191.045 bits (484), Expect = 4.838e-49
Identity = 109/203 (53.69%), Postives = 129/203 (63.55%), Query Frame = 3

Query:   12 SKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            S+   A+EIE+IL+MQHAATH NDPY+DDYYHQA LAK++  S +K+ FCP + K                 H DALG +    IR P PLLEVDPP S  GN +EQ+SE+PLE+EPMLAARITIE                Q +QPQDGGA LRR+R  LLEGLA SLQLVDPLG++G   GL  KDDI  L +    KG K
Sbjct:  234 SQKSDADEIESILKMQHAATHSNDPYIDDYYHQASLAKRSTGSRNKNNFCPSHLK-ELPSRSRNSADQHSHLHFDALGKMPLLSIRSPHPLLEVDPPGSGDGN-SEQMSERPLEQEPMLAARITIEDSLSLLLDVDDIDRFLQCNQPQDGGAQLRRRRQNLLEGLAASLQLVDPLGQTGKTAGLASKDDIVFLRLVSLPKGRK 434

[Close]

BLAST of CF810422 vs. P. persica 1.0 peptide
Match: ppa001180m ()

HSP 1 Score: 211.46 bits (537), Expect = 2.478e-55
Identity = 120/206 (58.25%), Postives = 137/206 (66.50%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MT+EEIE+IL+MQHAATH NDPY+DDYYHQA L+KK+A S SKH FCP + +                  VDALG I  S IRRPRPLLEVDPPS + G+G EQ SEKPLE+EPMLAARI +E                Q  QPQDGG  LRR+R ILLEGLA+SLQLVDPLGK     GL PKDD+  L +    KG K
Sbjct:  463 QFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQASLSKKSAGSRSKHPFCPSHLR-EFPSRGRNSSDQHTHSSVDALGRIPLSSIRRPRPLLEVDPPSGS-GDG-EQASEKPLEQEPMLAARIAVEDGLCLLLDVDDIDRLIQHGQPQDGGVQLRRRRQILLEGLASSLQLVDPLGKGTQAVGLAPKDDLVFLRLVSLPKGRK 665

[Close]

BLAST of CF810422 vs. P. persica 1.0 peptide
Match: ppa002090m ()

HSP 1 Score: 208.764 bits (530), Expect = 1.606e-54
Identity = 119/207 (57.49%), Postives = 138/207 (66.67%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPP-SSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSKYMTA+EIE+ILRMQ AATH NDPYVDDYYHQ  LA+K+A S  KH FCP N +                  VDALG + FS IRRPRPLLEV+PP SS+ GN  ++VSEKPLE+EPMLAAR+TIE                QF+Q QDGG  L+R+R  LLEGLATSLQLVDPLG +G+  G  PKDD+  L +    KG K
Sbjct:  291 QFRSKYMTADEIESILRMQLAATHSNDPYVDDYYHQYCLARKSAGSKLKHHFCPTNLR-DLPPRARANTEPHAFLQVDALGRVPFSSIRRPRPLLEVEPPNSSSPGNTEQKVSEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLQFNQLQDGGIQLKRRRQALLEGLATSLQLVDPLGNNGHTVGPVPKDDLVFLRLVSLPKGRK 496

[Close]

BLAST of CF810422 vs. TrEMBL
Match: A5C725|A5C725_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033604 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.435e-55
Identity = 127/211 (60.19%), Postives = 141/211 (66.82%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNG-TEQ-VSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPKAPF 626
            QFRSKYMTA+EIE+ILRMQHAATH NDPY+DDYYHQARLAKK+AES  KH F P + K                  VDALG I+FS IRRPRPLLEV+ PSS   +G TEQ V+ KPLE+EPMLAARI IE                QFS PQDGG  LRRKR +LLEGLA SLQLVDPLGKSG+  GL P DD+  L +    KG K  F
Sbjct:  441 QFRSKYMTADEIESILRMQHAATHSNDPYIDDYYHQARLAKKSAESRLKHHFYPSHLKDLPTRGRNNTEQHSHLP-VDALGRIAFSSIRRPRPLLEVBSPSSGSNDGSTEQNVTVKPLEQEPMLAARIAIEDGLCLLLDVDDIDRVLQFSPPQDGGIQLRRKRQMLLEGLAASLQLVDPLGKSGHAVGLAPNDDLVFLRLVSLPKGRKLLF 650

[Close]

BLAST of CF810422 vs. TrEMBL
Match: B9RI49|B9RI49_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1576440 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.215e-53
Identity = 117/207 (56.52%), Postives = 140/207 (67.63%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQ-VSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MTA+EIE+ILRMQ AA H NDPYVDDYYHQA LAKK+  +  KH FCP + +                  VDALG  +FS IRRPRPLLEVDPP+S+   GT+Q VSEKPLE+EPMLAAR+ IE                +F+Q QDGGA LRR+R +L+EGLATS+QLVDPLGK+G+  GL PKDD+  L +    KG K
Sbjct:  399 QFRSKHMTADEIESILRMQLAAMHSNDPYVDDYYHQACLAKKSVGAKLKHHFCPTHLR-DLPPRARANAEPHAFLQVDALGRAAFSSIRRPRPLLEVDPPNSSVSGGTDQKVSEKPLEQEPMLAARVAIEDGLCLLLDVDDIDRFLEFNQFQDGGAQLRRRRQVLMEGLATSMQLVDPLGKNGHTVGLAPKDDLVFLRLVSLPKGRK 604

[Close]

BLAST of CF810422 vs. TrEMBL
Match: B9S3M6|B9S3M6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0673440 PE=4 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.351e-51
Identity = 113/206 (54.85%), Postives = 134/206 (65.05%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSKYM AEEIE+IL+MQHAATHGNDPY+DDYYHQA LAK++  S  K  FCP + K                 HV+ALG    + IR P+PLL+VDPP       +EQ+SE+PLE+EPMLAARI +E                QF+QPQDGGA+LRRKR  +LEGLA SLQLVDPLG+SGN  G+  KDD+  L I    KG K
Sbjct:  314 QFRSKYMIAEEIESILKMQHAATHGNDPYIDDYYHQASLAKRSDGSRVKKPFCPSHMK-EPPSRSRNSTDQQSHLHVNALGKTPLTSIRIPQPLLDVDPPPGYGDGNSEQISERPLEQEPMLAARIAVEDGLWLLLEVDDIDRFLQFNQPQDGGAHLRRKRQTMLEGLAASLQLVDPLGQSGNTAGMSSKDDLVFLRIVSLPKGRK 518

[Close]

BLAST of CF810422 vs. TrEMBL
Match: B9HD71|B9HD71_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560243 PE=4 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.304e-51
Identity = 117/206 (56.80%), Postives = 134/206 (65.05%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MTA+EIE+IL+MQHAATH  DPY+DDYYHQA LAKK+  S  KH FCP + K                 H DALG I    IR+PRPLLEVD PSS  GN +EQ+SE+PLE+EPMLAARITIE                Q +Q QDGGA LRR+R  LLEGLA SLQLVDPLG++G   GL  KDDI  L +    KG K
Sbjct:  365 QFRSKHMTADEIESILKMQHAATHSTDPYIDDYYHQASLAKKSTGSRIKHNFCPSHMK-ELPSRSRNSADQHSHLHFDALGKIPLPPIRKPRPLLEVDSPSSGDGN-SEQISERPLEQEPMLAARITIEDSLSLLLDVDDIDRFLQCNQSQDGGAQLRRRRQNLLEGLAASLQLVDPLGQTGQSVGLASKDDIVFLRLVSLPKGQK 568

[Close]

BLAST of CF810422 vs. TrEMBL
Match: B9GJZ7|B9GJZ7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550538 PE=4 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.756e-51
Identity = 114/207 (55.07%), Postives = 134/207 (64.73%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVS-EKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MT +EIE ILRMQ AATH NDPYVDDYYHQA L+KK A +  +H FCP++ +                  VDALG I FS IRRPRPLLEV+PP+S  G  TEQ S EKPLE+EPMLAAR+TIE                +F+Q  +GG  LRR+R  LLEGLA S+QLVDPLGK+G+  GL PKDD   L +    KG K
Sbjct:  386 QFRSKHMTTDEIETILRMQLAATHSNDPYVDDYYHQACLSKKTARAKLRHHFCPIHLR-DLPPRARANAEPHAFLQVDALGRIPFSSIRRPRPLLEVEPPNSTGGGNTEQNSAEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLEFNQFHEGGTQLRRRRQALLEGLAASMQLVDPLGKNGHTVGLAPKDDFVFLRLVSLPKGQK 591

[Close]

BLAST of CF810422 vs. TrEMBL
Match: B9I0J7|B9I0J7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1094681 PE=4 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.327e-50
Identity = 116/208 (55.77%), Postives = 134/208 (64.42%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVS-EKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANL-RRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MT +EIE ILRMQ AATH NDPYVDDYYHQA L+KK A +  KH FCP + +                  VDALG I FS IRRPRPLLEV+PP+S+ G   EQ S EKPLE+EPMLAAR+TIE                +F+Q  DGGA L R +R +LLEGLA S+QLVDPLGK+GN  GL PKDD   L +    KG K
Sbjct:  391 QFRSKHMTTDEIETILRMQLAATHSNDPYVDDYYHQACLSKKTAGAKLKHHFCPTHLR-DLPPRARANSEPHAFLQVDALGRIPFSSIRRPRPLLEVEPPNSSVGGNAEQNSVEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLEFNQFHDGGAQLMRHRRQVLLEGLAASMQLVDPLGKNGNTVGLAPKDDFVFLRLVSLPKGRK 597

[Close]

BLAST of CF810422 vs. TrEMBL
Match: D7KEH3|D7KEH3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889054 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.546e-47
Identity = 113/206 (54.85%), Postives = 131/206 (63.59%), Query Frame = 3

Query:    6 FRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSA-FGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            FRSKYMTA EIENILRMQ  ATH NDPYVDDYYHQARLAKK+A +  KH FCP N                    VDALG + FS IRRPRPLLE+DPP+S   GN  ++ ++KPLE+EPMLAAR+ IE                +F+Q QDGG  LR+KR  LL+GLA SLQLVDPLGK+G   GL    D+  L I+   KG K
Sbjct:  363 FRSKYMTAVEIENILRMQLVATHSNDPYVDDYYHQARLAKKSAGAKLKHHFCP-NHLRDLPSRARPNNEPHAFLQVDALGRVPFSSIRRPRPLLEMDPPNSTKSGNLEQKDTDKPLEQEPMLAARVIIEEGLYLFLEVDDIDRFLEFNQLQDGGNQLRQKRQALLDGLAVSLQLVDPLGKNGQNSGLA-FQDVVFLRITSLRKGRK 566

[Close]

BLAST of CF810422 vs. TrEMBL
Match: Q5ZAQ3|Q5ZAQ3_ORYSJ (Os01g0769000 protein OS=Oryza sativa subsp. japonica GN=B1143G03.27 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.972e-46
Identity = 110/208 (52.88%), Postives = 131/208 (62.98%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLG--KSGNPDGLGPKDDIGVLTISFSTKGPK 617
            +FRSKYM++EEIE+ILRMQH+A+H +DPYV DYYHQA +AKK A S  K  F P + K                  VDALG +SFS IRRPR LLEVD PSS  G+  ++ S +PLE+EPMLAAR+T+E                Q SQ QD    LRR+R +LLEGLATSLQLVDPLG  KS +  GL PKDD+  L I    KG K
Sbjct:  384 KFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKKGASSRQKANFAPTSMK-DLPSKSRSSSDHHAYLQVDALGRVSFSSIRRPRSLLEVDLPSSGDGSHDQKSSLRPLEKEPMLAARVTVEDAICLLLEVDDIDRLLQSSQAQDNSFQLRRRRQVLLEGLATSLQLVDPLGPSKSSHSSGLAPKDDLVFLRIVSLPKGRK 590

[Close]

BLAST of CF810422 vs. TrEMBL
Match: A2ZY79|A2ZY79_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_03596 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.972e-46
Identity = 110/208 (52.88%), Postives = 131/208 (62.98%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLG--KSGNPDGLGPKDDIGVLTISFSTKGPK 617
            +FRSKYM++EEIE+ILRMQH+A+H +DPYV DYYHQA +AKK A S  K  F P + K                  VDALG +SFS IRRPR LLEVD PSS  G+  ++ S +PLE+EPMLAAR+T+E                Q SQ QD    LRR+R +LLEGLATSLQLVDPLG  KS +  GL PKDD+  L I    KG K
Sbjct:  402 KFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKKGASSRQKANFAPTSMK-DLPSKSRSSSDHHAYLQVDALGRVSFSSIRRPRSLLEVDLPSSGDGSHDQKSSLRPLEKEPMLAARVTVEDAICLLLEVDDIDRLLQSSQAQDNSFQLRRRRQVLLEGLATSLQLVDPLGPSKSSHSSGLAPKDDLVFLRIVSLPKGRK 608

[Close]

BLAST of CF810422 vs. TrEMBL
Match: A2WVH2|A2WVH2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03887 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.972e-46
Identity = 110/208 (52.88%), Postives = 131/208 (62.98%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLG--KSGNPDGLGPKDDIGVLTISFSTKGPK 617
            +FRSKYM++EEIE+ILRMQH+A+H +DPYV DYYHQA +AKK A S  K  F P + K                  VDALG +SFS IRRPR LLEVD PSS  G+  ++ S +PLE+EPMLAAR+T+E                Q SQ QD    LRR+R +LLEGLATSLQLVDPLG  KS +  GL PKDD+  L I    KG K
Sbjct:  402 KFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKKGASSRQKANFAPTSMK-DLPSKSRSSSDHHAYLQVDALGRVSFSSIRRPRSLLEVDLPSSGDGSHDQKSSLRPLEKEPMLAARVTVEDAICLLLEVDDIDRLLQSSQAQDNSFQLRRRRQVLLEGLATSLQLVDPLGLSKSSHSSGLAPKDDLVFLRIVSLPKGRK 608

[Close]

BLAST of CF810422 vs. Vitis vinifera peptide
Match: GSVIVT01015721001 (assembled CDS)

HSP 1 Score: 98.9821 bits (245), Expect = 1.533e-21
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPK 176
            QFRSKYMTA+EIE+ILRMQHAATH NDPY+DDYYHQARLAKK+AES  KH F P + K
Sbjct:  364 QFRSKYMTADEIESILRMQHAATHSNDPYIDDYYHQARLAKKSAESRLKHHFYPSHLK 421

[Close]

BLAST of CF810422 vs. TAIR peptide
Match: AT4G14990.1 (| Symbols: | Topoisomerase II-associated protein PAT1 | chr4:8566259-8569511 REVERSE LENGTH=787)

HSP 1 Score: 181.415 bits (459), Expect = 3.376e-46
Identity = 107/206 (51.94%), Postives = 129/206 (62.62%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSKYMT+EEIE+IL+MQH+ +H +DPYV+DYYHQARLAKK++ S +K +  P + K                 HVDALG I+   I RPR LLEVD P S+          K LE+EP++AAR+TIE                QF++PQDGGA LRRKR ILLEGLATSLQLVDP  K+G   GL  KDDI  L I+   KG K
Sbjct:  373 QFRSKYMTSEEIESILKMQHSNSHSSDPYVNDYYHQARLAKKSSGSRTKPQLYPSHLK-DHQSRSRNSSDQQPQVHVDALGKITLPSICRPRALLEVDSPPSS--------GHKHLEDEPLVAARVTIEDAFGVLIDIVDIDRTLQFNRPQDGGAQLRRKRQILLEGLATSLQLVDPFSKTGQKTGLTTKDDIVFLRITTLPKGRK 569

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BLAST of CF810422 vs. TAIR peptide
Match: AT1G79090.2 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 1260 Blast hits to 1163 proteins in 186 species: Archae - 0; Bacteria - 32; Metazoa - 596; Fungi - 277; Plants - 212; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). | chr1:29749551-29752945 REVERSE LENGTH=793)

HSP 1 Score: 180.259 bits (456), Expect = 7.521e-46
Identity = 106/206 (51.46%), Postives = 126/206 (61.17%), Query Frame = 3

Query:    6 FRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSA-FGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            FRSKYM+A EIENILRMQ  ATH NDPYVDDYYHQA LAKK+A +  KH FCP N                    V+ALG + FS IRRPRPLLEVDPP+SA FGN   + ++KPL++EPMLAAR+ IE                +F+Q QDGG  L+++R  LL+ LA SLQL DPL K+G    L   DD   L +    KG K
Sbjct:  387 FRSKYMSAGEIENILRMQLVATHSNDPYVDDYYHQACLAKKSAGAKLKHHFCP-NHLRDLQQRARSNNEPHAFLQVEALGRVPFSSIRRPRPLLEVDPPNSAKFGNAEHKPTDKPLDQEPMLAARVYIEDGLCLLLEVDDIDRFLEFNQLQDGGHQLKQRRQALLQSLAVSLQLGDPLAKNGQSQSL---DDFLFLRVISLPKGRK 588

[Close]

BLAST of CF810422 vs. TAIR peptide
Match: AT1G79090.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:29749551-29752945 REVERSE LENGTH=793)

HSP 1 Score: 180.259 bits (456), Expect = 7.521e-46
Identity = 106/206 (51.46%), Postives = 126/206 (61.17%), Query Frame = 3

Query:    6 FRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVDPPSSA-FGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            FRSKYM+A EIENILRMQ  ATH NDPYVDDYYHQA LAKK+A +  KH FCP N                    V+ALG + FS IRRPRPLLEVDPP+SA FGN   + ++KPL++EPMLAAR+ IE                +F+Q QDGG  L+++R  LL+ LA SLQL DPL K+G    L   DD   L +    KG K
Sbjct:  387 FRSKYMSAGEIENILRMQLVATHSNDPYVDDYYHQACLAKKSAGAKLKHHFCP-NHLRDLQQRARSNNEPHAFLQVEALGRVPFSSIRRPRPLLEVDPPNSAKFGNAEHKPTDKPLDQEPMLAARVYIEDGLCLLLEVDDIDRFLEFNQLQDGGHQLKQRRQALLQSLAVSLQLGDPLAKNGQSQSL---DDFLFLRVISLPKGRK 588

[Close]

BLAST of CF810422 vs. TAIR peptide
Match: AT3G22270.1 (| Symbols: | Topoisomerase II-associated protein PAT1 | chr3:7874480-7877857 FORWARD LENGTH=782)

HSP 1 Score: 177.178 bits (448), Expect = 6.367e-45
Identity = 103/207 (49.76%), Postives = 128/207 (61.84%), Query Frame = 3

Query:    3 QFRSKYMTAEEIENILRMQHAATHGNDPYVDDYYHQARLAKKAAESGSKHRFCPVNPKXXXXXXXXXXXXXXXXXHVDALG-ISFSCIRRPRPLLEVD-PPSSAFGNGTEQVSEKPLEEEPMLAARITIEXXXXXXXXXXXXXXXXQFSQPQDGGANLRRKRHILLEGLATSLQLVDPLGKSGNPDGLGPKDDIGVLTISFSTKGPK 617
            QFRSK+MT+EEIE+IL+MQH+ +H NDPYV+DYYHQA+LAKK+A S +   F P   K                 HVDALG I+   +RRP  LLEVD  P    G+G  + S K LE+EP++AAR+TIE                Q ++PQDGGA L+RKR ILLEGLAT+LQL DP  K+G   G+  KDDI  L I+   KG K
Sbjct:  366 QFRSKHMTSEEIESILKMQHSNSHSNDPYVNDYYHQAKLAKKSAGSKAISHFYPAQLK-DHQPRSRNSSEQHPQVHVDALGKITLPSVRRPHALLEVDSSPGFNDGSGDHKGSGKHLEQEPLVAARVTIEDALGVLIDIVDIDRTLQNTRPQDGGAQLKRKRQILLEGLATALQLADPFSKTGQKSGMTAKDDIVFLRIATLPKGRK 571

The following BLAST results are available for this feature:

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
BLAST of CF810422 vs. P. persica 1.0 peptide
BLAST of CF810422 vs. TrEMBL
BLAST of CF810422 vs. Vitis vinifera peptide
BLAST of CF810422 vs. TAIR peptide

BLAST of CF810422 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 5


Match Name	E-value	Identity
POPTR_0016s02130.1	4.995e-54	56.31	[more]
POPTR_0006s02270.1	3.237e-53	56.31	[more]
POPTR_0001s46190.1	7.212e-53	55.07	[more]
POPTR_0011s14710.1	2.741e-52	55.77	[more]
POPTR_0098s00230.1	4.838e-49	53.69	[more]

BLAST of CF810422 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
ppa001180m	2.478e-55	58.25		[more]
ppa002090m	1.606e-54	57.49		[more]

BLAST of CF810422 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A5C725\|A5C725_VITVI	3.435e-55	60.19	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RI49\|B9RI49_RICCO	3.215e-53	56.52	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9S3M6\|B9S3M6_RICCO	1.351e-51	54.85	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9HD71\|B9HD71_POPTR	2.304e-51	56.80	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GJZ7\|B9GJZ7_POPTR	8.756e-51	55.07	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9I0J7\|B9I0J7_POPTR	3.327e-50	55.77	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KEH3\|D7KEH3_ARALY	1.546e-47	54.85	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q5ZAQ3\|Q5ZAQ3_ORYSJ	4.972e-46	52.88	Os01g0769000 protein OS=Oryza sativa subsp. japoni...	[more]
A2ZY79\|A2ZY79_ORYSJ	4.972e-46	52.88	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A2WVH2\|A2WVH2_ORYSI	4.972e-46	52.88	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of CF810422 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01015721001	1.533e-21	79.31	assembled CDS	[more]

BLAST of CF810422 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G14990.1	3.376e-46	51.94	\| Symbols: \| Topoisomerase II-associated protein ...	[more]
AT1G79090.2	7.521e-46	51.46	\| Symbols: \| FUNCTIONS IN: molecular_function unk...	[more]
AT1G79090.1	7.521e-46	51.46	\| Symbols: \| FUNCTIONS IN: molecular_function unk...	[more]
AT3G22270.1	6.367e-45	49.76	\| Symbols: \| Topoisomerase II-associated protein ...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 5..16 score
None	No IPR available	PANTHER	PTHR21551	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	coord: 1..177 score: 2.3
None	No IPR available	SEG	seg	seg	coord: 59..75 score: NAcoord: 129..144 score
None	No IPR available	SEG	seg	seg	coord: 4..36 score: NAcoord: 49..58 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF810422 ID=CF810422; Name=CF810422; organism=Vaccinium corymbosum; type=EST; length=628bp
CACAGTTCAGATCCAAGTACATGACTGCTGAAGAAATAGAGAATATTCTC
AGAATGCAACACGCTGCAACACATGGGAACGATCCGTATGTAGATGATTA
TTATCACCAAGCTCGCCTTGCAAAAAAAGCTGCTGAATCGGGATCAAAAC
ACCGTTTCTGCCCTGTCAACCCAAAGGAGCTTCCGTCTCGATCACGTAAT
AGTTCAGAATCATCACATCCTCATCTCCATGTTGATGCACTTGGTATCTC
CTTCTCTTGCATAAGAAGGCCACGTCCTCTCCTTGAAGTGGACCCTCCTT
CCTCTGCTTTTGGCAATGGGACTGAACAAGTGTCTGAGAAGCCACTTGAA
GAGGAACCAATGCTTGCGGCTAGAATCACTATCGAAGATGGTCTTTGTCT
TCTCCTTGATGTGGATGACATTGACCGCCTCCTACAATTTAGTCAACCCC
AAGATGGTGGGGCCAATCTCAGGCGTAAGCGACATATCCTTTTAGAAGGC
CTGGCTACCTCACTTCAACTTGTTGACCCACTTGGGAAAAGTGGGAACCC
TGATGGGCTGGGCCCCAAAGACGACATTGGGGTTCTTACGATTAGTTTCT
CTACCAAAGGGCCGAAAGCTCCTTTCTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated