CF810484
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF810484 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0011s12200.1 () HSP 1 Score: 53.5286 bits (127), Expect = 1.123e-7 Identity = 47/148 (31.76%), Postives = 66/148 (44.59%), Query Frame = 2 Query: 140 VGDYVLPTFPTLRNLTHLRLLSGVNIGNSGXXXXXXXXXXX-CSPNLEVLVLEGKRCSSTKSWGPPLRVPHCLLFRLKEVEFRPSLGRKALEFEL-DFEVIKYLLKSAEVLKKMTIR---SQLLD-----SRQIAQFPRASKACIISF 553 + D V P + NL + L+ + I SG CSP LEV +L T W P VP CL LK +E+ E EL + E+ +YL+K+A VL+KMTI + D + ++ + R S AC I F Sbjct: 319 LSDAVHKKLPCVGNLPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLEVFILYKDSTEKTPRWRNPEFVPRCLRSSLKVIEY------VGFESELGEIEMAEYLIKNALVLEKMTIEYGWKMIHDFKERVAERLTECRRGSTACRIVF 460
BLAST of CF810484 vs. P. persica 1.0 peptide
Match: ppa020362m () HSP 1 Score: 59.3066 bits (142), Expect = 1.449e-9 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 14 SLENLSSLLEAHFEIDLPIHLTNILTLLRGIANVKCLRF---HAKVGDYVLPTFPTLRNLTHLRL------LSGVNIGNSGXXXXXXXXXXXCSPNLEVLVLEGKRCSSTKS----WGPPLRVPHCLLFRLKEVEFRPSLGRKALEFELDFEVIKYLLKSAEVLKKMTIRS----QLLDSRQ-IAQFPRASKACIISFK 556 SL N + E ++ D + + LL GI+NVK L + + G+ LP FP L L + L V + N+ PNLE L LE K W PP VP+CL+ LK + P G+K +D E+ +YLL + +L K+T+ + LD R+ + +F RAS C + +K Sbjct: 257 SLVNANIDFEDYYFADRASLPKHAIALLAGISNVKYLSLKTSYLRAGE--LPFFPNLNKLKVVVYRCKYWDLLAVLLENA--------------PNLEDLDLEDGTMRDEKHSKLHWKPPKVVPNCLMSHLKTITLCPFRGQK-----IDMELAEYLLNNGHLLDKITLYASYFWHTLDVRRALPKFNRASMTCQVEYK 434
BLAST of CF810484 vs. P. persica 1.0 peptide
Match: ppa022187m () HSP 1 Score: 58.5362 bits (140), Expect = 2.472e-9 Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 266 SPNLEVLVLEGKRCSSTKSWGPPLRVPHCLLFRLKEVEFRPSLGRKALEFELDFEVIKYLLKSAEVLKKMTIRSQLLDSRQIAQFPRASKACIISF 553 SPNLE LV+E K + W P VP CL+ LK + R G + + ++ KYLLK +VL KMTI + L +++ + RASKAC + F Sbjct: 33 SPNLEYLVVEHK-----ERWRKPESVPVCLISHLKTITIRGFKG-----YPHEEKLAKYLLKEGQVLSKMTIYNDL--AKEFSMSQRASKACRVEF 116
BLAST of CF810484 vs. TrEMBL
Match: A5BLF6|A5BLF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040899 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.243e-13 Identity = 61/172 (35.47%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 83 ILTLLRGIANVKCLRF--------HAKVGDYVLPTFPTLRNLTHLRLLSGVNIGNSGXXXXXXXXXXXCSPNLEVLVLEGKRCSST--KSWGPPLRVPHCLLFRLKEVEFRPSLGRKALEFELDFEVIKYLLKSAEVLKKMTI--RSQLLDS-----RQIAQFPRASKACII 547 I LL I+NVKCL +GDY LPTF N+T L L IG G SPNLE LV+E + + W PL+VP CL+ LKE+E R +G + + E ++YLLK+AEVL++MTI +D +++ PR S++C + Sbjct: 296 IYELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTF---HNMTRLEFLF---IG--GFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGE-----DYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKLLGLPRGSRSCFV 454
BLAST of CF810484 vs. TrEMBL
Match: D7TQZ6|D7TQZ6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_93.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038076001 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.608e-11 Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 2 Query: 5 EGFSLENLSSLLEAHFEI--------DLPIHLTNILTLLRGIANVKCLRF-----HAKVGDYVLPTFPTLRNLTHLRLLSGVNIGNSGXXXXXXXXXXXCSPNLEVLVLEG--KRCSSTKSWGPPLRVPHCLLFRLKEVEFRPSLGRKALEFELDFEVIKYLLKSAEVLKKMTI-------RSQLLDSRQIAQFPRASKACIIS 550 E + + NLSSL++A+ + D ++ I LLRGI+NVK L H+ G + P ++T L L G SPNLE+L+LE K + W PL+VP C+ L EVE + G L++EL I++LLK+A VLKKM+I + ++++ F RAS +C S Sbjct: 206 EDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSGMFCGYELPAFHSVTRLELEVDYGYG-----LEFLKEFLDTSPNLEILILENVNKDECEIEEWTLPLQVPTCVELHLNEVEIKKFDG---LDYELG--AIEFLLKNARVLKKMSIDCRDWRDGQEFCVCKKLSGFTRASMSCEFS 399
BLAST of CF810484 vs. Vitis vinifera peptide
Match: GSVIVT01038076001 (assembled CDS) HSP 1 Score: 73.1738 bits (178), Expect = 8.302e-14 Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 2 Query: 5 EGFSLENLSSLLEAHFEI--------DLPIHLTNILTLLRGIANVKCLRF-----HAKVGDYVLPTFPTLRNLTHLRLLSGVNIGNSGXXXXXXXXXXXCSPNLEVLVLEG--KRCSSTKSWGPPLRVPHCLLFRLKEVEFRPSLGRKALEFELDFEVIKYLLKSAEVLKKMTI-------RSQLLDSRQIAQFPRASKACIIS 550 E + + NLSSL++A+ + D ++ I LLRGI+NVK L H+ G + P ++T L L G SPNLE+L+LE K + W PL+VP C+ L EVE + G L++EL I++LLK+A VLKKM+I + ++++ F RAS +C S Sbjct: 206 EDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSGMFCGYELPAFHSVTRLELEVDYGYG-----LEFLKEFLDTSPNLEILILENVNKDECEIEEWTLPLQVPTCVELHLNEVEIKKFDG---LDYELG--AIEFLLKNARVLKKMSIDCRDWRDGQEFCVCKKLSGFTRASMSCEFS 399
BLAST of CF810484 vs. TAIR peptide
Match: AT3G49030.1 (| Symbols: | FBD, F-box and Leucine Rich Repeat domains containing protein | chr3:18173138-18174769 FORWARD LENGTH=443) HSP 1 Score: 51.9878 bits (123), Expect = 2.878e-7 Identity = 52/193 (26.94%), Postives = 83/193 (43.01%), Query Frame = 2 Query: 17 LENLSSLLEAHFEIDLPIHLTNILTLLRGIANVKCLRFHAKVGDYVLPTFPTLRNLTHLRLLSGVNIGNSGXXXXXXXXXXXCSPNLEVLVLEGKRCSST----KSWGPPLRVPHCLLFRLKEVEFRPSLGRKALEFELDFEVIKYLLKSAEVLKKMTIRSQLLD----------SRQIAQFPRASKACIISF 553 +EN L+EA EI H+ N +L + +VK L + + PT L +L +L+ SP L++L L G C ++W PP VP CLLF L++ + ++ E EV Y+L++A +LKK T ++ +D ++A RAS +C + F Sbjct: 261 IENAPELVEA--EISDVSHIANE-NILESLTSVKRLSLESPI-KIKFPTGKVFDQLVYLDVLT-----KEREWWNLLSRMLESSPKLQILKLTGLSCIEKGLDGQNWNPPKCVPECLLFHLEKFLWTGYEWQRGDE----KEVATYILENARLLKKATFSTKRIDLENLEKRREMLNELASVARASDSCHLVF 440 The following BLAST results are available for this feature:
BLAST of CF810484 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CF810484 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of CF810484 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CF810484 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CF810484 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF810484 ID=CF810484; Name=CF810484; organism=Vaccinium corymbosum; type=EST; length=600bpback to top |