CF810743
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF810743 vs. DB:swissprot:display
Match: PP331_ARATH (Pentatricopeptide repeat-containing protein At4g21170 OS=Arabidopsis thaliana GN=At4g21170 PE=2 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 5.576e-10 Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 218 RHNWAPLLRTLN--LSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRG 514 R NW L+ + L S LT +FL ILR+T+ P+ +L FF++AK+ L FEPDLK+ + E+ SGL +A+ +L L++ N + +V R G Sbjct: 48 RRNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEMHRWFEG 148
BLAST of CF810743 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s02020.1 () HSP 1 Score: 95.5153 bits (236), Expect = 2.701e-20 Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 218 RHNWAPLLRTLNLSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRG 514 RHNW LL+ NLS+ +LTP LF IL KT+TNPQ+SL FFNW +++L +PDLK+ + I + SGL+ +P++D+L+K + + + + V +CRG Sbjct: 34 RHNWVSLLQNFNLST-KLTPPLFNQILHKTQTNPQISLRFFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGEAMVDSCRG 131
BLAST of CF810743 vs. P. persica 1.0 peptide
Match: ppa018797m () HSP 1 Score: 110.153 bits (274), Expect = 7.501e-25 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 2 Query: 152 LNWRXXXXXXXXXXXXXXXXXXRHNWAPLLRTLNLSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRGS 517 L+WR R NW PLLR L+L +LTP+LFL IL KT+ NPQVSL FFNWAK +L FEPDLK+ + + +GSGL R KP+LD+LI+ +P + +V C+G+ Sbjct: 17 LSWRTNIKQAQLASQISYALLQRRNWVPLLRNLSLFP-KLTPALFLQILHKTQNNPQVSLEFFNWAKVNLRFEPDLKSNCQIIRVSLGSGLVRPVKPILDSLIQTHPVSELVQCITLACKGT 137
BLAST of CF810743 vs. TrEMBL
Match: B9RXQ8|B9RXQ8_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0905670 PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.838e-21 Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 152 LNWRXXXXXXXXXXXXXXXXXXRHNWAPLLRTLNLSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRG 514 ++WR R+NW PLL+ LNLSS +LTP LF IL KT+T+ Q+SL+FFNWAK++L F PDLK+ + ++ +GS L R AK +LD+LIK P + + V+ CRG Sbjct: 41 ISWRTRIQQNQLVSEISTILLQRNNWIPLLQNLNLSS-KLTPFLFFQILHKTQTHAQISLNFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSNLFLETMVQACRG 160
BLAST of CF810743 vs. TrEMBL
Match: B9H1G1|B9H1G1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_758454 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.244e-18 Identity = 45/99 (45.45%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 218 RHNWAPLLRTLNLSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRG 514 RHNW LL+ NLS+ +LTP LF IL KT+TNPQ+SL FFNW +++L +PDLK+ + I + SGL+ +P++D+L+K + + + + V +CRG Sbjct: 34 RHNWVSLLQNFNLST-KLTPPLFNQILHKTQTNPQISLRFFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGEAMVDSCRG 131
BLAST of CF810743 vs. TrEMBL
Match: D7MFE5|D7MFE5_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658006 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.046e-8 Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 218 RHNWAPLLRTLN--LSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRG 514 R NW L+ + L S LT +FL I+R+T+ P+ +L FF++AK+ L FEPDLK+ + E+ SGL +A+ +L L++ + + +V S R G Sbjct: 48 RRNWISHLQYVKSKLPRSTLTSPIFLQIIRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVSLVVGSMHRWFEG 148
BLAST of CF810743 vs. TAIR peptide
Match: AT4G21170.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11286756-11288513 REVERSE LENGTH=551) HSP 1 Score: 64.3142 bits (155), Expect = 5.800e-11 Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 218 RHNWAPLLRTLN--LSSSQLTPSLFLHILRKTKTNPQVSLSFFNWAKSSLGFEPDLKTLVTLSEILIGSGLSRQAKPVLDALIKDNPPTRIVNSAVRTCRG 514 R NW L+ + L S LT +FL ILR+T+ P+ +L FF++AK+ L FEPDLK+ + E+ SGL +A+ +L L++ N + +V R G Sbjct: 48 RRNWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEMHRWFEG 148 The following BLAST results are available for this feature:
BLAST of CF810743 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot) Total hits: 1
BLAST of CF810743 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CF810743 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CF810743 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 3
BLAST of CF810743 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF810743 ID=CF810743; Name=CF810743; organism=Vaccinium corymbosum; type=EST; length=614bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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